Metamenu

Effective results for Chlamydia psittaci 6BC (eggnog40)

Summary

Number of putative secreted proteins: 619
- Predicted by EffectiveT3: 133 (high confidence), 150 (low confidence)
- Predicted by EffectiveCCBD: 22 within, 10 before, 20 behind expected region 25..70aa
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 150 eukaryotic-like domains, contained in 339 proteins (102 high, 237 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type III

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
331636.CPSIT_0734(PF04561) (PF10385) (PF04565) (PF00562) (PF04563) (PF04560)
331636.G5O_0726(PF04561) (PF10385) (PF04565) (PF00562) (PF04563) (PF04560)
331636.G5O_0316+PF03797 PF02415ER
331636.CPSIT_0596(PF08207) (PF09285) (PF01132)(mitochondrial); (plastid)
331636.CPSIT_0733(PF04998) (PF04983) (PF04997) (PF05000) (PF00623)
331636.G5O_0590(PF08207) (PF09285) (PF01132)(mitochondrial); (plastid)
331636.CPSIT_0311+PF03797 PF02415ER
331636.CPSIT_0312+PF03797 PF02415ER
331636.G5O_0725(PF04998) (PF04983) (PF04997) (PF05000) (PF00623)
331636.CPSIT_0306PF03797 PF02415ER
331636.CPSIT_0302PF03797 PF02415(ER); (mitochondrial)
331636.CPSIT_0789(>)PF08123ER
331636.CPSIT_0232PF03797 PF02415ER
331636.CPSIT_0231PF03797 PF02415ER
331636.G5O_0779(>)PF08123ER; mitochondrial
331636.G5O_0366+(PF13177)(mitochondrial)
331636.G5O_0312PF03797 PF02415ER
331636.G5O_0315PF03797 PF02415ER
331636.CPSIT_0667(+)PF03797 PF02415ER
331636.CPSIT_0666(+)PF03797 PF02415ER
331636.G5O_0302PF03797 PF02415ER; (ER)
331636.G5O_0307PF03797 PF02415(ER); (mitochondrial)
331636.G5O_0235PF03797 PF02415ER
331636.G5O_0236PF03797 PF02415ER
331636.G5O_0845PF03797 PF02415mitochondrial; (mitochondrial)
331636.CPSIT_0109(PF03947) (PF00181)(mitochondrial)
331636.G5O_0661(+)PF03797 PF02415ER
331636.G5O_0660(+)PF03797 PF02415ER
331636.CPSIT_0297PF03797 PF02415ER; (ER)
331636.G5O_0692+(PF02978)mitochondrial; (mitochondrial)
331636.G5O_0113(PF03947) (PF00181)(mitochondrial)
331636.CPSIT_0700+(PF02978)mitochondrial; (mitochondrial)
331636.CPSIT_0738(PF00298) (PF03946)mitochondrial; (mitochondrial)
331636.CPSIT_0856PF03797 PF02415mitochondrial; (mitochondrial)
331636.G5O_0831(PF01743) (PF12627)mitochondrial; (mitochondrial)
331636.CPSIT_0363+(PF13177)(mitochondrial)
331636.G5O_0730(PF00298) (PF03946)mitochondrial; (mitochondrial)
331636.CPSIT_0310PF03797 PF02415ER
331636.CPSIT_0890(PF13899)ER
331636.CPSIT_0163(>)ER
331636.CPSIT_0309(+)PF03797ER
331636.CPSIT_0307PF03797ER
331636.CPSIT_0305PF02415ER
331636.CPSIT_0301(+)PF03797ER
331636.CPSIT_0760PF02902(mitochondrial); plastid
331636.G5O_0750PF02902(mitochondrial); plastid
331636.G5O_0757+(mitochondrial)
331636.G5O_0971(PF14714)mitochondrial
331636.G5O_0970(PF01743) (PF12627)(mitochondrial)
331636.CPSIT_0920(PF08207) (PF09285) (PF01132)
331636.CPSIT_0766+(mitochondrial)
331636.CPSIT_0767+mitochondrial; (mitochondrial)
331636.G5O_0170(PF03484) (PF03147)(mitochondrial)
331636.G5O_0313PF03797ER
331636.G5O_0314(+)PF03797ER
331636.G5O_0880(PF13899)ER
331636.G5O_0166(>)ER
331636.CPSIT_0668(+)PF03797ER
331636.G5O_0303PF03797ER
331636.CPSIT_0127(>)(PF01000) (PF01193)
331636.CPSIT_0125PF00416(mitochondrial)
331636.CPSIT_0123PF00828(mitochondrial)
331636.CPSIT_0121PF00861mitochondrial; (mitochondrial)
331636.CPSIT_0699(PF00886)(mitochondrial)
331636.CPSIT_0670+ER
331636.G5O_0206+PF05677(plastid)
331636.G5O_0320(+)PF03797 PF02415ER
331636.CPSIT_1040(PF00118)(mitochondrial)
331636.CPSIT_0111(PF00237)mitochondrial
331636.CPSIT_0110(PF00203)(mitochondrial)
331636.CPSIT_0640(>)ER
331636.G5O_0601+ER
331636.G5O_0858(<)(PF01195)(plastid)
331636.G5O_0851(PF16187)ER
331636.CPSIT_0818(PF01632)(mitochondrial)
331636.CPSIT_0819(PF00707)(mitochondrial)
331636.CPSIT_0817(PF00453)mitochondrial
331636.G5O_0137+ER; mitochondrial
331636.CPSIT_0811(PF01171)(ER); ER
331636.CPSIT_0653(PF00133) (PF08264) (PF13603)
331636.G5O_0663+ER
331636.CPSIT_0869(<)(PF01195)(plastid)
331636.G5O_0912(PF08207) (PF09285) (PF01132)
331636.G5O_0129PF00416(mitochondrial)
331636.G5O_0125PF00861mitochondrial; (mitochondrial)
331636.G5O_0127PF00828(mitochondrial)
331636.CPSIT_0821(PF02873)mitochondrial
331636.G5O_0691(PF00886)(mitochondrial)
331636.CPSIT_0534+ER
331636.G5O_0877(PF13899)mitochondrial
331636.G5O_0878(+)+(mitochondrial)
331636.G5O_0115(PF00237)mitochondrial
331636.G5O_0114(PF00203)(mitochondrial)
331636.CPSIT_0013(PF00163)(mitochondrial); mitochondrial
331636.G5O_0646(PF00133) (PF08264) (PF13603)
331636.CPSIT_0635(PF06418)(mitochondrial)
331636.CPSIT_0840(<)ER
331636.G5O_0802(PF01171)(ER)
331636.G5O_0809(PF01632)(mitochondrial)
331636.G5O_0808(PF00453)mitochondrial
331636.G5O_0649+ER
331636.CPSIT_0862(PF16187)ER
331636.CPSIT_0607+ER
331636.G5O_0810(PF00707)(mitochondrial)
331636.G5O_0812(PF02873)mitochondrial
331636.CPSIT_0604+(mitochondrial); mitochondrial
331636.CPSIT_1030(PF13899)ER
331636.CPSIT_0344+ER
331636.CPSIT_0727(+)(PF00006) (PF02874) (PF16886)
331636.CPSIT_0298PF03797ER
331636.G5O_0131(>)(PF01000) (PF01193)
331636.G5O_0628(PF06418)(mitochondrial)
331636.G5O_0719(+)(PF00006) (PF02874) (PF16886)
331636.G5O_0681PF09825ER
331636.CPSIT_1022(>)ER
331636.CPSIT_1023(<)ER
331636.G5O_0019(PF00163)(mitochondrial); mitochondrial
331636.CPSIT_0979(PF14714)mitochondrial
331636.CPSIT_0978(PF01743) (PF12627)(mitochondrial)
331636.G5O_1015(<)ER
331636.G5O_1014+ER
331636.G5O_0633(>)ER
331636.CPSIT_0364(>)ER
331636.CPSIT_0341(PF03840)ER
331636.G5O_0356+(PF00814)(plastid)
331636.G5O_0351+ER
331636.CPSIT_0886(PF13899)mitochondrial
331636.CPSIT_0316+ER
331636.G5O_1032(PF00118)(mitochondrial)
331636.G5O_0529+ER
331636.G5O_0348+ER
331636.G5O_0346(PF03840)ER
331636.CPSIT_0169(PF02582)(ER)
331636.CPSIT_0167(+)(PF03484) (PF03147)
331636.CPSIT_0304(+)PF03797 PF02415
331636.CPSIT_0605(+)+(plastid)
331636.G5O_0406(+)(mitochondrial)
331636.G5O_0400+(PF01795)
331636.CPSIT_0324(PF01351)(plastid)
331636.CPSIT_0853+plastid
331636.CPSIT_0287+PF10275
331636.CPSIT_0338+(plastid)
331636.G5O_0183+(mitochondrial)
331636.CPSIT_0446(PF07382)(mitochondrial)
331636.CPSIT_0923(+)mitochondrial
331636.G5O_0173(PF02582)(ER)
331636.G5O_0428+plastid
331636.G5O_0558(PF01171)(mitochondrial)
331636.CPSIT_0547(PF00204) (PF00986)
331636.G5O_0958+(PF01704)
331636.G5O_0956(PF00006) (PF02874)
331636.G5O_0309(+)PF03797 PF02415
331636.G5O_0542(PF00204) (PF00986)
331636.CPSIT_0124(PF00344)(mitochondrial)
331636.CPSIT_0122PF03719 PF00333
331636.CPSIT_0693(PF08264)(mitochondrial)
331636.CPSIT_0473(+)(ER); (plastid)
331636.G5O_0022(+)ER
331636.G5O_0330(PF01351)(plastid)
331636.G5O_0441(PF07382)(mitochondrial)
331636.G5O_0844+(plastid)
331636.G5O_0842+plastid
331636.CPSIT_0118PF00673 PF00281
331636.CPSIT_0802+(plastid)
331636.CPSIT_0040(PF00006)(mitochondrial)
331636.G5O_0602+PF01823
331636.G5O_0855(PF03948) (PF01281)
331636.CPSIT_0816(+)(PF01409) (PF02912)
331636.CPSIT_0656+(>)
331636.G5O_0685(PF08264)(mitochondrial)
331636.G5O_0045(PF00006) (PF02874)
331636.CPSIT_0261(PF02130)(mitochondrial)
331636.G5O_0266(PF02130)(mitochondrial)
331636.G5O_0599(+)+(plastid)
331636.CPSIT_0866(PF03948) (PF01281)
331636.CPSIT_0725(PF01813)(mitochondrial)
331636.G5O_0915(+)mitochondrial
331636.G5O_0128(PF00344)(mitochondrial)
331636.G5O_0122PF00673 PF00281
331636.G5O_0126PF03719 PF00333
331636.G5O_0698(PF00133) (PF08264)
331636.G5O_1056+(plastid)
331636.CPSIT_0706(PF00133) (PF08264)
331636.CPSIT_0017(+)ER
331636.CPSIT_0839(PF01743) (PF12627)
331636.G5O_0741+(plastid)
331636.G5O_0807(+)(PF01409) (PF02912)
331636.CPSIT_0739+(mitochondrial)
331636.CPSIT_0730(+)ER
331636.CPSIT_0608+PF01823
331636.G5O_0070(+)(mitochondrial)
331636.G5O_0253+ER; not used
331636.CPSIT_0031(PF00204) (PF00986)
331636.CPSIT_0855+(plastid)
331636.CPSIT_0721(PF00133) (PF08264)
331636.CPSIT_0726(PF00006) (PF02874)
331636.CPSIT_0504(PF11987)(mitochondrial)
331636.G5O_0717(PF01813)(mitochondrial)
331636.G5O_0713(PF00133) (PF08264)
331636.G5O_0718(PF00006) (PF02874)
331636.CPSIT_0963(PF00006) (PF02874)
331636.CPSIT_0401+(PF01795)
331636.CPSIT_0181+(mitochondrial)
331636.CPSIT_0965+(PF01704)
331636.CPSIT_0749+(plastid)
331636.CPSIT_0564(PF01171)(mitochondrial)
331636.G5O_0731+(mitochondrial)
331636.CPSIT_0410(+)(mitochondrial)
331636.CPSIT_0314PF03797 PF02415
331636.CPSIT_0313(+)PF03797 PF02415
331636.G5O_0037(PF00204) (PF00986)
331636.G5O_0292+PF10275
331636.G5O_0722(+)ER
331636.G5O_0501(PF11987)(mitochondrial)
331636.G5O_0344+(plastid)
331636.G5O_0101(PF02367)
331636.CPSIT_0146(PF00006)
331636.CPSIT_0096(PF02367)
331636.CPSIT_0097(PF12843)
331636.CPSIT_0300(+)PF03797
331636.CPSIT_0786PF07720
331636.CPSIT_0787+
331636.CPSIT_0785+
331636.CPSIT_0788+
331636.CPSIT_0541+
331636.CPSIT_0548(PF00521)
331636.G5O_0199(PF02224)
331636.G5O_0195+
331636.G5O_0191(PF03462)
331636.G5O_0190(+)PF02201
331636.G5O_0573(PF00406)
331636.G5O_0571PF00380
331636.G5O_0570PF00572
331636.G5O_0576+
331636.G5O_0574+
331636.CPSIT_0431+
331636.G5O_0370+
331636.G5O_0373(PF14622)
331636.G5O_0375+
331636.G5O_0776PF07720
331636.CPSIT_0321+
331636.CPSIT_0280(PF03690)
331636.G5O_0799PF00312
331636.G5O_0978+
331636.CPSIT_0204PF05677
331636.CPSIT_0203+
331636.CPSIT_0844+
331636.CPSIT_0335+
331636.G5O_0181+
331636.CPSIT_0440(PF05491)
331636.CPSIT_0443(PF05932)
331636.G5O_0364+
331636.G5O_0368+
331636.G5O_0369+
331636.G5O_0412(PF12843)
331636.G5O_0413+
331636.G5O_0967(PF05697)
331636.G5O_0226(PF01016)
331636.G5O_0225(PF00829)
331636.CPSIT_0142PF03219
331636.CPSIT_0145(PF01121)
331636.G5O_0220PF00338
331636.G5O_0086(+)(plastid)
331636.G5O_0089+
331636.CPSIT_0218PF00338
331636.CPSIT_0212+
331636.CPSIT_0215(PF00164)
331636.CPSIT_0216PF00177
331636.G5O_0775+
331636.G5O_0777+
331636.G5O_0778+
331636.G5O_0177+
331636.G5O_0793+
331636.G5O_0427+
331636.G5O_0228(PF01018)
331636.G5O_0550(<)
331636.CPSIT_0545+
331636.G5O_0951+
331636.CPSIT_0048(PF00217)
331636.CPSIT_0139+
331636.CPSIT_0917(PF00118)
331636.CPSIT_0432+
331636.G5O_0762(PF01487)
331636.CPSIT_0681(+)(plastid)
331636.CPSIT_0686(PF00118)
331636.G5O_0786(PF00406)
331636.CPSIT_0461(+)(>)
331636.CPSIT_0469(+)(plastid)
331636.CPSIT_0468+
331636.G5O_0304(+)PF03797
331636.G5O_0305PF03797
331636.G5O_0435(PF05491)
331636.G5O_0438(PF05932)
331636.G5O_0545(PF13177)
331636.G5O_0891(PF02410)
331636.G5O_0895(+)(PF01715)
331636.G5O_0943(PF02403)
331636.CPSIT_0052(PF01765)
331636.CPSIT_0053+
331636.CPSIT_0054(PF00889)
331636.CPSIT_0055(PF00318)
331636.CPSIT_0126PF00411
331636.CPSIT_0120PF00347
331636.CPSIT_0128(PF01196)
331636.CPSIT_0904(+)(PF01715)
331636.CPSIT_0900(PF02410)
331636.CPSIT_0277+
331636.CPSIT_0271+
331636.CPSIT_0698(PF01746)
331636.CPSIT_0696(PF01351)
331636.CPSIT_0697(PF01245)
331636.CPSIT_0690PF09825
331636.G5O_0150(PF00006)
331636.CPSIT_0474PF03219
331636.CPSIT_0472(PF06421)
331636.CPSIT_0580+
331636.CPSIT_0586(PF00814)
331636.G5O_0146PF03219
331636.CPSIT_0804+
331636.G5O_0446+
331636.G5O_0143+
331636.G5O_0205+
331636.CPSIT_1043+
331636.CPSIT_1048PF02201
331636.CPSIT_0119PF00410
331636.CPSIT_0113PF00252
331636.CPSIT_0112PF00189
331636.CPSIT_0117(PF17136)
331636.CPSIT_0116PF00238
331636.CPSIT_0115PF00366
331636.CPSIT_0114(PF00831)
331636.CPSIT_0809(PF03726)
331636.CPSIT_0808PF00312
331636.G5O_0149(PF01121)
331636.CPSIT_0803+
331636.CPSIT_0648+
331636.CPSIT_0485(PF01668)
331636.CPSIT_0241(>)
331636.CPSIT_0247+
331636.G5O_0327+
331636.G5O_0454+
331636.G5O_0455(+)(>)
331636.G5O_0217(PF00164)
331636.G5O_0214+
331636.G5O_0218PF00177
331636.G5O_0600+
331636.G5O_0857(PF01250)
331636.CPSIT_0108PF00276
331636.CPSIT_0106PF00297
331636.CPSIT_0107(PF00573)
331636.G5O_0093(PF02938)
331636.CPSIT_0073(PF00162)
331636.CPSIT_0074+
331636.G5O_0130PF00411
331636.CPSIT_0496(PF05932)
331636.G5O_0689(PF01245)
331636.G5O_0688(PF01351)
331636.CPSIT_0611(PF00958)
331636.CPSIT_0594+
331636.G5O_0595+
331636.G5O_0468(PF06421)
331636.G5O_0465(+)(plastid)
331636.G5O_0464+
331636.CPSIT_0868(PF01250)
331636.G5O_0629(PF03652)
331636.CPSIT_0503(PF02033)
331636.CPSIT_1063(PF01649)
331636.CPSIT_0717+
331636.G5O_0120PF00238
331636.G5O_0121(PF17136)
331636.G5O_0123PF00410
331636.G5O_0124PF00347
331636.CPSIT_0822(PF06962)
331636.CPSIT_0829(PF08367)
331636.CPSIT_0398(+)(PF00308)
331636.CPSIT_0626(+)(mitochondrial)
331636.G5O_0690(PF01746)
331636.G5O_0694(PF03462)
331636.G5O_0057(PF01765)
331636.G5O_0053(PF00217)
331636.G5O_1055(PF01649)
331636.G5O_0058+
331636.G5O_0059(PF00889)
331636.CPSIT_0531+
331636.CPSIT_0532+
331636.CPSIT_0537+
331636.G5O_0677(PF00118)
331636.G5O_0673(+)(plastid)
331636.G5O_0588+
331636.G5O_0580(PF00814)
331636.G5O_0277+
331636.G5O_0470PF03219
331636.G5O_0132(PF01196)
331636.G5O_0909(PF00118)
331636.G5O_0871(PF08459)
331636.G5O_0117PF00252
331636.CPSIT_1019(<)
331636.G5O_0543(PF00521)
331636.G5O_0111(PF00573)
331636.CPSIT_1011+
331636.G5O_0540+
331636.G5O_0110PF00297
331636.CPSIT_0708(>)
331636.CPSIT_0702(PF03462)
331636.G5O_0116PF00189
331636.CPSIT_0012(PF12368)
331636.G5O_0112PF00276
331636.G5O_0119PF00366
331636.G5O_0118(PF00831)
331636.CPSIT_0382+
331636.CPSIT_0636(PF03652)
331636.G5O_0060(PF00318)
331636.G5O_1040PF02201
331636.G5O_0641+
331636.G5O_0245(>)
331636.G5O_0482(PF01668)
331636.CPSIT_0846+
331636.G5O_0742+
331636.G5O_0800(PF03726)
331636.CPSIT_1009PF07720
331636.CPSIT_0009+
331636.CPSIT_0737PF00687
331636.CPSIT_0736(PF00466)
331636.CPSIT_0735(PF16320)
331636.CPSIT_0732(>)
331636.G5O_0102(PF12843)
331636.CPSIT_0350+
331636.CPSIT_0353(PF00814)
331636.G5O_0078+
331636.G5O_0077(PF00162)
331636.CPSIT_0512(PF00308)
331636.G5O_0251+
331636.G5O_0497(PF06071)
331636.G5O_0493(PF05932)
331636.G5O_0498(PF01687)
331636.G5O_0499(PF01509)
331636.G5O_0813(PF06962)
331636.CPSIT_0606+
331636.CPSIT_0034(PF05932)
331636.CPSIT_0030(PF00521)
331636.CPSIT_0347(<)
331636.G5O_0397(+)(PF00308)
331636.CPSIT_0500(PF06071)
331636.CPSIT_0501(PF01687)
331636.CPSIT_0502(PF01509)
331636.CPSIT_0505(PF13184)
331636.CPSIT_0959+
331636.G5O_0536+
331636.G5O_0532(>)
331636.CPSIT_0557+
331636.CPSIT_0556(<)
331636.G5O_0820(PF08367)
331636.CPSIT_0252+
331636.CPSIT_0192+
331636.CPSIT_0196(PF02224)
331636.CPSIT_1020(PF12344)
331636.CPSIT_0373+
331636.CPSIT_0371(PF14622)
331636.G5O_0018(PF12368)
331636.CPSIT_0974(PF05697)
331636.G5O_0015+
331636.G5O_1011(PF12344)
331636.G5O_1010(<)
331636.CPSIT_0579(PF00406)
331636.CPSIT_0577PF00380
331636.CPSIT_0576PF00572
331636.G5O_0700(>)
331636.G5O_0526+
331636.G5O_0527+
331636.G5O_0836+
331636.G5O_0837+
331636.CPSIT_0986+
331636.CPSIT_0187(+)PF02201
331636.CPSIT_0183+
331636.CPSIT_0188(PF03462)
331636.G5O_1022(PF13899)
331636.CPSIT_0368+
331636.CPSIT_0361+
331636.CPSIT_0365+
331636.CPSIT_0366+
331636.CPSIT_0740(PF00584)
331636.G5O_1001PF07720
331636.G5O_1003+
331636.G5O_1004+
331636.G5O_0282+
331636.G5O_0285(PF03690)
331636.G5O_0732(PF00584)
331636.G5O_0737+
331636.CPSIT_0416(PF12843)
331636.CPSIT_0417+
331636.G5O_0605(PF00958)
331636.G5O_0354+
331636.CPSIT_0882(PF08459)
331636.CPSIT_0888+
331636.CPSIT_0179+
331636.CPSIT_0174+
331636.CPSIT_0089(PF02938)
331636.CPSIT_0085+
331636.G5O_0036(PF00521)
331636.CPSIT_0951(PF02403)
331636.CPSIT_0771(PF01487)
331636.G5O_0039(PF05932)
331636.CPSIT_0223(PF00829)
331636.CPSIT_0550(PF13177)
331636.CPSIT_0225(PF01018)
331636.CPSIT_0224(PF01016)
331636.G5O_0728(PF00466)
331636.G5O_0729PF00687
331636.G5O_0727(+)(PF16320)
331636.G5O_0724(>)
331636.G5O_0502(PF13184)
331636.G5O_0500(PF02033)
331636.CPSIT_0429+
331636.G5O_0509(PF00308)
331636.G5O_0341+
331636.CPSIT_1012+
331636.CPSIT_0897(+)
331636.CPSIT_0892(+)
331636.CPSIT_0165(+)
331636.CPSIT_0769(+)
331636.G5O_0372(+)
331636.G5O_0990(+)
331636.CPSIT_0259(+)
331636.CPSIT_0841(+)
331636.CPSIT_0843(+)
331636.G5O_0562(+)
331636.G5O_0564(+)
331636.G5O_0360(+)
331636.G5O_0981(+)not used
331636.G5O_0963(+)
331636.G5O_0222(+)
331636.CPSIT_0327(+)
331636.G5O_0176(+)
331636.CPSIT_0457+
331636.CPSIT_0542(+)
331636.G5O_0888(+)
331636.G5O_0882(+)
331636.G5O_0955(+)
331636.CPSIT_0043(+)
331636.CPSIT_0042(+)
331636.CPSIT_0268(+)
331636.G5O_0760(+)
331636.G5O_0160(+)
331636.G5O_0168(+)
331636.CPSIT_0463(+)
331636.G5O_0548(+)
331636.CPSIT_1054(+)
331636.CPSIT_0902(+)
331636.CPSIT_0279(+)
331636.CPSIT_0745(+)
331636.G5O_0020(+)
331636.G5O_0333(+)
331636.G5O_0934(+)
331636.G5O_0843(+)
331636.CPSIT_1044(+)
331636.CPSIT_0647(+)
331636.CPSIT_0642(+)
331636.CPSIT_0245(+)
331636.G5O_0452(+)
331636.G5O_0456(+)not used
331636.G5O_0457(+)
331636.G5O_0211(+)
331636.CPSIT_0037(+)
331636.G5O_0853(+)
331636.CPSIT_0490(+)
331636.G5O_0047(+)
331636.G5O_0042(+)
331636.CPSIT_0864(+)
331636.CPSIT_0020(+)
331636.CPSIT_0003(+)
331636.CPSIT_0820(+)
331636.G5O_0699(+)
331636.CPSIT_0535(+)
331636.CPSIT_0536(+)
331636.G5O_0584(+)
331636.G5O_0274(+)
331636.G5O_0474(+)
331636.G5O_0230(+)
331636.CPSIT_0707(+)
331636.CPSIT_0832(+)
331636.CPSIT_0380(+)
331636.G5O_1046(+)
331636.CPSIT_0525(+)
331636.G5O_0640(+)
331636.G5O_0249(+)
331636.CPSIT_0336(+)
331636.CPSIT_0942(+)
331636.CPSIT_0008(+)
331636.CPSIT_0357(+)
331636.CPSIT_0451(+)
331636.G5O_0811(+)
331636.CPSIT_0854(+)
331636.G5O_0824(+)
331636.G5O_0537(+)
331636.G5O_0531(+)
331636.G5O_0530(+)
331636.CPSIT_0226(+)
331636.CPSIT_0997(+)
331636.G5O_0048(+)
331636.CPSIT_0370(+)
331636.G5O_0382(+)
331636.G5O_1016(+)
331636.G5O_0635(+)
331636.CPSIT_0570(+)
331636.G5O_0703(+)
331636.CPSIT_0970(+)
331636.G5O_0264(+)
331636.G5O_0833(+)
331636.G5O_0835(+)
331636.CPSIT_0568(+)
331636.G5O_0284(+)
331636.CPSIT_0752(+)
331636.G5O_0010(+)
331636.CPSIT_0477(+)
331636.CPSIT_0173(+)
331636.G5O_1035(+)
331636.CPSIT_0220(+)
331636.G5O_0342(+)
331636.G5O_1036(+)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: YES (FDR = 12.5 %)
    Estimated copy number = 2.2 (22/10 KEGG proteins)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================