Genomes encoding eukaryotic-like proteins
PF04560 RNA polymerase Rpb2, domain 7
Copy number in non-pathogens:
Mean=0.98 Stddev=0.17
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
Genome | Class* | ELD score | Number of proteins containing this domain |
---|---|---|---|
Nocardia anaemiae NBRC 100462 | s | 5 | 2 |
Nocardia crassostreae | s | 5 | 2 |
Nocardia araoensis NBRC 100135 | s | 5 | 2 |
Nocardia tenerifensis NBRC 101015 | s | 5 | 2 |
Nocardia transvalensis NBRC 15921 | s | 5 | 2 |
Nocardia farcinica IFM 10152 | s | 5 | 2 |
Staphylococcus aureus subsp. aureus | s | 5 | 2 |
Nocardia brasiliensis ATCC 700358 | p | 5 | 2 |
Actinomadura madurae LIID-AJ290 | s | 5 | 2 |
Frankia sp. CpI1-P | s | 5 | 2 |
Butyrivibrio sp. AE2032 | s | 5 | 2 |
Tissierellia bacterium S5-A11 | s | 5 | 2 |
Escherichia coli | s | 5 | 2 |
Bacillus cereus | s | 5 | 2 |
Listeria monocytogenes | s | 5 | 2 |
[Haemophilus] parasuis | p | 5 | 2 |
Bacillus cereus | s | 5 | 2 |
*p=pathogen;s=symbiont