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Genomes encoding eukaryotic-like proteins

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PF05167 Uncharacterised ACR (DUF711)

Copy number in non-pathogens:
Mean=0.13 Stddev=0.34

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Eikenella corrodens ATCC 23834 s 5 2
Kingella oralis ATCC 51147 s 5 2
Eikenella corrodens CC92I s 5 2
Kingella denitrificans ATCC 33394 s 5 2
Neisseria bacilliformis ATCC BAA-1200 s 5 2
Haemophilus sputorum HK 2154 s 5 2
Haemophilus sputorum CCUG 13788 s 5 2
Neisseria sp. oral taxon 020 str. F0370 s 5 2
Moraxella caprae DSM 19149 s 5 2
Enterococcus faecium E1165 s 5 2
Enterococcus faecium E155 s 5 2
Alysiella crassa DSM 2578 s 5 2
Neisseria elongata subsp. glycolytica ATCC 29315 s 5 2
Butyrivibrio sp. AE2032 s 5 2
Tissierellia bacterium S5-A11 s 5 2
Chelonobacter oris s 5 2
Neisseria elongata subsp. glycolytica s 5 2
Neisseria bacilliformis s 5 2
Neisseria elongata subsp. glycolytica s 5 2
Neisseria elongata subsp. glycolytica s 5 2
Eikenella corrodens s 5 2
Neisseria bacilliformis s 5 2
Enterococcus faecium s 5 2
Eikenella corrodens s 5 2
Eikenella corrodens s 5 2
Eikenella corrodens s 5 2
Eikenella corrodens s 5 2
Eikenella corrodens s 5 2
Eikenella corrodens s 5 2
Neisseria elongata subsp. elongata s 5 2
Eikenella corrodens s 5 2

*p=pathogen;s=symbiont

Release announcements

News

  • EffectiveDB genome mode fixed

    24.11.20
  • EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31

    20.08.17
  • EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29

    24.06.16

Latest publications

  • EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
  • Prediction of microbial phenotypes based on comparative genomics.

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