Genomes encoding eukaryotic-like proteins
PF04997 RNA polymerase Rpb1, domain 1
Copy number in non-pathogens:
Mean=0.98 Stddev=0.16
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
Genome | Class* | ELD score | Number of proteins containing this domain |
---|---|---|---|
Campylobacter jejuni | s | 6 | 2 |
Ruminococcus sp. JC304 | s | 6 | 2 |
Staphylococcus aureus subsp. aureus | s | 12 | 3 |
Escherichia coli | s | 6 | 2 |
Bifidobacterium longum | s | 6 | 2 |
Shigella sonnei | s | 6 | 2 |
Neisseria cinerea ATCC 14685 | s | 6 | 2 |
Pseudoflavonifractor capillosus ATCC 29799 | s | 6 | 2 |
Salmonella enterica subsp. enterica serovar Heidelberg str. 41573 | s | 6 | 2 |
Fusobacterium sp. oral taxon 370 str. F0437 | s | 6 | 2 |
Salmonella enterica subsp. enterica serovar Hadar | s | 6 | 2 |
Mycobacterium tuberculosis TKK_04_0095 | s | 6 | 2 |
Fibrobacter succinogenes subsp. succinogenes S85 | s | 6 | 2 |
Fibrobacter succinogenes subsp. succinogenes S85 | s | 6 | 2 |
Acinetobacter baumannii 44327_7 | s | 6 | 2 |
Vibrio fortis | s | 6 | 2 |
Butyrivibrio sp. AE2032 | s | 6 | 2 |
Tissierellia bacterium S5-A11 | s | 6 | 2 |
Bacillus cereus | s | 6 | 2 |
Escherichia coli | s | 6 | 2 |
Acinetobacter baumannii | s | 6 | 2 |
Salmonella enterica subsp. enterica | s | 6 | 2 |
[Haemophilus] parasuis | p | 6 | 2 |
Bacillus cereus | s | 6 | 2 |
*p=pathogen;s=symbiont