Effective results for Streptococcus pneumoniae TIGR4 (eggnog40)
Summary
Number of putative secreted proteins: 773
- Predicted by T4SEpre: 183
- Predicted by EffectiveELD: 218 eukaryotic-like domains, contained in 641 proteins (76 high, 565 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type IV)
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
| Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
|---|---|---|---|---|---|
| 170187.SP_1960 | (PF04998) (PF04983) (PF04997) (PF00623) (PF05000) | (mitochondrial) | |||
| 170187.SP_1961 | (PF04561) (PF10385) (PF04565) (PF00562) (PF04563) (PF04560) | ||||
| 170187.SpneT_02000019 | (PF04998) (PF04983) (PF04997) (PF00623) (PF05000) | (mitochondrial) | |||
| 170187.SpneT_02000020 | (PF04561) (PF10385) (PF04565) (PF00562) (PF04563) (PF04560) | ||||
| 170187.SP_1759 | (PF07517) (PF01043) (PF07516) | mitochondrial | |||
| 170187.SpneT_02001366 | + | (PF14714) (PF01926) | (mitochondrial); (plastid) | ||
| 170187.SpneT_02000596 | (PF07517) (PF01043) (PF07516) | (mitochondrial) | |||
| 170187.SP_1709 | + | (PF14714) (PF01926) | (mitochondrial); (plastid) | ||
| 170187.SpneT_02000746 | + | (PF01813) | (mitochondrial) | ||
| 170187.SP_1687 | (PF13088) PF02012 | ER | |||
| 170187.SP_0085 | (PF01479) (PF00163) | (mitochondrial) | |||
| 170187.SP_0969 | (PF01926) (PF07650) | (mitochondrial) | |||
| 170187.SpneT_02001144 | (PF00013) (PF03726) | ER | |||
| 170187.SP_0314 | (PF08124) (PF02884) | ER | |||
| 170187.SP_1315 | + | (PF01813) | (mitochondrial) | ||
| 170187.SP_1326 | (PF13088) PF02012 | ER | |||
| 170187.SpneT_02001834 | (PF01479) (PF00163) | (mitochondrial) | |||
| 170187.SP_0212 | (PF03947) (PF00181) | (mitochondrial) | |||
| 170187.SpneT_02000858 | (PF01926) (PF07650) | (mitochondrial) | |||
| 170187.SpneT_02000735 | (PF13088) PF02012 | ER | |||
| 170187.SpneT_02001132 | (PF01409) (PF02912) | ER | |||
| 170187.SpneT_02000095 | (PF03947) (PF00181) | (mitochondrial) | |||
| 170187.SP_0630 | (PF00298) (PF03946) | (mitochondrial) | |||
| 170187.SpneT_02001921 | (PF00298) (PF03946) | (mitochondrial) | |||
| 170187.SP_0181 | (PF02517) | ER | |||
| 170187.SP_0345 | + | (mitochondrial) | |||
| 170187.SP_1589 | (PF08245) | mitochondrial | |||
| 170187.SP_0981 | + | ER | |||
| 170187.SpneT_02001545 | (PF00230) | ER | |||
| 170187.SpneT_02000740 | (PF00137) | ER; (ER) | |||
| 170187.SP_2131 | (PF00359) | ER; (ER) | |||
| 170187.SpneT_02001906 | (PF02517) | mitochondrial | |||
| 170187.SP_1975 | (PF02096) | ER | |||
| 170187.SpneT_02000191 | (PF02875) (PF08245) | (ER) | |||
| 170187.SpneT_02001712 | + | ER | |||
| 170187.SpneT_02001482 | + | ER | |||
| 170187.SpneT_02001154 | (PF01895) | ER | |||
| 170187.SpneT_02001153 | (PF03644) | (mitochondrial) | |||
| 170187.SP_0369 | + | ER | |||
| 170187.SP_1763 | PF00344 | (ER) | |||
| 170187.SpneT_02001029 | + | ER | |||
| 170187.SP_0961 | (PF00453) | mitochondrial | |||
| 170187.SP_1784 | + | ER | |||
| 170187.SP_0098 | + | ER | |||
| 170187.SP_0092 | + | ER; (ER) | |||
| 170187.SP_0095 | (PF12368) | ER | |||
| 170187.SP_0892 | (PF04851) | (mitochondrial) | |||
| 170187.SP_0144 | (PF02517) | ER | |||
| 170187.SP_0149 | + | ER | |||
| 170187.SpneT_02000612 | + | ER | |||
| 170187.SpneT_02000813 | (PF01016) | mitochondrial; (mitochondrial) | |||
| 170187.SpneT_02000765 | (PF02517) | ER | |||
| 170187.SpneT_02000764 | (PF02517) | ER | |||
| 170187.SpneT_02001360 | (PF08245) | mitochondrial | |||
| 170187.SpneT_02001709 | PF09683 | ER | |||
| 170187.SP_2205 | (PF01368) | ER | |||
| 170187.SP_2201 | (PF05257) | mitochondrial; (mitochondrial) | |||
| 170187.SpneT_02001499 | (PF01479) | (mitochondrial) | |||
| 170187.SpneT_02000144 | + | ER | |||
| 170187.SpneT_02001491 | (PF08022) | ER | |||
| 170187.SpneT_02001635 | (PF02517) | ER | |||
| 170187.SP_0143 | (PF02517) | ER | |||
| 170187.SP_1174 | + | ER | |||
| 170187.SP_1778 | (PF00230) | ER | |||
| 170187.SP_0228 | (PF00327) | (mitochondrial) | |||
| 170187.SpneT_02000771 | (PF00453) | mitochondrial | |||
| 170187.SpneT_02001955 | (PF02517) | (ER); ER | |||
| 170187.SP_2216 | (PF05257) | ER | |||
| 170187.SP_0688 | (PF02875) (PF08245) | (ER) | |||
| 170187.SP_0304 | (PF04193) | ER | |||
| 170187.SP_0547 | (PF02517) | ER | |||
| 170187.SP_0230 | PF00344 | mitochondrial | |||
| 170187.SP_0545 | (PF02517) | ER | |||
| 170187.SP_1321 | (PF00137) | ER; (ER) | |||
| 170187.SP_0433 | (PF01029) | (mitochondrial) | |||
| 170187.SP_0431 | (PF02517) | (ER) | |||
| 170187.SpneT_02000948 | (PF04193) | ER | |||
| 170187.SP_0208 | PF00338 | (mitochondrial) | |||
| 170187.SpneT_02001769 | + | (mitochondrial) | |||
| 170187.SP_0930 | + | ER | |||
| 170187.SP_2169 | + | ER | |||
| 170187.SP_2184 | (PF00230) | ER | |||
| 170187.SpneT_02001284 | (PF07517) (PF01043) (PF07516) | ||||
| 170187.SpneT_02000138 | (PF02096) | ER | |||
| 170187.SP_0216 | PF00252 | mitochondrial; (mitochondrial) | |||
| 170187.SP_0581 | (PF03484) (PF03147) (PF01588) | ||||
| 170187.SP_0109 | PF09683 | ER | |||
| 170187.SP_0925 | (PF02517) | ER | |||
| 170187.SP_0926 | (PF00165) | ER | |||
| 170187.SpneT_02000818 | PF02916 | ER | |||
| 170187.SpneT_02000923 | (PF01029) | (mitochondrial) | |||
| 170187.SpneT_02000033 | (PF02096) | ER | |||
| 170187.SpneT_02000851 | (PF03848) | (mitochondrial) | |||
| 170187.SpneT_02000854 | (PF03840) | ER | |||
| 170187.SpneT_02001454 | + | ER; (ER) | |||
| 170187.SpneT_02001455 | (PF12368) | ER | |||
| 170187.SpneT_02000213 | (PF01479) | (mitochondrial) | |||
| 170187.SpneT_02001074 | (PF04851) | (mitochondrial) | |||
| 170187.SP_0977 | (PF03848) | (mitochondrial) | |||
| 170187.SP_0974 | (PF03840) | ER | |||
| 170187.SP_0464 | (PF05738) | ER | |||
| 170187.SP_0462 | (PF05738) | (mitochondrial) | |||
| 170187.SP_0463 | (PF05738) | ER | |||
| 170187.SP_0002 | + | mitochondrial; (mitochondrial) | |||
| 170187.SP_0007 | (PF01479) | (mitochondrial) | |||
| 170187.SpneT_02000840 | (PF05257) | ER | |||
| 170187.SpneT_02000119 | (PF00232) | ER | |||
| 170187.SpneT_02000592 | PF00344 | ER | |||
| 170187.SpneT_02001640 | (PF06280) | ER | |||
| 170187.SP_1874 | (PF01479) | (mitochondrial) | |||
| 170187.SP_0498 | (PF03644) | (mitochondrial) | |||
| 170187.SP_0496 | (PF01895) | ER | |||
| 170187.SpneT_02000696 | + | ER | |||
| 170187.SpneT_02001509 | (PF02517) | ER | |||
| 170187.SpneT_02000477 | (PF00886) | (mitochondrial); mitochondrial | |||
| 170187.SpneT_02001475 | (PF00230) | ER | |||
| 170187.SpneT_02001878 | (PF02517) | ER | |||
| 170187.SP_1284 | + | ER | |||
| 170187.SP_1514 | (PF00137) | ER | |||
| 170187.SP_0641 | (PF06280) | ER | |||
| 170187.SP_0645 | (PF00359) | (ER) | |||
| 170187.SP_0807 | + | ER | |||
| 170187.SP_0995 | + | (mitochondrial) | |||
| 170187.SP_2233 | + | (ER) | |||
| 170187.SpneT_02001315 | (PF01649) | (mitochondrial); (plastid) | |||
| 170187.SpneT_02001130 | (PF03484) (PF03147) (PF01588) | ||||
| 170187.SP_1491 | (PF00230) | (ER) | |||
| 170187.SP_1702 | (PF07517) (PF01043) (PF07516) | ||||
| 170187.SP_1332 | (PF02517) | ER | |||
| 170187.SpneT_02000847 | + | ER | |||
| 170187.SpneT_02000078 | PF00344 | (mitochondrial); (plastid) | |||
| 170187.SP_2041 | (PF02096) | ER | |||
| 170187.SpneT_02001411 | (PF00359) | ER; (ER) | |||
| 170187.SpneT_02000891 | (PF02517) | ER | |||
| 170187.SpneT_02000254 | (PF04525) | (mitochondrial) | |||
| 170187.SpneT_02000091 | PF00252 | mitochondrial; (mitochondrial) | |||
| 170187.SpneT_02000099 | PF00338 | (mitochondrial) | |||
| 170187.SpneT_02001125 | + | mitochondrial | |||
| 170187.SP_1240 | (PF02517) | (mitochondrial) | |||
| 170187.SP_0288 | (PF02517) | ER | |||
| 170187.SP_1891 | + | ER | |||
| 170187.SpneT_02000667 | + | ER | |||
| 170187.SpneT_02000408 | (PF02517) | ER | |||
| 170187.SpneT_02000082 | PF00861 | (mitochondrial) | |||
| 170187.SpneT_02000080 | (PF00327) | (mitochondrial) | |||
| 170187.SpneT_02001758 | (PF00230) | (ER) | |||
| 170187.SpneT_02000338 | + | ER | |||
| 170187.SpneT_02001112 | (PF05738) | ER | |||
| 170187.SpneT_02001111 | (PF05738) | ER | |||
| 170187.SpneT_02001118 | (PF00013) | ER | |||
| 170187.SP_1346 | (PF02517) | ER | |||
| 170187.SP_0299 | + | (mitochondrial) | |||
| 170187.SP_2047 | + | ER | |||
| 170187.SP_2021 | (PF00232) | ER | |||
| 170187.SP_2116 | (PF02517) | ER | |||
| 170187.SpneT_02000508 | PF03714 | (mitochondrial) | |||
| 170187.SP_1003 | + | ER | |||
| 170187.SP_1002 | + | ER | |||
| 170187.SP_0606 | (PF08022) | ER | |||
| 170187.SP_1739 | (PF00013) | ER | |||
| 170187.SP_1734 | (PF01029) | ER; (ER) | |||
| 170187.SP_1732 | + | mitochondrial | |||
| 170187.SP_0775 | (PF00886) | (mitochondrial); mitochondrial | |||
| 170187.SpneT_02001597 | + | ER | |||
| 170187.SP_0112 | + | ER | |||
| 170187.SpneT_02001353 | + | ER | |||
| 170187.SP_1219 | (PF00521) (PF03989) | ||||
| 170187.SpneT_02001006 | (PF03144) (PF06421) | ||||
| 170187.SP_1360 | (PF08544) (PF00288) | ||||
| 170187.SpneT_02000744 | (PF02874) (PF16886) | ||||
| 170187.SpneT_02000742 | + | (PF01992) | |||
| 170187.SpneT_02000290 | (PF13088) PF02012 | ||||
| 170187.SpneT_02001900 | (PF06418) | (mitochondrial) | |||
| 170187.SpneT_02000361 | + | (PF16326) | |||
| 170187.SP_0346 | PF02916 | (mitochondrial) | |||
| 170187.SP_1114 | + | (PF16326) | |||
| 170187.SpneT_02001168 | (PF00521) (PF03989) | ||||
| 170187.SpneT_02001165 | (PF00204) (PF00986) | ||||
| 170187.SP_1200 | (PF03144) (PF06421) | ||||
| 170187.SpneT_02001014 | (PF08544) (PF00288) | ||||
| 170187.SP_1979 | (PF00156) | (mitochondrial) | |||
| 170187.SP_0579 | (PF01409) (PF02912) | ||||
| 170187.SP_1969 | + | (mitochondrial) | |||
| 170187.SpneT_02000628 | (PF02744) (PF01087) | ||||
| 170187.SpneT_02000629 | (PF08544) (PF00288) | ||||
| 170187.SpneT_02000197 | (PF00215) | (ER) | |||
| 170187.SpneT_02001572 | (PF13177) | (mitochondrial) | |||
| 170187.SpneT_02001625 | (PF08544) (PF00288) | ||||
| 170187.SpneT_02001812 | + | PF00572 | |||
| 170187.SP_2207 | (PF00156) | (ER) | |||
| 170187.SP_2204 | (PF03948) (PF01281) | ||||
| 170187.SpneT_02001637 | (PF02875) (PF08245) | ||||
| 170187.SP_0227 | PF03719 PF00333 | ||||
| 170187.SP_0221 | PF00673 PF00281 | ||||
| 170187.SP_0229 | + | PF00828 | |||
| 170187.SP_1317 | (PF02874) (PF16886) | ||||
| 170187.SP_1319 | + | (PF01992) | |||
| 170187.SP_1950 | (PF05147) | (mitochondrial) | |||
| 170187.SpneT_02000974 | (PF00521) (PF03989) | ||||
| 170187.SpneT_02000808 | + | (PF16326) | |||
| 170187.SP_2214 | + | (PF00889) | |||
| 170187.SpneT_02001607 | (PF00133) (PF13603) | ||||
| 170187.SP_0290 | (PF02875) (PF08245) | ||||
| 170187.SP_1095 | (PF13793) (PF14572) | ||||
| 170187.SP_0235 | + | PF00411 | |||
| 170187.SP_0237 | (PF01196) | (mitochondrial) | |||
| 170187.SP_0236 | (PF01000) (PF01193) | ||||
| 170187.SpneT_02000028 | + | (mitochondrial) | |||
| 170187.SP_0051 | (PF02844) (PF02843) | ||||
| 170187.SpneT_02000837 | (PF03948) (PF01281) | ||||
| 170187.SpneT_02001615 | + | (PF00359) | |||
| 170187.SP_1553 | + | (PF16326) | |||
| 170187.SP_1521 | (PF02875) (PF08245) | ||||
| 170187.SP_0215 | PF00189 (PF07650) | ||||
| 170187.SP_0855 | (PF00521) (PF03989) | ||||
| 170187.SP_0852 | (PF00204) (PF00986) | ||||
| 170187.SP_1852 | (PF02744) (PF01087) | ||||
| 170187.SP_1853 | (PF08544) (PF00288) | ||||
| 170187.SP_0588 | (PF00013) (PF03726) | ||||
| 170187.SpneT_02000036 | (PF00156) | (mitochondrial) | |||
| 170187.SpneT_02001855 | (PF01336) (PF02938) | ||||
| 170187.SpneT_02000216 | (PF06071) (PF01926) | ||||
| 170187.SP_1530 | (PF02875) (PF08245) | ||||
| 170187.SP_0268 | PF03714 | (mitochondrial) | |||
| 170187.SP_1620 | + | (PF00359) | |||
| 170187.SP_0865 | (PF13177) | (mitochondrial) | |||
| 170187.SP_1990 | (PF13331) (PF13662) | ||||
| 170187.SP_0004 | (PF06071) (PF01926) | ||||
| 170187.SpneT_02000939 | (PF08124) (PF02884) | ||||
| 170187.SpneT_02000443 | (PF02875) (PF08245) | ||||
| 170187.SpneT_02001246 | (PF02744) (PF01087) | ||||
| 170187.SP_0494 | (PF06418) | (mitochondrial) | |||
| 170187.SP_0701 | (PF00215) | (ER) | |||
| 170187.SpneT_02000904 | (PF01926) (PF01018) | ||||
| 170187.SP_1287 | (PF02881) (PF02978) | ||||
| 170187.SP_1285 | + | (PF02527) | |||
| 170187.SpneT_02000306 | (PF02875) (PF08245) | ||||
| 170187.SP_0027 | (PF13793) (PF14572) | ||||
| 170187.SP_0806 | (PF00204) (PF00986) | ||||
| 170187.SpneT_02000047 | (PF13331) (PF13662) | ||||
| 170187.SpneT_02000261 | (PF03306) | (ER) | |||
| 170187.SP_1079 | (PF01926) (PF01018) | ||||
| 170187.SP_0254 | (PF00133) (PF13603) | ||||
| 170187.SP_1384 | (PF04525) | (mitochondrial) | |||
| 170187.SP_1670 | (PF02875) (PF08245) | ||||
| 170187.SP_0381 | (PF08544) (PF00288) | ||||
| 170187.SP_0382 | (PF08544) (PF00288) | ||||
| 170187.SpneT_02000079 | + | PF00828 | |||
| 170187.SpneT_02000074 | + | PF00411 | |||
| 170187.SpneT_02000073 | (PF01000) (PF01193) | ||||
| 170187.SpneT_02000072 | (PF01196) | (mitochondrial) | |||
| 170187.SpneT_02000092 | PF00189 (PF07650) | ||||
| 170187.SP_1392 | (PF03306) | (ER) | |||
| 170187.SpneT_02000668 | (PF00204) (PF00986) | ||||
| 170187.SpneT_02000409 | (PF04851) (PF12344) | ||||
| 170187.SpneT_02000888 | (PF00383) | (mitochondrial) | |||
| 170187.SpneT_02000178 | (PF01715) | (mitochondrial) | |||
| 170187.SpneT_02000244 | + | (PF00889) | |||
| 170187.SpneT_02001337 | (PF01154) (PF08540) | ||||
| 170187.SpneT_02001626 | (PF08544) (PF00288) | ||||
| 170187.SpneT_02000086 | PF00673 PF00281 | ||||
| 170187.SpneT_02000081 | PF03719 PF00333 | ||||
| 170187.SpneT_02001207 | (PF13793) (PF14572) | ||||
| 170187.SpneT_02000339 | + | (PF02527) | |||
| 170187.SP_1727 | (PF01154) (PF08540) | ||||
| 170187.SP_1238 | (PF04851) (PF12344) | ||||
| 170187.SpneT_02001529 | (PF13793) (PF14572) | ||||
| 170187.SP_0294 | + | PF00572 | |||
| 170187.SP_0838 | (PF01649) | (mitochondrial) | |||
| 170187.SpneT_02000452 | (PF02875) (PF08245) | ||||
| 170187.SP_2114 | (PF01336) (PF02938) | ||||
| 170187.SpneT_02000341 | (PF02881) (PF02978) | ||||
| 170187.SpneT_02001108 | + | (PF01610) | |||
| 170187.SP_1829 | (PF02744) (PF01087) | ||||
| 170187.SpneT_02000427 | (PF02844) (PF02843) | ||||
| 170187.SP_1348 | + | ||||
| 170187.SP_1105 | (PF00829) | ||||
| 170187.SP_1107 | (PF01016) | ||||
| 170187.SpneT_02001170 | + | ||||
| 170187.SpneT_02001173 | (PF01470) | ||||
| 170187.SpneT_02001177 | (PF01351) | ||||
| 170187.SP_1692 | (PF01610) | ||||
| 170187.SP_0611 | (PF01368) | ||||
| 170187.SP_1749 | (PF01926) | ||||
| 170187.SP_0342 | + | ||||
| 170187.SP_0618 | (PF08459) | ||||
| 170187.SP_1744 | (PF02410) | ||||
| 170187.SpneT_02001007 | PF04991 | ||||
| 170187.SpneT_02001001 | + | ||||
| 170187.SP_1582 | (PF01610) | ||||
| 170187.SP_1966 | (PF00275) | ||||
| 170187.SP_1367 | PF04991 | ||||
| 170187.SpneT_02000011 | (PF05147) | ||||
| 170187.SP_0764 | (PF01180) | ||||
| 170187.SpneT_02001423 | (PF08282) | ||||
| 170187.SpneT_02000983 | (PF02110) | ||||
| 170187.SpneT_02000981 | (PF03070) | ||||
| 170187.SpneT_02000745 | (PF02874) | ||||
| 170187.SpneT_02000743 | (PF01990) | ||||
| 170187.SpneT_02000188 | (PF03144) | ||||
| 170187.SP_2138 | (PF13359) | ||||
| 170187.SpneT_02000563 | (PF03462) | ||||
| 170187.SpneT_02001347 | (PF00133) | ||||
| 170187.SpneT_02001903 | (PF01336) | ||||
| 170187.SP_2008 | (PF00584) | not used | |||
| 170187.SpneT_02000362 | (PF13735) | ||||
| 170187.SpneT_02000534 | (PF01926) | ||||
| 170187.SpneT_02001762 | (PF00275) | ||||
| 170187.SP_1020 | (PF03462) | ||||
| 170187.SP_1029 | + | ||||
| 170187.SpneT_02000245 | (PF01264) | ||||
| 170187.SpneT_02000248 | (PF01487) | ||||
| 170187.SP_1118 | PF03714 | ||||
| 170187.SP_1110 | (PF01687) | ||||
| 170187.SP_1212 | (PF01509) | ||||
| 170187.SP_0372 | + | ||||
| 170187.SP_1208 | (PF00485) | ||||
| 170187.SP_1757 | + | ||||
| 170187.SP_1192 | (PF02502) | ||||
| 170187.SP_0976 | (PF01668) | ||||
| 170187.SP_1970 | (PF03590) | ||||
| 170187.SP_1973 | (PF08032) | ||||
| 170187.SP_0975 | + | ||||
| 170187.SP_0971 | (PF01121) | ||||
| 170187.SP_0578 | (PF00232) | ||||
| 170187.SP_0575 | (PF04851) | ||||
| 170187.SP_1377 | (PF01487) | ||||
| 170187.SP_1374 | (PF01264) | ||||
| 170187.SP_1371 | (PF00275) | ||||
| 170187.SP_0403 | (PF01351) | ||||
| 170187.SP_0400 | (PF05697) | ||||
| 170187.SpneT_02000996 | (PF01509) | ||||
| 170187.SpneT_02000998 | (PF00485) | ||||
| 170187.SpneT_02000758 | (PF01610) | ||||
| 170187.SpneT_02000756 | (PF00814) | ||||
| 170187.SpneT_02000754 | (PF00814) | ||||
| 170187.SpneT_02000198 | (PF00156) | ||||
| 170187.SpneT_02000193 | + | ||||
| 170187.SP_1999 | + | ||||
| 170187.SpneT_02001579 | (PF01588) | ||||
| 170187.SpneT_02000571 | + | ||||
| 170187.SpneT_02001806 | (PF05697) | ||||
| 170187.SpneT_02001370 | (PF03477) | ||||
| 170187.SpneT_02000374 | (PF01926) | ||||
| 170187.SpneT_02001487 | (PF05147) | ||||
| 170187.SpneT_02000179 | (PF01926) | ||||
| 170187.SpneT_02001152 | (PF00162) | ||||
| 170187.SP_1765 | PF01501 | ||||
| 170187.SP_1766 | PF01501 | ||||
| 170187.SP_1767 | PF01501 | ||||
| 170187.SP_1568 | (PF01926) | ||||
| 170187.SP_0964 | (PF01180) | ||||
| 170187.SP_0967 | (PF02130) | ||||
| 170187.SP_0966 | + | ||||
| 170187.SP_0960 | (PF01632) | ||||
| 170187.SP_0568 | (PF00133) | ||||
| 170187.SP_0895 | (PF01336) | ||||
| 170187.SP_0781 | + | ||||
| 170187.SP_0780 | (PF03477) | ||||
| 170187.SP_0782 | (PF02229) | ||||
| 170187.SP_0788 | (PF01588) | ||||
| 170187.SP_0415 | + | ||||
| 170187.SP_0411 | (PF02403) | ||||
| 170187.SP_1944 | (PF02367) | ||||
| 170187.SpneT_02000815 | (PF00829) | ||||
| 170187.SpneT_02000768 | (PF01180) | ||||
| 170187.SpneT_02000767 | + | ||||
| 170187.SpneT_02001813 | PF00380 | ||||
| 170187.SpneT_02001367 | + | ||||
| 170187.SpneT_02001369 | + | ||||
| 170187.SpneT_02000812 | (PF01687) | ||||
| 170187.SpneT_02001817 | (PF13088) | ||||
| 170187.SpneT_02001964 | (PF00359) | ||||
| 170187.SP_2208 | (PF04851) | ||||
| 170187.SpneT_02000383 | (PF00156) | ||||
| 170187.SpneT_02001633 | (PF08282) | ||||
| 170187.SP_1170 | + | ||||
| 170187.SP_1175 | + | ||||
| 170187.SpneT_02001386 | (PF00137) | not used | |||
| 170187.SpneT_02001382 | (PF02874) | ||||
| 170187.SpneT_02001380 | (PF02874) | ||||
| 170187.SP_0319 | (PF02502) | ||||
| 170187.SP_1771 | PF01501 | ||||
| 170187.SP_1770 | PF01501 | ||||
| 170187.SP_1577 | (PF00156) | ||||
| 170187.SpneT_02001037 | (PF00232) | ||||
| 170187.SP_0959 | (PF00707) | ||||
| 170187.SP_1792 | (PF01610) | ||||
| 170187.SP_0226 | PF00861 | ||||
| 170187.SP_0224 | PF00410 | ||||
| 170187.SP_0225 | PF00347 | ||||
| 170187.SP_0552 | (PF02576) | ||||
| 170187.SP_0209 | PF00297 | ||||
| 170187.SP_1318 | (PF01990) | ||||
| 170187.SP_0636 | + | ||||
| 170187.SP_0427 | + | ||||
| 170187.SpneT_02001790 | + | ||||
| 170187.SP_0046 | (PF00156) | ||||
| 170187.SP_0045 | (PF13507) | ||||
| 170187.SpneT_02000609 | + | ||||
| 170187.SpneT_02000976 | (PF02110) | ||||
| 170187.SpneT_02000972 | (PF04851) | ||||
| 170187.SpneT_02000772 | (PF01632) | ||||
| 170187.SpneT_02000773 | (PF00707) | ||||
| 170187.SP_2144 | (PF06824) | ||||
| 170187.SpneT_02000804 | PF03714 | ||||
| 170187.SpneT_02000559 | (PF01926) | ||||
| 170187.SpneT_02001953 | (PF01479) | ||||
| 170187.SP_2215 | (PF00318) | ||||
| 170187.SpneT_02000157 | (PF01470) | ||||
| 170187.SP_0303 | (PF00232) | ||||
| 170187.SP_0307 | (PF00359) | ||||
| 170187.SP_1541 | (PF01250) | ||||
| 170187.SP_1542 | (PF01336) | ||||
| 170187.SP_0234 | PF00416 | ||||
| 170187.SP_0239 | (PF05167) | ||||
| 170187.SP_1322 | (PF01496) | ||||
| 170187.SpneT_02000029 | (PF03590) | ||||
| 170187.SP_0439 | (PF03144) | ||||
| 170187.SP_1438 | + | ||||
| 170187.SP_0127 | (PF00814) | ||||
| 170187.SP_0129 | (PF00814) | ||||
| 170187.SP_0945 | (PF01765) | ||||
| 170187.SP_0941 | (PF13359) | ||||
| 170187.SpneT_02000109 | + | ||||
| 170187.SpneT_02000949 | (PF00232) | ||||
| 170187.SpneT_02000945 | (PF00359) | ||||
| 170187.SpneT_02000701 | (PF08282) | ||||
| 170187.SpneT_02000700 | (PF02517) | ||||
| 170187.SP_1344 | (PF05147) | ||||
| 170187.SpneT_02000018 | + | ||||
| 170187.SpneT_02000833 | (PF04851) | ||||
| 170187.SpneT_02000836 | (PF01368) | ||||
| 170187.SpneT_02000834 | (PF00156) | ||||
| 170187.SpneT_02000493 | (PF03462) | ||||
| 170187.SP_2221 | + | ||||
| 170187.SpneT_02000128 | + | ||||
| 170187.SpneT_02000123 | + | ||||
| 170187.SpneT_02001614 | (PF00359) | ||||
| 170187.SpneT_02001611 | (PF00834) | ||||
| 170187.SP_1156 | (PF01351) | ||||
| 170187.SP_1155 | (PF01926) | ||||
| 170187.SpneT_02000238 | + | ||||
| 170187.SP_0334 | (PF01795) | ||||
| 170187.SP_1554 | (PF13735) | ||||
| 170187.SP_1081 | (PF00275) | ||||
| 170187.SP_1086 | (PF13359) | ||||
| 170187.SP_0202 | (PF03477) | ||||
| 170187.SP_0207 | (PF00485) | ||||
| 170187.SP_1880 | + | ||||
| 170187.SP_1334 | + | ||||
| 170187.SP_0844 | (PF00383) | ||||
| 170187.SP_0936 | (PF13177) | ||||
| 170187.SP_0681 | (PF03144) | ||||
| 170187.SP_1428 | (PF05495) | ||||
| 170187.SP_0556 | (PF11987) | ||||
| 170187.SP_0557 | (PF02033) | ||||
| 170187.SP_0220 | (PF17136) | ||||
| 170187.SP_0553 | (PF13184) | ||||
| 170187.SP_1700 | + | ||||
| 170187.SP_1316 | (PF02874) | ||||
| 170187.SpneT_02000005 | (PF02367) | ||||
| 170187.SpneT_02000486 | (PF01180) | ||||
| 170187.SpneT_02001443 | + | ||||
| 170187.SpneT_02001282 | + | ||||
| 170187.SpneT_02000132 | (PF00215) | ||||
| 170187.SpneT_02000133 | (PF00359) | ||||
| 170187.SpneT_02001199 | + | ||||
| 170187.SpneT_02001663 | (PF00383) | ||||
| 170187.SpneT_02000226 | + | ||||
| 170187.SpneT_02000220 | + | ||||
| 170187.SP_0327 | (PF16889) | ||||
| 170187.SP_1522 | + | ||||
| 170187.SpneT_02001269 | (PF02502) | ||||
| 170187.SP_0219 | PF00238 | ||||
| 170187.SP_0218 | PF00366 | ||||
| 170187.SP_0217 | (PF00831) | ||||
| 170187.SP_0214 | (PF00237) | ||||
| 170187.SP_0213 | (PF00203) | ||||
| 170187.SP_0211 | PF00276 | ||||
| 170187.SP_0210 | (PF00573) | ||||
| 170187.SP_1959 | + | ||||
| 170187.SP_1184 | (PF00232) | ||||
| 170187.SP_1639 | (PF01610) | ||||
| 170187.SP_0929 | (PF01479) | ||||
| 170187.SP_1983 | (PF00834) | ||||
| 170187.SP_1984 | + | ||||
| 170187.SP_1457 | (PF08032) | ||||
| 170187.SP_0923 | (PF08282) | ||||
| 170187.SpneT_02000729 | (PF02517) | not used | |||
| 170187.SpneT_02000927 | + | ||||
| 170187.SpneT_02000031 | (PF08032) | ||||
| 170187.SpneT_02000589 | PF01501 | ||||
| 170187.SpneT_02000588 | PF01501 | ||||
| 170187.SpneT_02000853 | + | ||||
| 170187.SpneT_02000852 | (PF01668) | ||||
| 170187.SpneT_02000584 | PF01501 | ||||
| 170187.SpneT_02000456 | (PF01368) | ||||
| 170187.SpneT_02000100 | (PF00485) | ||||
| 170187.SpneT_02000108 | (PF08245) | ||||
| 170187.SpneT_02001292 | (PF00383) | ||||
| 170187.SpneT_02001672 | (PF00584) | not used | |||
| 170187.SpneT_02001184 | (PF02403) | ||||
| 170187.SpneT_02000215 | (PF01195) | ||||
| 170187.SpneT_02001071 | (PF01336) | ||||
| 170187.SpneT_02001075 | + | not used | |||
| 170187.SpneT_02001079 | + | ||||
| 170187.SP_1205 | + | ||||
| 170187.SP_1538 | (PF08282) | ||||
| 170187.SP_1534 | (PF01368) | ||||
| 170187.SpneT_02001277 | (PF00232) | ||||
| 170187.SpneT_02001270 | (PF02502) | ||||
| 170187.SP_0260 | (PF06042) | ||||
| 170187.SP_0265 | (PF00232) | ||||
| 170187.SP_1625 | (PF03596) | ||||
| 170187.SP_1195 | (PF13359) | ||||
| 170187.SP_1626 | PF00312 | ||||
| 170187.SP_1193 | (PF02502) | ||||
| 170187.SP_1198 | (PF00359) | ||||
| 170187.SP_0860 | (PF01470) | ||||
| 170187.SP_1847 | (PF00156) | ||||
| 170187.SP_0460 | (PF01610) | ||||
| 170187.SP_1997 | (PF08282) | ||||
| 170187.SP_0917 | + | ||||
| 170187.SP_1445 | (PF00958) | ||||
| 170187.SP_1444 | (PF01610) | ||||
| 170187.SP_0005 | (PF01195) | ||||
| 170187.SP_0716 | (PF03070) | ||||
| 170187.SP_0717 | (PF02110) | ||||
| 170187.SP_0713 | (PF01336) | ||||
| 170187.SpneT_02000739 | (PF01496) | ||||
| 170187.SpneT_02000930 | (PF06414) | ||||
| 170187.SpneT_02000024 | (PF00275) | ||||
| 170187.SpneT_02001517 | (PF02033) | ||||
| 170187.SpneT_02001516 | (PF11987) | ||||
| 170187.SpneT_02001513 | (PF13184) | ||||
| 170187.SpneT_02001512 | (PF02576) | ||||
| 170187.SpneT_02000440 | + | ||||
| 170187.SpneT_02001464 | (PF16889) | ||||
| 170187.SpneT_02000590 | PF01501 | ||||
| 170187.SpneT_02000598 | + | ||||
| 170187.SpneT_02001861 | (PF16320) | ||||
| 170187.SpneT_02001860 | (PF00466) | ||||
| 170187.SpneT_02001889 | + | not used | |||
| 170187.SpneT_02001648 | (PF05066) | ||||
| 170187.SpneT_02000209 | (PF00156) | ||||
| 170187.SP_1291 | (PF08282) | ||||
| 170187.SP_1292 | PF02037 | ||||
| 170187.SP_1293 | (PF01245) | ||||
| 170187.SP_1298 | (PF01368) | ||||
| 170187.SP_1051 | (PF06414) | ||||
| 170187.SP_1508 | (PF02874) | ||||
| 170187.SpneT_02001244 | PF08975 | ||||
| 170187.SpneT_02001248 | (PF01368) | ||||
| 170187.SP_0271 | (PF00164) | ||||
| 170187.SP_0273 | (PF03144) | ||||
| 170187.SP_0272 | PF00177 | ||||
| 170187.SP_1616 | (PF00834) | ||||
| 170187.SP_1619 | (PF00359) | ||||
| 170187.SP_0477 | (PF00232) | ||||
| 170187.SP_0671 | (PF01715) | ||||
| 170187.SP_1278 | (PF00156) | ||||
| 170187.SP_0672 | (PF01926) | ||||
| 170187.SP_1274 | PF04991 | ||||
| 170187.SP_1273 | PF04991 | ||||
| 170187.SP_0499 | (PF00162) | ||||
| 170187.SP_0493 | (PF05066) | ||||
| 170187.SP_0012 | (PF00156) | ||||
| 170187.SP_0879 | + | ||||
| 170187.SP_0877 | (PF00359) | ||||
| 170187.SP_1137 | + | ||||
| 170187.SP_1131 | + | ||||
| 170187.SpneT_02000550 | + | ||||
| 170187.SP_0702 | (PF00156) | ||||
| 170187.SpneT_02000697 | (PF01479) | ||||
| 170187.SpneT_02000691 | (PF13177) | ||||
| 170187.SpneT_02000053 | (PF08282) | ||||
| 170187.SpneT_02001505 | + | ||||
| 170187.SP_2088 | (PF01895) | ||||
| 170187.SpneT_02000473 | (PF01782) | ||||
| 170187.SpneT_02000472 | (PF01746) | ||||
| 170187.SpneT_02000471 | (PF03477) | ||||
| 170187.SpneT_02000470 | + | ||||
| 170187.SP_2068 | (PF00383) | ||||
| 170187.SP_2060 | (PF01470) | ||||
| 170187.SpneT_02001472 | (PF02502) | ||||
| 170187.SpneT_02001098 | + | ||||
| 170187.SpneT_02001094 | (PF06962) | ||||
| 170187.SP_1280 | (PF02620) | ||||
| 170187.SpneT_02000519 | + | not used | |||
| 170187.SP_1510 | (PF02874) | ||||
| 170187.SpneT_02000304 | (PF13662) | ||||
| 170187.SpneT_02000307 | + | ||||
| 170187.SpneT_02001258 | PF00312 | ||||
| 170187.SpneT_02001255 | (PF08459) | ||||
| 170187.SpneT_02001257 | (PF03596) | ||||
| 170187.SpneT_02001707 | + | ||||
| 170187.SP_1603 | (PF02224) | ||||
| 170187.SP_1269 | (PF01633) | ||||
| 170187.SP_0395 | (PF00359) | ||||
| 170187.SP_1263 | + | ||||
| 170187.SP_1262 | (PF01610) | ||||
| 170187.SpneT_02000623 | (PF00156) | ||||
| 170187.SP_0802 | + | ||||
| 170187.SpneT_02000915 | PF01501 | not used | |||
| 170187.SpneT_02000917 | (PF03144) | ||||
| 170187.SpneT_02000040 | (PF00834) | ||||
| 170187.SP_2099 | + | ||||
| 170187.SP_2079 | (PF13359) | ||||
| 170187.SpneT_02000469 | (PF02229) | ||||
| 170187.SpneT_02000464 | (PF01336) | ||||
| 170187.SpneT_02000460 | (PF08282) | ||||
| 170187.SpneT_02000463 | (PF01250) | ||||
| 170187.SpneT_02000860 | (PF02130) | ||||
| 170187.SpneT_02000861 | + | ||||
| 170187.SpneT_02000867 | (PF00359) | ||||
| 170187.SpneT_02000869 | + | ||||
| 170187.SpneT_02001314 | (PF00485) | ||||
| 170187.SpneT_02001310 | (PF00383) | ||||
| 170187.SP_1451 | (PF08282) | ||||
| 170187.SpneT_02000264 | (PF01895) | ||||
| 170187.SP_1127 | + | ||||
| 170187.SP_1072 | (PF13662) | ||||
| 170187.SpneT_02000314 | (PF01479) | ||||
| 170187.SpneT_02000310 | + | ||||
| 170187.SpneT_02001220 | + | ||||
| 170187.SpneT_02001226 | + | ||||
| 170187.SP_1382 | (PF09154) | ||||
| 170187.SP_0259 | (PF05491) | ||||
| 170187.SP_1672 | (PF13662) | ||||
| 170187.SpneT_02001136 | (PF04851) | ||||
| 170187.SpneT_02001133 | (PF00232) | ||||
| 170187.SpneT_02001231 | (PF01895) | ||||
| 170187.SP_0652 | (PF06962) | ||||
| 170187.SP_0380 | (PF05147) | ||||
| 170187.SP_0383 | (PF00288) | ||||
| 170187.SP_1928 | (PF13359) | ||||
| 170187.SpneT_02000316 | (PF00133) | ||||
| 170187.SP_0724 | (PF02110) | ||||
| 170187.SP_0722 | (PF03070) | ||||
| 170187.SpneT_02000672 | + | ||||
| 170187.SpneT_02000075 | PF00416 | ||||
| 170187.SpneT_02000070 | (PF05167) | ||||
| 170187.SpneT_02000417 | (PF04127) | ||||
| 170187.SpneT_02001417 | (PF00958) | ||||
| 170187.SpneT_02000897 | (PF13662) | ||||
| 170187.SpneT_02000789 | (PF01765) | ||||
| 170187.SpneT_02000784 | + | ||||
| 170187.SpneT_02000252 | (PF09154) | ||||
| 170187.SpneT_02000259 | (PF02873) | ||||
| 170187.SpneT_02001301 | (PF00232) | not used | |||
| 170187.SpneT_02000094 | (PF00203) | ||||
| 170187.SpneT_02000097 | (PF00573) | ||||
| 170187.SpneT_02000096 | PF00276 | ||||
| 170187.SpneT_02000090 | (PF00831) | ||||
| 170187.SpneT_02000093 | (PF00237) | ||||
| 170187.SpneT_02000098 | PF00297 | ||||
| 170187.SpneT_02000323 | (PF01633) | ||||
| 170187.SpneT_02000327 | PF04991 | ||||
| 170187.SpneT_02000328 | PF04991 | ||||
| 170187.SP_1390 | (PF02873) | ||||
| 170187.SP_1395 | (PF01895) | ||||
| 170187.SP_1669 | + | ||||
| 170187.SP_1662 | (PF01479) | ||||
| 170187.SP_1666 | + | ||||
| 170187.SpneT_02001123 | (PF01029) | ||||
| 170187.SpneT_02001120 | (PF01192) | ||||
| 170187.SpneT_02001121 | (PF04851) | ||||
| 170187.SP_1804 | + | ||||
| 170187.SP_1489 | (PF03144) | ||||
| 170187.SP_1246 | (PF08282) | ||||
| 170187.SP_1245 | (PF08282) | ||||
| 170187.SP_1244 | (PF02881) | ||||
| 170187.SP_1710 | + | ||||
| 170187.SP_1713 | (PF03477) | ||||
| 170187.SP_1248 | (PF14622) | ||||
| 170187.SP_0280 | (PF01479) | ||||
| 170187.SP_0286 | (PF08282) | ||||
| 170187.SP_0755 | (PF03462) | ||||
| 170187.SP_1712 | + | ||||
| 170187.SpneT_02000444 | + | ||||
| 170187.SpneT_02000856 | (PF01121) | ||||
| 170187.SpneT_02000402 | (PF08282) | ||||
| 170187.SpneT_02000403 | (PF08282) | ||||
| 170187.SpneT_02000400 | (PF14622) | ||||
| 170187.SpneT_02000404 | (PF02881) | ||||
| 170187.SpneT_02001428 | (PF08032) | ||||
| 170187.SpneT_02001934 | (PF03070) | ||||
| 170187.SpneT_02001425 | + | ||||
| 170187.SP_0690 | + | ||||
| 170187.SpneT_02000041 | + | ||||
| 170187.SpneT_02000795 | (PF06824) | ||||
| 170187.SpneT_02001157 | (PF04851) | ||||
| 170187.SpneT_02000242 | (PF05257) | ||||
| 170187.SpneT_02000243 | (PF00318) | ||||
| 170187.SpneT_02000533 | (PF01351) | ||||
| 170187.SpneT_02001336 | (PF00368) | ||||
| 170187.SpneT_02001681 | (PF02224) | ||||
| 170187.SpneT_02001687 | (PF00359) | ||||
| 170187.SpneT_02001686 | (PF00359) | ||||
| 170187.SpneT_02000087 | (PF17136) | ||||
| 170187.SpneT_02000084 | PF00410 | ||||
| 170187.SpneT_02000083 | PF00347 | ||||
| 170187.SpneT_02000088 | PF00238 | ||||
| 170187.SpneT_02000089 | PF00366 | ||||
| 170187.SP_1016 | (PF01926) | ||||
| 170187.SpneT_02000334 | (PF02620) | ||||
| 170187.SpneT_02000332 | (PF00156) | ||||
| 170187.SP_1659 | (PF00133) | ||||
| 170187.SpneT_02001110 | (PF05738) | ||||
| 170187.SP_0631 | PF00687 | ||||
| 170187.SpneT_02000422 | (PF13507) | ||||
| 170187.SP_1230 | (PF04127) | ||||
| 170187.SpneT_02000423 | (PF00156) | ||||
| 170187.SP_0538 | (PF13359) | ||||
| 170187.SP_1726 | (PF00368) | ||||
| 170187.SP_1729 | (PF13359) | ||||
| 170187.SP_1518 | + | ||||
| 170187.SpneT_02000583 | PF01501 | ||||
| 170187.SP_0295 | PF00380 | ||||
| 170187.SP_0836 | (PF01610) | ||||
| 170187.SP_0839 | (PF00485) | ||||
| 170187.SP_1830 | (PF01895) | ||||
| 170187.SP_0744 | (PF00383) | ||||
| 170187.SpneT_02000658 | + | ||||
| 170187.SP_2240 | + | ||||
| 170187.SpneT_02000104 | (PF03477) | ||||
| 170187.SpneT_02001927 | + | ||||
| 170187.SpneT_02001920 | PF00687 | ||||
| 170187.SpneT_02000507 | (PF00164) | ||||
| 170187.SpneT_02000506 | PF00177 | ||||
| 170187.SpneT_02000505 | (PF03144) | ||||
| 170187.SpneT_02001323 | (PF01926) | ||||
| 170187.SpneT_02001328 | (PF02410) | ||||
| 170187.SP_2026 | + | ||||
| 170187.SpneT_02001744 | (PF01588) | ||||
| 170187.SpneT_02001219 | (PF01479) | ||||
| 170187.SpneT_02001748 | + | ||||
| 170187.SP_1007 | + | ||||
| 170187.SpneT_02001695 | (PF01264) | not used | |||
| 170187.SpneT_02001692 | (PF00275) | ||||
| 170187.SpneT_02000345 | (PF08282) | ||||
| 170187.SpneT_02000346 | (PF01245) | ||||
| 170187.SP_0194 | + | ||||
| 170187.SP_0197 | (PF08245) | ||||
| 170187.SP_1737 | (PF01192) | ||||
| 170187.SP_1736 | (PF04851) | ||||
| 170187.SP_1221 | (PF04851) | ||||
| 170187.SP_1910 | (PF01588) | ||||
| 170187.SpneT_02001624 | (PF00288) | ||||
| 170187.SP_0510 | (PF04851) | ||||
| 170187.SP_1355 | (PF00466) | ||||
| 170187.SP_1354 | (PF16320) | ||||
| 170187.SP_1827 | PF08975 | ||||
| 170187.SP_0778 | (PF01782) | ||||
| 170187.SP_0779 | (PF01746) | ||||
| 170187.SP_0178 | (PF00383) | ||||
| 170187.SP_1453 | + | ||||
| 170187.SpneT_02001187 | + | ||||
| 170187.SpneT_02000649 | + | ||||
| 170187.SP_0396 | (PF00359) | ||||
| 170187.SP_2031 | + | ||||
| 170187.SP_2035 | (PF00215) | ||||
| 170187.SP_2036 | (PF00359) | ||||
| 170187.SpneT_02001919 | (PF03144) | ||||
| 170187.SP_2100 | (PF01479) | ||||
| 170187.SP_2102 | + | ||||
| 170187.SpneT_02001591 | (PF01795) | ||||
| 170187.SpneT_02000516 | (PF06042) | ||||
| 170187.SpneT_02000517 | (PF05491) | ||||
| 170187.SpneT_02000511 | (PF00232) | ||||
| 170187.SpneT_02000218 | + | ||||
| 170187.SpneT_02000351 | (PF01368) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- T4SEpre bpbAac predictions (T4SEpre_bpbAac_FinalResult.csv)
- T4SEpre psAac predictions (T4SEpre_psAac_FinalResult.csv)
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)
Genome based results
Summary
- Gram negative: NO (FDR = 0.5 %)
- Functional Type III secretion system: N.D.
- Functional Type IV secretion system: YES (FDR = 7.2 %)
Estimated copy number = 0 (0/0 KEGG proteins)
- Functional Type VI secretion system: N.D.
Individual results for each secretion system
Parameters:
==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================
Estimated copy number = 0 (0/0 KEGG proteins)
Release announcements
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Contact
- +43 1 4277 76681
- +43 1 4277 876681
- contact.cube@univie.ac.at
