Effective results for Desulfobacterium autotrophicum HRM2 (eggnog40)
Summary
Number of putative secreted proteins: 424
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 73 eukaryotic-like domains, contained in 424 proteins (34 high, 390 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
| Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
|---|---|---|---|---|---|
| 177437.HRM2_47200 | (PF13380) (PF13549) (PF13607) | ER | |||
| 177437.HRM2_10470 | (PF00158) (PF02954) | (ER); mitochondrial | |||
| 177437.HRM2_16900 | (PF14691) (PF00037) | ER | |||
| 177437.HRM2_22750 | (PF00037) (PF12838) | (mitochondrial) | |||
| 177437.HRM2_35670 | (PF13187) (PF02754) | (ER) | |||
| 177437.HRM2_38170 | (PF00391) (PF01326) | (mitochondrial); mitochondrial | |||
| 177437.HRM2_32120 | (PF14691) (PF12838) | ER | |||
| 177437.HRM2_22930 | (PF13183) (PF12838) | ER | |||
| 177437.HRM2_22720 | (PF14691) (PF00037) (PF13187) | (mitochondrial) | |||
| 177437.HRM2_04440 | (PF13380) (PF13549) (PF13607) | (mitochondrial) | |||
| 177437.HRM2_01200 | (PF13183) (PF02754) | (mitochondrial) | |||
| 177437.HRM2_46050 | (PF00391) (PF01326) | mitochondrial | |||
| 177437.HRM2_03200 | (PF13534) (PF13183) | ER | |||
| 177437.HRM2_12820 | (PF13534) (PF02754) | ER | |||
| 177437.HRM2_09900 | (PF00158) (PF02954) (PF13426) | ||||
| 177437.HRM2_35300 | (PF13426) | ER | |||
| 177437.HRM2_07070 | (PF14691) (PF13534) (PF02754) | ||||
| 177437.HRM2_14180 | (PF00158) (PF02954) (PF13426) | ||||
| 177437.HRM2_32150 | (PF04055) | mitochondrial; (mitochondrial) | |||
| 177437.HRM2_39140 | (PF13426) | ER | |||
| 177437.HRM2_38780 | (PF00158) (PF02954) (PF13426) | ||||
| 177437.HRM2_45870 | (PF00037) | ER | |||
| 177437.HRM2_28690 | (PF13426) | ER | |||
| 177437.HRM2_09590 | (PF05362) (PF02190) | (ER) | |||
| 177437.HRM2_45690 | (PF04055) | mitochondrial; (mitochondrial) | |||
| 177437.HRM2_39020 | (PF12838) | (mitochondrial) | |||
| 177437.HRM2_47740 | (PF04055) | (mitochondrial) | |||
| 177437.HRM2_37550 | (PF01558) | (mitochondrial) | |||
| 177437.HRM2_13300 | (PF13380) (PF13549) (PF13607) | ||||
| 177437.HRM2_38230 | (PF00939) | (mitochondrial) | |||
| 177437.HRM2_07510 | (PF02028) | (mitochondrial) | |||
| 177437.HRM2_11090 | (PF02080) | (ER) | |||
| 177437.HRM2_05380 | (PF13380) (PF13549) (PF13607) | ||||
| 177437.HRM2_29430 | (PF02080) | mitochondrial; (mitochondrial) | |||
| 177437.HRM2_33500 | PF04432 (PF04422) (PF00037) | ||||
| 177437.HRM2_46160 | (PF13380) (PF13549) (PF13607) | ||||
| 177437.HRM2_25300 | PF04432 (PF04422) (PF12838) | ||||
| 177437.HRM2_16770 | (PF13380) (PF13549) (PF13607) | ||||
| 177437.HRM2_04090 | (PF13534) | mitochondrial; (mitochondrial) | |||
| 177437.HRM2_44060 | (PF07837) (PF02971) (PF04961) | ||||
| 177437.HRM2_22900 | (PF02080) | ER | |||
| 177437.HRM2_41740 | (PF00158) (PF02954) (PF13426) | ||||
| 177437.HRM2_07490 | (PF02028) | (ER) | |||
| 177437.HRM2_21210 | (PF02415) | (mitochondrial) | |||
| 177437.HRM2_02900 | (PF13380) (PF13549) (PF13607) | ||||
| 177437.HRM2_43470 | (PF02080) | ER | |||
| 177437.HRM2_41880 | (PF13426) | ER | |||
| 177437.HRM2_01620 | (PF01264) | mitochondrial | |||
| 177437.HRM2_10400 | (PF05023) | (mitochondrial) | |||
| 177437.HRM2_01240 | (PF02028) | ER | |||
| 177437.HRM2_08030 | (PF03016) | mitochondrial; (mitochondrial) | |||
| 177437.HRM2_00500 | (PF02028) | ER | |||
| 177437.HRM2_11240 | (PF01558) | (ER) | |||
| 177437.HRM2_22850 | (PF02080) | ER | |||
| 177437.HRM2_15180 | (PF01163) | (mitochondrial); mitochondrial | |||
| 177437.HRM2_44950 | (PF13380) (PF13549) (PF13607) | ||||
| 177437.HRM2_30860 | (PF02219) | (mitochondrial) | |||
| 177437.HRM2_47940 | (PF02080) | ER | |||
| 177437.HRM2_32530 | (PF13426) | ER | |||
| 177437.HRM2_17570 | (PF06241) | (mitochondrial) | |||
| 177437.HRM2_07790 | (PF00939) | ER | |||
| 177437.HRM2_15040 | (PF13426) | ER | |||
| 177437.HRM2_13910 | (PF02080) | ER | |||
| 177437.HRM2_24290 | (PF00862) | (ER) | |||
| 177437.HRM2_32700 | (PF00158) (PF02954) (PF13426) | ||||
| 177437.HRM2_06780 | (PF13380) (PF13549) (PF13607) | ||||
| 177437.HRM2_14000 | (PF02754) | ER; (ER) | |||
| 177437.HRM2_12080 | (PF13426) | ER | |||
| 177437.HRM2_07930 | (PF02028) | (ER) | |||
| 177437.HRM2_13710 | (PF13426) | ER | |||
| 177437.HRM2_05940 | (PF13426) | ER; (ER) | |||
| 177437.HRM2_22700 | (PF00158) (PF02954) (PF13426) | ||||
| 177437.HRM2_16090 | (PF00158) (PF02954) (PF13426) | ||||
| 177437.HRM2_37830 | (PF13380) (PF13549) (PF13607) | ||||
| 177437.HRM2_10840 | (PF04055) | (ER) | |||
| 177437.HRM2_43160 | (PF07837) (PF02971) (PF04961) | ||||
| 177437.HRM2_09150 | (PF06071) | (mitochondrial) | |||
| 177437.HRM2_42020 | (PF00158) (PF02954) (PF13426) | ||||
| 177437.HRM2_48860 | PF01807 | (mitochondrial) | |||
| 177437.HRM2_25830 | (PF13426) | (mitochondrial) | |||
| 177437.HRM2_07120 | (PF02080) | ER | |||
| 177437.HRM2_23030 | (PF13401) | (mitochondrial) | |||
| 177437.HRM2_06190 | (PF02915) | (mitochondrial) | |||
| 177437.HRM2_00280 | (PF13426) | (ER) | |||
| 177437.HRM2_45320 | (PF00158) (PF02954) | (mitochondrial) | |||
| 177437.HRM2_42990 | (PF00391) (PF01326) | ||||
| 177437.HRM2_24030 | (PF13431) | (mitochondrial) | |||
| 177437.HRM2_47780 | (PF14691) (PF12838) | ||||
| 177437.HRM2_07100 | (PF00158) (PF02954) | ||||
| 177437.HRM2_22520 | (PF01264) | plastid | |||
| 177437.HRM2_21470 | (PF01855) (PF13187) | ||||
| 177437.HRM2_46880 | (PF00158) (PF02954) | ||||
| 177437.HRM2_40790 | (PF01855) (PF00037) | ||||
| 177437.HRM2_21220 | PF02550 PF13336 | ||||
| 177437.HRM2_01570 | (PF00158) (PF02954) | ||||
| 177437.HRM2_25090 | (PF00158) (PF02954) | ||||
| 177437.HRM2_43590 | PF02550 PF13336 | ||||
| 177437.HRM2_34500 | (PF00158) (PF02954) | ||||
| 177437.HRM2_40010 | (PF00158) (PF02954) | ||||
| 177437.HRM2_42770 | (PF14691) (PF12838) | ||||
| 177437.HRM2_28270 | (PF13183) (PF02754) | ||||
| 177437.HRM2_13650 | PF04432 (PF04422) | ||||
| 177437.HRM2_30750 | (PF13534) (PF00037) | ||||
| 177437.HRM2_20400 | (PF13183) (PF02754) | ||||
| 177437.HRM2_37330 | (PF00158) (PF02954) | ||||
| 177437.HRM2_14330 | (PF13187) | (ER) | |||
| 177437.HRM2_15970 | PF02550 PF13336 | ||||
| 177437.HRM2_03190 | (PF02754) | (mitochondrial) | |||
| 177437.HRM2_07500 | (PF00158) (PF02954) | ||||
| 177437.HRM2_23300 | (PF01406) (PF09190) | ||||
| 177437.HRM2_23050 | (PF00391) (PF01326) | ||||
| 177437.HRM2_04400 | (PF05362) (PF02190) | ||||
| 177437.HRM2_46990 | (PF13183) (PF02754) | ||||
| 177437.HRM2_14320 | (PF13187) (PF14697) | ||||
| 177437.HRM2_33510 | (PF01855) (PF00037) | ||||
| 177437.HRM2_00570 | (PF01980) | (plastid) | |||
| 177437.HRM2_26740 | (PF01406) (PF09190) | ||||
| 177437.HRM2_27760 | (PF00158) (PF02954) | ||||
| 177437.HRM2_49430 | (PF01558) (PF01855) | ||||
| 177437.HRM2_37350 | (PF00158) (PF02954) | ||||
| 177437.HRM2_28330 | (PF13183) (PF02754) | ||||
| 177437.HRM2_27980 | (PF04055) | (plastid) | |||
| 177437.HRM2_22580 | (PF05362) (PF02190) | ||||
| 177437.HRM2_07180 | (PF00391) (PF01326) | ||||
| 177437.HRM2_22290 | (PF00158) (PF02954) | ||||
| 177437.HRM2_30080 | (PF00158) (PF02954) | ||||
| 177437.HRM2_49400 | (PF05362) (PF02190) | ||||
| 177437.HRM2_15430 | (PF00158) (PF02954) | ||||
| 177437.HRM2_21900 | (PF13380) (PF13607) | ||||
| 177437.HRM2_41090 | (PF01558) (PF01855) | ||||
| 177437.HRM2_05020 | PF02550 PF13336 | ||||
| 177437.HRM2_10970 | (PF00158) (PF02954) | ||||
| 177437.HRM2_14670 | (PF00158) (PF02954) | ||||
| 177437.HRM2_30400 | (PF05362) (PF02190) | ||||
| 177437.HRM2_02850 | (PF00158) (PF02954) | ||||
| 177437.HRM2_13260 | (PF00158) (PF02954) | ||||
| 177437.HRM2_18950 | (PF00037) (PF12838) | ||||
| 177437.HRM2_03790 | (PF00158) (PF02954) | ||||
| 177437.HRM2_31650 | (PF13183) (PF02754) | ||||
| 177437.HRM2_23890 | PF02550 PF13336 | ||||
| 177437.HRM2_04840 | (PF04055) | (ER) | |||
| 177437.HRM2_21630 | PF02550 PF13336 | ||||
| 177437.HRM2_03650 | (PF00158) (PF02954) | ||||
| 177437.HRM2_25800 | (PF13534) (PF02754) | ||||
| 177437.HRM2_08480 | (PF13183) (PF02754) | ||||
| 177437.HRM2_22950 | (PF00391) (PF01326) | ||||
| 177437.HRM2_27380 | (PF00158) (PF02954) | ||||
| 177437.HRM2_20550 | (PF00158) (PF02954) | ||||
| 177437.HRM2_46850 | (PF00158) (PF02954) | ||||
| 177437.HRM2_00810 | (PF13183) (PF02754) | ||||
| 177437.HRM2_07450 | PF02550 PF13336 | ||||
| 177437.HRM2_45820 | (PF00158) (PF02954) | ||||
| 177437.HRM2_05760 | (PF00158) (PF02954) | ||||
| 177437.HRM2_20830 | (PF00158) (PF02954) | ||||
| 177437.HRM2_28000 | (PF04055) | (ER) | |||
| 177437.HRM2_19580 | (PF00158) (PF02954) | ||||
| 177437.HRM2_12410 | (PF00391) (PF01326) | ||||
| 177437.HRM2_16260 | (PF00391) (PF01326) | ||||
| 177437.HRM2_16060 | PF02550 PF13336 | ||||
| 177437.HRM2_08840 | PF02550 PF13336 | ||||
| 177437.HRM2_11810 | (PF00158) (PF02954) | ||||
| 177437.HRM2_20130 | (PF01406) (PF09190) | ||||
| 177437.HRM2_15860 | (PF00158) (PF02954) | ||||
| 177437.HRM2_47650 | (PF00158) (PF02954) | ||||
| 177437.HRM2_41830 | (PF00158) (PF02954) | ||||
| 177437.HRM2_40240 | (PF00158) (PF02954) | ||||
| 177437.HRM2_35510 | (PF13183) (PF02754) | ||||
| 177437.HRM2_42780 | (PF01558) (PF01855) | ||||
| 177437.HRM2_11230 | (PF01855) (PF00037) | ||||
| 177437.HRM2_15240 | (PF04055) | (ER) | |||
| 177437.HRM2_41790 | (PF13534) | ||||
| 177437.HRM2_37840 | (PF00158) | ||||
| 177437.HRM2_16440 | (PF03692) | ||||
| 177437.HRM2_04900 | (PF00037) | ||||
| 177437.HRM2_31030 | (PF04055) | ||||
| 177437.HRM2_22740 | PF04432 | ||||
| 177437.HRM2_38570 | (PF01855) | ||||
| 177437.HRM2_43550 | (PF13426) | ||||
| 177437.HRM2_41970 | (PF05088) | ||||
| 177437.HRM2_23830 | PF02550 | ||||
| 177437.HRM2_48200 | (PF04055) | ||||
| 177437.HRM2_37470 | (PF04055) | ||||
| 177437.HRM2_40780 | (PF01558) | ||||
| 177437.HRM2_40760 | (PF02915) | ||||
| 177437.HRM2_15160 | (PF12838) | ||||
| 177437.HRM2_14360 | (PF00037) | ||||
| 177437.HRM2_33150 | (PF04055) | ||||
| 177437.HRM2_21650 | (PF00343) | ||||
| 177437.HRM2_47420 | (PF02080) | ||||
| 177437.HRM2_16580 | (PF12038) | ||||
| 177437.HRM2_30790 | (PF02219) | ||||
| 177437.HRM2_25370 | (PF04055) | ||||
| 177437.HRM2_38560 | (PF01558) | ||||
| 177437.HRM2_07390 | PF01807 | ||||
| 177437.HRM2_02010 | (PF12838) | ||||
| 177437.HRM2_30760 | (PF09861) | ||||
| 177437.HRM2_30770 | (PF00037) | ||||
| 177437.HRM2_43540 | (PF00343) | ||||
| 177437.HRM2_42430 | (PF03692) | ||||
| 177437.HRM2_16330 | (PF02080) | ||||
| 177437.HRM2_07530 | (PF13426) | ||||
| 177437.HRM2_34680 | (PF00158) | ||||
| 177437.HRM2_10270 | PF03522 | ||||
| 177437.HRM2_06720 | (PF04055) | ||||
| 177437.HRM2_33520 | (PF01558) | ||||
| 177437.HRM2_21790 | (PF05167) | ||||
| 177437.HRM2_13510 | (PF06071) | ||||
| 177437.HRM2_01150 | (PF12838) | ||||
| 177437.HRM2_24160 | (PF00343) | ||||
| 177437.HRM2_46340 | PF01807 | ||||
| 177437.HRM2_39970 | PF01807 | ||||
| 177437.HRM2_00790 | (PF00158) | ||||
| 177437.HRM2_39570 | (PF12838) | ||||
| 177437.HRM2_10640 | (PF02915) | ||||
| 177437.HRM2_19240 | PF01807 | ||||
| 177437.HRM2_08760 | (PF13426) | ||||
| 177437.HRM2_41990 | (PF02915) | ||||
| 177437.HRM2_14950 | (PF04055) | ||||
| 177437.HRM2_23320 | (PF12344) | ||||
| 177437.HRM2_09740 | (PF04055) | ||||
| 177437.HRM2_45510 | (PF13380) | ||||
| 177437.HRM2_49190 | (PF12806) | ||||
| 177437.HRM2_47350 | (PF01980) | ||||
| 177437.HRM2_02140 | (PF03063) | ||||
| 177437.HRM2_00090 | (PF04055) | ||||
| 177437.HRM2_24950 | (PF04055) | ||||
| 177437.HRM2_00950 | (PF14697) | ||||
| 177437.HRM2_06640 | (PF03692) | ||||
| 177437.HRM2_42450 | (PF00037) | ||||
| 177437.HRM2_07730 | (PF12806) | ||||
| 177437.HRM2_44670 | (PF13401) | ||||
| 177437.HRM2_45850 | (PF04055) | ||||
| 177437.HRM2_07600 | (PF03692) | ||||
| 177437.HRM2_09130 | (PF02028) | ||||
| 177437.HRM2_45980 | (PF02028) | ||||
| 177437.HRM2_34220 | (PF00158) | ||||
| 177437.HRM2_23440 | (PF05362) | ||||
| 177437.HRM2_41750 | (PF12838) | ||||
| 177437.HRM2_14090 | (PF02754) | ||||
| 177437.HRM2_16550 | (PF00037) | ||||
| 177437.HRM2_33610 | (PF13401) | ||||
| 177437.HRM2_47900 | (PF13426) | ||||
| 177437.HRM2_26810 | (PF01406) | ||||
| 177437.HRM2_02150 | (PF02689) | ||||
| 177437.HRM2_36800 | (PF13401) | ||||
| 177437.HRM2_03600 | (PF13426) | ||||
| 177437.HRM2_03510 | (PF05088) | ||||
| 177437.HRM2_06100 | (PF02219) | ||||
| 177437.HRM2_42440 | (PF00037) | ||||
| 177437.HRM2_26150 | PF01807 | ||||
| 177437.HRM2_34180 | (PF14697) | ||||
| 177437.HRM2_40290 | (PF00939) | ||||
| 177437.HRM2_44440 | (PF13271) | ||||
| 177437.HRM2_00740 | (PF02219) | ||||
| 177437.HRM2_48110 | (PF04055) | ||||
| 177437.HRM2_10680 | (PF12838) | ||||
| 177437.HRM2_33330 | (PF04055) | ||||
| 177437.HRM2_45080 | (PF12838) | ||||
| 177437.HRM2_48590 | (PF13911) | ||||
| 177437.HRM2_13250 | (PF04055) | ||||
| 177437.HRM2_16160 | (PF09861) | ||||
| 177437.HRM2_01830 | (PF00391) | ||||
| 177437.HRM2_02830 | (PF13426) | ||||
| 177437.HRM2_40920 | (PF04055) | ||||
| 177437.HRM2_12070 | (PF00158) | ||||
| 177437.HRM2_38410 | (PF05088) | ||||
| 177437.HRM2_25930 | (PF01980) | ||||
| 177437.HRM2_03500 | (PF01326) | ||||
| 177437.HRM2_30640 | PF08213 | not used | |||
| 177437.HRM2_44720 | (PF13910) | ||||
| 177437.HRM2_06800 | (PF13401) | ||||
| 177437.HRM2_34080 | (PF13271) | ||||
| 177437.HRM2_49340 | (PF04055) | ||||
| 177437.HRM2_10690 | (PF01855) | ||||
| 177437.HRM2_26580 | (PF13187) | ||||
| 177437.HRM2_40600 | (PF03063) | ||||
| 177437.HRM2_21910 | (PF13549) | ||||
| 177437.HRM2_05050 | (PF00809) | ||||
| 177437.HRM2_41060 | (PF02943) | ||||
| 177437.HRM2_10560 | PF03522 | ||||
| 177437.HRM2_24520 | PF03226 | ||||
| 177437.HRM2_38880 | (PF13426) | ||||
| 177437.HRM2_06230 | (PF04055) | ||||
| 177437.HRM2_39420 | (PF13426) | ||||
| 177437.HRM2_19280 | (PF13401) | ||||
| 177437.HRM2_03060 | (PF12806) | ||||
| 177437.HRM2_23850 | PF01807 | ||||
| 177437.HRM2_18150 | (PF04055) | ||||
| 177437.HRM2_43730 | (PF05167) | ||||
| 177437.HRM2_48130 | (PF04055) | ||||
| 177437.HRM2_26590 | (PF14691) | ||||
| 177437.HRM2_14270 | (PF04055) | ||||
| 177437.HRM2_19960 | (PF13431) | ||||
| 177437.HRM2_31130 | (PF12806) | ||||
| 177437.HRM2_16740 | (PF01592) | ||||
| 177437.HRM2_29100 | (PF02915) | ||||
| 177437.HRM2_03270 | (PF01326) | ||||
| 177437.HRM2_04260 | (PF04055) | ||||
| 177437.HRM2_38270 | (PF00939) | ||||
| 177437.HRM2_42700 | (PF03692) | ||||
| 177437.HRM2_03300 | (PF16561) | ||||
| 177437.HRM2_14870 | (PF14697) | ||||
| 177437.HRM2_31920 | (PF00158) | ||||
| 177437.HRM2_37570 | (PF01855) | ||||
| 177437.HRM2_07420 | (PF03692) | ||||
| 177437.HRM2_26720 | (PF13187) | ||||
| 177437.HRM2_45940 | (PF04055) | ||||
| 177437.HRM2_23150 | (PF02915) | ||||
| 177437.HRM2_08800 | (PF14691) | ||||
| 177437.HRM2_23710 | (PF02915) | ||||
| 177437.HRM2_44960 | (PF00391) | ||||
| 177437.HRM2_21480 | (PF01558) | ||||
| 177437.HRM2_07880 | (PF00158) | ||||
| 177437.HRM2_46010 | (PF00158) | ||||
| 177437.HRM2_21710 | (PF04055) | ||||
| 177437.HRM2_13460 | (PF03266) | ||||
| 177437.HRM2_04520 | (PF13187) | ||||
| 177437.HRM2_21390 | (PF14697) | ||||
| 177437.HRM2_13280 | (PF16983) | ||||
| 177437.HRM2_29560 | PF02807 | ||||
| 177437.HRM2_01260 | (PF00158) | ||||
| 177437.HRM2_38710 | (PF05088) | ||||
| 177437.HRM2_16730 | (PF02219) | ||||
| 177437.HRM2_42390 | (PF12838) | ||||
| 177437.HRM2_16640 | (PF00809) | ||||
| 177437.HRM2_08010 | PF01807 | ||||
| 177437.HRM2_38910 | (PF00037) | ||||
| 177437.HRM2_17460 | (PF13426) | ||||
| 177437.HRM2_08470 | (PF09861) | ||||
| 177437.HRM2_00520 | (PF00809) | ||||
| 177437.HRM2_29950 | (PF04055) | ||||
| 177437.HRM2_04530 | (PF03692) | ||||
| 177437.HRM2_39890 | (PF12838) | ||||
| 177437.HRM2_33000 | (PF04055) | ||||
| 177437.HRM2_21380 | (PF14697) | ||||
| 177437.HRM2_29390 | PF01807 | ||||
| 177437.HRM2_15640 | (PF04055) | ||||
| 177437.HRM2_47530 | (PF12646) | ||||
| 177437.HRM2_46820 | (PF02915) | ||||
| 177437.HRM2_42010 | (PF02915) | ||||
| 177437.HRM2_47190 | (PF04055) | ||||
| 177437.HRM2_32350 | (PF09861) | ||||
| 177437.HRM2_48890 | (PF13401) | ||||
| 177437.HRM2_16720 | (PF04961) | ||||
| 177437.HRM2_43830 | (PF00037) | ||||
| 177437.HRM2_00820 | (PF03063) | ||||
| 177437.HRM2_09510 | PF01807 | ||||
| 177437.HRM2_34350 | PF01807 | ||||
| 177437.HRM2_15440 | (PF13426) | ||||
| 177437.HRM2_08860 | (PF12806) | ||||
| 177437.HRM2_23770 | (PF13183) | ||||
| 177437.HRM2_08910 | (PF05362) | ||||
| 177437.HRM2_23600 | (PF00343) | ||||
| 177437.HRM2_40510 | (PF01163) | ||||
| 177437.HRM2_41020 | (PF02915) | ||||
| 177437.HRM2_04490 | (PF13187) | ||||
| 177437.HRM2_02180 | (PF16561) | ||||
| 177437.HRM2_11160 | (PF00158) | ||||
| 177437.HRM2_08670 | (PF00391) | ||||
| 177437.HRM2_15650 | (PF04055) | ||||
| 177437.HRM2_43510 | (PF01264) | ||||
| 177437.HRM2_08580 | (PF13426) | ||||
| 177437.HRM2_10710 | (PF01558) | ||||
| 177437.HRM2_11170 | (PF13426) | ||||
| 177437.HRM2_09180 | PF13336 | ||||
| 177437.HRM2_05160 | (PF04055) | ||||
| 177437.HRM2_14380 | (PF13183) | ||||
| 177437.HRM2_44990 | (PF13534) | ||||
| 177437.HRM2_37580 | (PF13187) | ||||
| 177437.HRM2_14010 | (PF13183) | ||||
| 177437.HRM2_06890 | (PF02915) | ||||
| 177437.HRM2_35970 | (PF04055) | ||||
| 177437.HRM2_21610 | (PF01592) | ||||
| 177437.HRM2_04480 | (PF13534) | ||||
| 177437.HRM2_46840 | (PF07998) | ||||
| 177437.HRM2_32370 | (PF14691) | ||||
| 177437.HRM2_19030 | (PF00391) | ||||
| 177437.HRM2_39450 | (PF13426) | ||||
| 177437.HRM2_16670 | (PF03063) | ||||
| 177437.HRM2_22080 | (PF13534) | ||||
| 177437.HRM2_32990 | (PF04055) | ||||
| 177437.HRM2_43390 | (PF00037) | ||||
| 177437.HRM2_07460 | (PF00809) | ||||
| 177437.HRM2_20710 | PF01807 | ||||
| 177437.HRM2_30900 | (PF02219) | ||||
| 177437.HRM2_45120 | (PF12838) | ||||
| 177437.HRM2_27290 | (PF10294) | ||||
| 177437.HRM2_05360 | (PF00158) | ||||
| 177437.HRM2_33760 | (PF00037) | ||||
| 177437.HRM2_01220 | (PF02028) | ||||
| 177437.HRM2_17580 | (PF01592) | ||||
| 177437.HRM2_03590 | (PF10294) | ||||
| 177437.HRM2_32410 | (PF13183) | ||||
| 177437.HRM2_01530 | (PF04055) | ||||
| 177437.HRM2_16600 | (PF00037) | ||||
| 177437.HRM2_22760 | (PF13534) | ||||
| 177437.HRM2_42200 | (PF00158) | ||||
| 177437.HRM2_11550 | (PF04055) | ||||
| 177437.HRM2_12770 | (PF04055) | ||||
| 177437.HRM2_16070 | (PF12806) | ||||
| 177437.HRM2_44310 | PF01807 | ||||
| 177437.HRM2_03800 | (PF04055) | ||||
| 177437.HRM2_26260 | (PF12344) | ||||
| 177437.HRM2_15250 | (PF12806) | ||||
| 177437.HRM2_36670 | (PF02080) | ||||
| 177437.HRM2_34920 | (PF04055) | ||||
| 177437.HRM2_17250 | (PF13426) | ||||
| 177437.HRM2_41120 | (PF01592) | ||||
| 177437.HRM2_14340 | (PF13187) | ||||
| 177437.HRM2_41010 | (PF03063) | ||||
| 177437.HRM2_46040 | (PF00809) | ||||
| 177437.HRM2_43440 | (PF03063) | ||||
| 177437.HRM2_01230 | (PF00809) | ||||
| 177437.HRM2_39300 | (PF04055) | ||||
| 177437.HRM2_32220 | (PF13426) | ||||
| 177437.HRM2_26860 | (PF01980) | ||||
| 177437.HRM2_16610 | (PF03692) | ||||
| 177437.HRM2_22770 | (PF02754) | ||||
| 177437.HRM2_38300 | (PF00939) | ||||
| 177437.HRM2_06510 | PF01807 | ||||
| 177437.HRM2_42940 | (PF13401) | ||||
| 177437.HRM2_11120 | (PF03692) | ||||
| 177437.HRM2_23820 | (PF00037) | ||||
| 177437.HRM2_04110 | (PF04055) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)
Genome based results
Summary
- Gram negative: YES (FDR = 0.5 %)
- Functional Type III secretion system: NO (FDR = 12.5 %)
- Functional Type IV secretion system: NO (FDR = 7.2 %)
- Functional Type VI secretion system: NO (FDR = 7.7 %)
Individual results for each secretion system
- List of 100 most important COGs/NOGs for prediction of functional Type III secretion system (T3_top100_COGS.xls)
- List of 100 most important COGs/NOGs for prediction of functional Type IV secretion system (T4_top100_COGS.xls)
- List of 100 most important COGs/NOGs for prediction of functional Type VI secretion system (T6_top100_COGS.xls)
- List of COGs assigned to Type III secretion system in KEGG (T3SS_KEGG_cmp.xls)
- List of COGs assigned to Type IV secretion system in KEGG (T4SS_KEGG_cmp.xls)
- List of COGs assigned to Type VI secretion system in KEGG (T6SS_KEGG_cmp.xls)
Parameters:
==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================
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