Metamenu

Genomes encoding eukaryotic-like proteins

PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term

Copy number in non-pathogens:
Mean=0.10 Stddev=0.34

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Ruminococcus faecis JCM 15917 s 8 3
Bacteroides xylanisolvens SD CC 1b s 11 4
Bacteroides xylanisolvens SD CC 2a s 11 4
Campylobacter fetus subsp. fetus s 5 2
Bacteroides fragilis s 5 2
Parabacteroides distasonis s 8 3
Clostridium disporicum s 5 2
Anaerostipes hadrus s 5 2
Parabacteroides distasonis s 5 2
Bacteroides thetaiotaomicron s 5 2
Roseburia inulinivorans s 5 2
Bacteroides vulgatus s 8 3
Bacteroides thetaiotaomicron s 8 3
Anaerostipes hadrus s 5 2
Blautia obeum s 14 5
[Ruminococcus] torques s 5 2
Bacteroides vulgatus s 5 2
Bacteroides thetaiotaomicron s 8 3
Parabacteroides distasonis s 11 4
Bacteroides ovatus s 5 2
Bacteroides vulgatus s 11 4
Bacteroides thetaiotaomicron s 8 3
Parabacteroides distasonis s 5 2
Faecalibacterium prausnitzii s 5 2
Bacteroides dorei DSM 17855 s 11 4
Bacteroides xylanisolvens SD CC 1b s 11 4
Bacteroides vulgatus PC510 s 5 2
Bacteroides xylanisolvens SD CC 2a s 11 4
Bacteroides cellulosilyticus DSM 14838 s 5 2
Parabacteroides johnsonii DSM 18315 s 5 2
Bacteroides sp. 3_1_13 s 8 3
Parabacteroides sp. D26 s 5 2
Paraprevotella clara YIT 11840 s 8 3
Paraprevotella xylaniphila YIT 11841 s 8 3
Bacteroides ovatus ATCC 8483 s 11 4
[Clostridium] symbiosum ATCC 14940 s 5 2
Coprococcus eutactus ATCC 27759 s 8 3
Eubacterium ventriosum ATCC 27560 s 5 2
Lachnospiraceae bacterium M18-1 s 5 2
Oscillibacter sp. 1-3 s 5 2
Eubacterium plexicaudatum ASF492 s 5 2
Clostridium sp. ASF502 s 5 2
Parabacteroides sp. ASF519 s 5 2
Rivularia sp. PCC 7116 s 5 2
Clostridium sp. L2-50 s 5 2
Bacteroides fragilis str. S13 L11 s 5 2
Bacteroides fragilis str. 3996 N(B) 6 s 5 2
Bacteroides fragilis str. 3998 T(B) 4 s 5 2
Blautia hydrogenotrophica DSM 10507 s 5 2
Blautia sp. KLE 1732 s 8 3
Clostridium sp. KLE 1755 s 8 3
Bacteroides cellulosilyticus WH2 s 5 2
Brachyspira innocens ATCC 29796 s 5 2
Selenomonas ruminantium subsp. ruminantium ATCC 12561 s 5 2
Megamonas hypermegale DSM 1672 s 5 2
Clostridiales bacterium NK3B98 s 8 3
Bacteroides fragilis 3_1_12 s 5 2
Bacteroides sp. 1_1_6 s 5 2
Parabacteroides sp. 2_1_7 s 8 3
Bacteroides sp. 4_3_47FAA s 5 2
Bacteroides sp. 9_1_42FAA s 5 2
Bacteroides sp. D1 s 5 2
Bacteroides sp. D2 s 5 2
Bacteroides dorei 5_1_36/D4 s 8 3
Ruminococcus sp. 5_1_39BFAA s 5 2
Bacteroides sp. 2_1_22 s 8 3
Bacteroides sp. 2_1_33B s 5 2
Bacteroides sp. 3_1_33FAA s 11 4
Bacteroides sp. 3_1_40A s 8 3
Lachnospiraceae bacterium 1_4_56FAA s 5 2
Bacteroides ovatus 3_8_47FAA s 5 2
Bacteroides sp. 3_1_19 s 5 2
Bacteroides sp. D22 s 11 4
Alistipes indistinctus YIT 12060 s 5 2
[Clostridium] symbiosum WAL-14163 s 8 3
Odoribacter laneus YIT 12061 s 8 3
Bacteroides cellulosilyticus CL02T12C19 s 8 3
Bacteroides dorei CL02T00C15 s 8 3
Bacteroides dorei CL02T12C06 s 8 3
Bacteroides nordii CL02T12C05 s 5 2
Bacteroides ovatus CL02T12C04 s 14 5
Bacteroides ovatus CL03T12C18 s 5 2
Bacteroides uniformis CL03T00C23 s 5 2
Bacteroides uniformis CL03T12C37 s 5 2
Bacteroides vulgatus CL09T03C04 s 8 3
Parabacteroides distasonis CL03T12C09 s 5 2
Parabacteroides goldsteinii CL02T12C30 s 8 3
Bacteroides faecis MAJ27 s 8 3
Butyrivibrio sp. FCS014 s 8 3
Parabacteroides sp. D25 s 8 3
Bacteroides sp. HPS0048 s 5 2
Dinoroseobacter shibae DFL 12 = DSM 16493 s 5 2
Butyrivibrio proteoclasticus B316 s 5 2
Pseudomonas stutzeri s 5 2
Brachyspira intermedia PWS/A s 5 2
Bacteroides vulgatus ATCC 8482 s 5 2
Lachnospiraceae bacterium MA2020 s 5 2
Fibrobacter intestinalis s 5 2
[Clostridium] aminophilum DSM 10710 s 5 2
Pseudobutyrivibrio xylanivorans DSM 14809 s 8 3
Prevotella sp. MA2016 s 5 2
Erysipelotrichaceae bacterium NK3D112 s 5 2
Lachnospiraceae bacterium AC2029 s 11 4
Butyrivibrio sp. AE3004 s 5 2
Bacteroides fragilis s 5 2
[Clostridium] aminophilum s 5 2
Bacteroides thetaiotaomicron s 8 3
Bacteroides thetaiotaomicron s 11 4
Bacteroides fragilis s 5 2
Bacteroides fragilis s 5 2
Bacteroides fragilis s 5 2
Bacteroides fragilis s 5 2
Bacteroides ovatus s 14 5
Campylobacter sputorum s 5 2
Bacteroides ovatus s 11 4
Bacteroides fragilis s 5 2
Bacteroides vulgatus s 14 5
Bacteroides fragilis s 5 2
Bacteroides thetaiotaomicron s 5 2
Bacteroides vulgatus s 8 3
Bacteroides xylanisolvens s 5 2
Akkermansia sp. KLE1605 s 5 2
Methyloversatilis sp. RAC08 s 5 2
Bacteroides ovatus s 8 3
Bacteroides fragilis s 5 2
Bacteroides ovatus s 11 4
Bacteroides faecis MAJ27 s 8 3
Bacteroides thetaiotaomicron s 5 2
Lachnospiraceae bacterium s 5 2
Bacteroides xylanisolvens s 8 3
Bacteroides dorei s 11 4
Bacteroides ovatus s 5 2
Parabacteroides distasonis s 11 4
Megamonas hypermegale s 5 2
Bacteroides dorei s 5 2
Bacteroides thetaiotaomicron VPI-5482 s 11 4

*p=pathogen;s=symbiont