Effective results for Cyanothece sp. ATCC 51142 (eggnog40)
Summary
Number of putative secreted proteins: 509
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 182 eukaryotic-like domains, contained in 509 proteins (52 high, 457 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
| Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
|---|---|---|---|---|---|
| 43989.cce_2410 | (PF00060) (PF07885) | ER | |||
| 43989.cce_4662 | (PF04422) (PF04432) | (mitochondrial) | |||
| 43989.cce_4583 | (PF00060) (PF07885) | ER | |||
| 43989.cce_3498 | PF08527 (PF03068) | (mitochondrial) | |||
| 43989.cce_3196 | (PF00145) | (mitochondrial) | |||
| 43989.cce_3735 | (PF11016) | ER | |||
| 43989.cce_4529 | (PF00805) | ER | |||
| 43989.cce_4455 | (PF01761) | mitochondrial; (mitochondrial) | |||
| 43989.cce_5101 | (PF00805) | (mitochondrial) | |||
| 43989.cce_0630 | (PF02163) | ER | |||
| 43989.cce_3432 | (PF02163) | (ER); ER | |||
| 43989.cce_1163 | (PF12849) | ER | |||
| 43989.cce_4846 | (PF01926) | (mitochondrial) | |||
| 43989.cce_3083 | (PF00805) | ER | |||
| 43989.cce_0193 | (PF12740) | ER; (ER) | |||
| 43989.cce_3155 | (PF07927) | mitochondrial | |||
| 43989.cce_0287 | (PF03040) | (mitochondrial) | |||
| 43989.cce_1489 | (PF00490) | (mitochondrial); mitochondrial | |||
| 43989.cce_2129 | (PF11460) | ER | |||
| 43989.cce_2052 | (PF07466) | ER | |||
| 43989.cce_2728 | (PF13301) | ER | |||
| 43989.cce_2545 | (PF07885) | mitochondrial | |||
| 43989.cce_0764 | (PF09295) | (mitochondrial) | |||
| 43989.cce_3147 | (PF01926) | ER | |||
| 43989.cce_1369 | (PF07444) | ER | |||
| 43989.cce_0388 | (PF00690) PF13246 (PF00689) | ||||
| 43989.cce_2606 | (PF00690) PF13246 (PF00689) | ||||
| 43989.cce_3395 | (PF11909) | mitochondrial | |||
| 43989.cce_0776 | PF05757 | ER | |||
| 43989.cce_2952 | (PF01679) | ER; (ER) | |||
| 43989.cce_2959 | (PF16639) (PF01333) | (mitochondrial) | |||
| 43989.cce_0804 | (PF01789) | ER | |||
| 43989.cce_1958 | (PF07927) | (mitochondrial) | |||
| 43989.cce_1604 | (PF00224) | mitochondrial; (mitochondrial) | |||
| 43989.cce_4381 | (PF00924) | ER | |||
| 43989.cce_2385 | (PF00924) | ER | |||
| 43989.cce_1546 | PF10639 | ER | |||
| 43989.cce_0017 | (PF02163) | ER | |||
| 43989.cce_0129 | (PF11805) | (ER) | |||
| 43989.cce_1617 | (PF12740) | mitochondrial | |||
| 43989.cce_1050 | (PF12159) | ER | |||
| 43989.cce_2393 | (PF07927) | (mitochondrial) | |||
| 43989.cce_2572 | (PF01716) | ER | |||
| 43989.cce_3977 | (PF03055) | (mitochondrial) | |||
| 43989.cce_2885 | (PF00924) | mitochondrial | |||
| 43989.cce_0001 | PF03982 | ER | |||
| 43989.cce_0489 | (PF00924) | (mitochondrial) | |||
| 43989.cce_1849 | (PF11910) | (mitochondrial) | |||
| 43989.cce_2720 | (PF12263) | ER | |||
| 43989.cce_4233 | (PF05685) | ER | |||
| 43989.cce_2984 | (PF13449) | ER | |||
| 43989.cce_2980 | (PF00924) | (ER); ER | |||
| 43989.cce_1290 | (PF02507) | ER | |||
| 43989.cce_3633 | (PF13326) | ER | |||
| 43989.cce_1859 | (PF12849) | ER; (ER) | |||
| 43989.cce_4229 | (PF13358) | (mitochondrial) | |||
| 43989.cce_1272 | (PF00805) | ER | |||
| 43989.cce_5197 | (PF12849) | ER; (ER) | |||
| 43989.cce_5177 | (PF00224) | mitochondrial | |||
| 43989.cce_3916 | (PF00690) PF13246 (PF00689) | ||||
| 43989.cce_2178 | (PF07927) | (mitochondrial) | |||
| 43989.cce_0737 | (PF07444) | ER; (ER) | |||
| 43989.cce_0029 | (PF00805) | ER | |||
| 43989.cce_0209 | (PF00924) | ER; (ER) | |||
| 43989.cce_4694 | (PF05419) | ER | |||
| 43989.cce_3909 | (PF11152) | ER | |||
| 43989.cce_0436 | (PF03647) | ER | |||
| 43989.cce_0905 | (PF00805) | ER; (ER) | |||
| 43989.cce_0874 | (PF13301) | ER | |||
| 43989.cce_1659 | (PF00490) | (mitochondrial); mitochondrial | |||
| 43989.cce_1896 | (PF05023) | ER | |||
| 43989.cce_4119 | (PF02163) | (ER); ER | |||
| 43989.cce_4680 | (PF01737) | ER | |||
| 43989.cce_4759 | (PF03098) | (ER) | |||
| 43989.cce_4755 | (PF05685) | (mitochondrial) | |||
| 43989.cce_2539 | (PF01007) | ER | |||
| 43989.cce_3804 | (PF13358) | (mitochondrial) | |||
| 43989.cce_3487 | (PF04983) | (mitochondrial) | |||
| 43989.cce_0045 | (PF13358) | (mitochondrial) | |||
| 43989.cce_3064 | (PF07927) | mitochondrial; (mitochondrial) | |||
| 43989.cce_0260 | (PF01926) | (mitochondrial); (plastid) | |||
| 43989.cce_4307 | (PF03098) | ER | |||
| 43989.cce_1139 | (PF12849) | ER | |||
| 43989.cce_5143 | PF00058 | ER | |||
| 43989.cce_5094 | (PF12740) | ER | |||
| 43989.cce_3329 | (PF12046) | ER | |||
| 43989.cce_3255 | (PF00690) PF13246 (PF00689) | ||||
| 43989.cce_0071 | (PF01926) | ER | |||
| 43989.cce_0072 | (PF02325) | (ER) | |||
| 43989.cce_3673 | PF04278 | ER | |||
| 43989.cce_3672 | PF04278 | ER | |||
| 43989.cce_3676 | (PF00924) | mitochondrial | |||
| 43989.cce_0783 | (PF00924) | (mitochondrial) | |||
| 43989.cce_0522 | (PF05050) | ER | |||
| 43989.cce_0521 | (PF05050) | (mitochondrial) | |||
| 43989.cce_1120 | (PF13449) | ER | |||
| 43989.cce_4403 | (PF00805) | ER | |||
| 43989.cce_2334 | (PF03567) | (ER) | |||
| 43989.cce_3865 | (PF13358) | (mitochondrial) | |||
| 43989.cce_2848 | (PF07927) | (mitochondrial) | |||
| 43989.cce_4887 | PF03982 | ER | |||
| 43989.cce_0067 | (PF00690) PF13246 (PF00689) | ||||
| 43989.cce_1425 | (PF05685) | mitochondrial | |||
| 43989.cce_0400 | (PF01241) | (ER); plastid | |||
| 43989.cce_0403 | (PF00924) | ER | |||
| 43989.cce_0886 | (PF12849) | mitochondrial; (mitochondrial) | |||
| 43989.cce_0650 | (PF02325) | ER | |||
| 43989.cce_1219 | (PF07927) | (mitochondrial) | |||
| 43989.cce_4429 | (PF03567) | (mitochondrial); mitochondrial | |||
| 43989.cce_5202 | (PF00690) PF13246 (PF00689) | ||||
| 43989.cce_5061 | (PF00773) | mitochondrial; (mitochondrial) | |||
| 43989.cce_3993 | (PF00145) | (ER) | |||
| 43989.cce_2267 | (PF02163) | ER | |||
| 43989.cce_0640 | (PF13613) | (mitochondrial) | |||
| 43989.cce_3420 | (PF00224) | (mitochondrial) | |||
| 43989.cce_3736 | (PF13301) | (ER) | |||
| 43989.cce_4857 | (PF07683) (PF02492) | ||||
| 43989.cce_2078 | (PF07082) | (ER) | |||
| 43989.cce_4441 | (PF02468) | ER; not used | |||
| 43989.cce_4440 | (PF01761) | plastid | |||
| 43989.cce_4848 | (PF07683) (PF02492) | ||||
| 43989.cce_4843 | (PF07683) (PF02492) | ||||
| 43989.cce_3227 | (PF07683) (PF02492) | ||||
| 43989.cce_2285 | (PF00690) (PF00689) | ||||
| 43989.cce_1805 | (PF05969) | ER; not used | |||
| 43989.cce_0280 | (PF13911) | (mitochondrial) | |||
| 43989.cce_1487 | (PF08662) | (mitochondrial) | |||
| 43989.cce_1488 | (PF07683) (PF02492) | ||||
| 43989.cce_1027 | PF13384 (PF13592) | ||||
| 43989.cce_3239 | (PF07466) | (mitochondrial) | |||
| 43989.cce_0618 | (PF05685) | (ER) | |||
| 43989.cce_0148 | (PF00690) (PF00689) | ||||
| 43989.cce_1490 | (PF07683) (PF02492) | ||||
| 43989.cce_4280 | (PF00101) | (mitochondrial) | |||
| 43989.cce_4511 | (PF00145) | (ER) | |||
| 43989.cce_0602 | (PF00504) | (mitochondrial) | |||
| 43989.cce_1952 | (PF12452) | (ER) | |||
| 43989.cce_3607 | (PF03894) (PF09364) | ||||
| 43989.cce_4816 | (PF09990) | (ER) | |||
| 43989.cce_2092 | (PF13613) | (mitochondrial) | |||
| 43989.cce_1836 | (PF07927) | (mitochondrial) | |||
| 43989.cce_2628 | (PF05685) | plastid | |||
| 43989.cce_2404 | (PF05050) | (plastid) | |||
| 43989.cce_1491 | (PF07683) (PF02492) | ||||
| 43989.cce_2979 | PF13384 (PF13592) | ||||
| 43989.cce_0487 | (PF01192) | (mitochondrial) | |||
| 43989.cce_1289 | (PF01701) | ER; not used | |||
| 43989.cce_4725 | (PF00685) | (mitochondrial) | |||
| 43989.cce_4834 | (PF07683) (PF02492) | ||||
| 43989.cce_4833 | (PF07683) (PF02492) | ||||
| 43989.cce_2504 | (PF13613) | (mitochondrial) | |||
| 43989.cce_3101 | (PF00076) | (ER) | |||
| 43989.cce_1187 | (PF07683) (PF02492) | ||||
| 43989.cce_4007 | (PF00805) | (mitochondrial) | |||
| 43989.cce_4223 | (PF02931) PF02932 | ||||
| 43989.cce_3352 | (PF04422) (PF04432) | ||||
| 43989.cce_0736 | (PF06596) | ER; not used | |||
| 43989.cce_0113 | (PF00773) | (plastid) | |||
| 43989.cce_3110 | (PF05277) | (mitochondrial) | |||
| 43989.cce_5184 | (PF09364) (PF03894) | ||||
| 43989.cce_1500 | (PF07683) (PF02492) | ||||
| 43989.cce_3013 | (PF00805) | (mitochondrial) | |||
| 43989.cce_1092 | (PF01679) | ER; not used | |||
| 43989.cce_5085 | PF13384 (PF13592) | ||||
| 43989.cce_2225 | (PF09364) (PF03894) | ||||
| 43989.cce_1136 | (PF01926) | (mitochondrial) | |||
| 43989.cce_5095 | (PF05685) | (ER) | |||
| 43989.cce_3786 | (PF13613) | (mitochondrial) | |||
| 43989.cce_3479 | PF13384 (PF13592) | ||||
| 43989.cce_1305 | (PF00283) | (ER); not used | |||
| 43989.cce_1307 | (PF00284) (PF00283) | ||||
| 43989.cce_5134 | (PF13613) | (mitochondrial) | |||
| 43989.cce_5045 | (PF12204) | (plastid) | |||
| 43989.cce_0999 | (PF01241) | (plastid) | |||
| 43989.cce_3265 | (PF02529) | ER; not used | |||
| 43989.cce_4325 | (PF02427) | (mitochondrial) | |||
| 43989.cce_3308 | (PF13613) | (mitochondrial) | |||
| 43989.cce_3278 | (PF13613) | (mitochondrial) | |||
| 43989.cce_1696 | PF13384 (PF13592) | ||||
| 43989.cce_1819 | (PF00924) | (ER) | |||
| 43989.cce_5204 | (PF00690) (PF00689) | ||||
| 43989.cce_5117 | (PF13613) | (mitochondrial) | |||
| 43989.cce_2460 | (PF13613) | (mitochondrial) | |||
| 43989.cce_3199 | PF13384 | ||||
| 43989.cce_3197 | (PF13358) | ||||
| 43989.cce_0422 | (PF06745) | ||||
| 43989.cce_0513 | (PF05711) | ||||
| 43989.cce_1599 | (PF03912) | ||||
| 43989.cce_1591 | (PF05685) | ||||
| 43989.cce_0352 | (PF05685) | ||||
| 43989.cce_4636 | (PF00805) | ||||
| 43989.cce_1172 | (PF00610) | ||||
| 43989.cce_4528 | (PF00707) | ||||
| 43989.cce_4451 | (PF15071) | ||||
| 43989.cce_4852 | (PF00490) | ||||
| 43989.cce_2459 | PF13359 | ||||
| 43989.cce_3982 | (PF12849) | ||||
| 43989.cce_3853 | PF13384 | ||||
| 43989.cce_3851 | (PF13358) | ||||
| 43989.cce_3855 | (PF13358) | ||||
| 43989.cce_2581 | (PF07927) | ||||
| 43989.cce_3211 | (PF05685) | ||||
| 43989.cce_4057 | (PF05685) | ||||
| 43989.cce_4054 | (PF05685) | ||||
| 43989.cce_0639 | PF13359 | ||||
| 43989.cce_0989 | (PF00223) | ||||
| 43989.cce_0985 | (PF05685) | ||||
| 43989.cce_0631 | (PF05685) | ||||
| 43989.cce_0636 | (PF00124) | ||||
| 43989.cce_3501 | (PF00124) | ||||
| 43989.cce_3181 | (PF00805) | ||||
| 43989.cce_0187 | (PF13358) | ||||
| 43989.cce_0189 | PF13384 | ||||
| 43989.cce_2929 | (PF00805) | ||||
| 43989.cce_1341 | (PF02531) | ||||
| 43989.cce_0291 | (PF13355) | ||||
| 43989.cce_1904 | (PF01947) | ||||
| 43989.cce_0168 | (PF02672) | ||||
| 43989.cce_4623 | (PF08417) | ||||
| 43989.cce_1167 | (PF11347) | ||||
| 43989.cce_4530 | (PF05685) | ||||
| 43989.cce_0512 | (PF05050) | ||||
| 43989.cce_4446 | PF03742 | not used | |||
| 43989.cce_1013 | (PF00076) | ||||
| 43989.cce_2666 | (PF03092) | ||||
| 43989.cce_2665 | (PF03055) | ||||
| 43989.cce_2594 | (PF08847) | ||||
| 43989.cce_2064 | (PF00805) | ||||
| 43989.cce_0629 | (PF02672) | ||||
| 43989.cce_3089 | (PF11947) | ||||
| 43989.cce_0990 | (PF00223) | ||||
| 43989.cce_0625 | (PF05685) | ||||
| 43989.cce_3154 | (PF02941) | ||||
| 43989.cce_1807 | PF04755 | ||||
| 43989.cce_1571 | (PF12527) | ||||
| 43989.cce_1979 | (PF00805) | ||||
| 43989.cce_0377 | (PF05050) | ||||
| 43989.cce_1483 | (PF00924) | ||||
| 43989.cce_1480 | (PF03652) | ||||
| 43989.cce_4617 | (PF08854) | ||||
| 43989.cce_4619 | (PF10999) | ||||
| 43989.cce_4294 | (PF05419) | ||||
| 43989.cce_1393 | (PF11051) | ||||
| 43989.cce_4270 | (PF05685) | ||||
| 43989.cce_4271 | (PF00805) | ||||
| 43989.cce_1026 | (PF13358) | ||||
| 43989.cce_4476 | (PF10184) | ||||
| 43989.cce_2128 | (PF10716) | ||||
| 43989.cce_2055 | (PF08853) | ||||
| 43989.cce_2723 | (PF16166) | ||||
| 43989.cce_3893 | (PF05685) | ||||
| 43989.cce_0611 | (PF11965) | ||||
| 43989.cce_0762 | (PF00924) | ||||
| 43989.cce_3410 | (PF08802) | ||||
| 43989.cce_2943 | (PF00805) | ||||
| 43989.cce_0819 | (PF12095) | ||||
| 43989.cce_1565 | (PF07885) | ||||
| 43989.cce_3703 | (PF05685) | ||||
| 43989.cce_1961 | (PF01926) | ||||
| 43989.cce_1963 | (PF08417) | ||||
| 43989.cce_1964 | PF04755 | ||||
| 43989.cce_0140 | (PF05685) | ||||
| 43989.cce_0143 | (PF05685) | ||||
| 43989.cce_0146 | (PF00076) | ||||
| 43989.cce_1147 | (PF05685) | ||||
| 43989.cce_4518 | (PF02533) | not used | |||
| 43989.cce_4269 | (PF00685) | ||||
| 43989.cce_3809 | (PF12204) | ||||
| 43989.cce_2551 | (PF00145) | ||||
| 43989.cce_2552 | (PF04455) | ||||
| 43989.cce_3552 | (PF13358) | ||||
| 43989.cce_3550 | PF13384 | ||||
| 43989.cce_3554 | (PF10013) | not used | |||
| 43989.cce_3398 | (PF02943) | ||||
| 43989.cce_3394 | (PF02532) | not used | |||
| 43989.cce_3393 | (PF12600) | ||||
| 43989.cce_3171 | (PF01926) | ||||
| 43989.cce_2958 | (PF08802) | ||||
| 43989.cce_1820 | (PF00924) | ||||
| 43989.cce_1557 | (PF00805) | ||||
| 43989.cce_1559 | PF02005 | ||||
| 43989.cce_1732 | (PF01969) | ||||
| 43989.cce_1733 | (PF01969) | ||||
| 43989.cce_0392 | (PF01405) | not used | |||
| 43989.cce_0399 | (PF01094) | ||||
| 43989.cce_3609 | (PF05685) | ||||
| 43989.cce_1040 | (PF01926) | ||||
| 43989.cce_4817 | (PF09990) | ||||
| 43989.cce_3411 | (PF00124) | ||||
| 43989.cce_4926 | (PF05685) | ||||
| 43989.cce_4927 | (PF03055) | ||||
| 43989.cce_5038 | (PF07927) | ||||
| 43989.cce_2704 | (PF05685) | ||||
| 43989.cce_2708 | (PF00805) | ||||
| 43989.cce_2099 | (PF05050) | ||||
| 43989.cce_4244 | (PF13358) | ||||
| 43989.cce_2093 | PF13359 | ||||
| 43989.cce_4712 | (PF13358) | ||||
| 43989.cce_2149 | (PF05685) | ||||
| 43989.cce_3549 | (PF05711) | ||||
| 43989.cce_0947 | (PF05685) | ||||
| 43989.cce_2894 | (PF05685) | ||||
| 43989.cce_0701 | (PF00224) | ||||
| 43989.cce_3165 | (PF02341) | ||||
| 43989.cce_3164 | (PF00101) | ||||
| 43989.cce_1545 | (PF00805) | ||||
| 43989.cce_1543 | (PF00504) | not used | |||
| 43989.cce_0837 | PF03982 | ||||
| 43989.cce_1943 | (PF09366) | ||||
| 43989.cce_1942 | (PF00076) | ||||
| 43989.cce_0492 | (PF00805) | ||||
| 43989.cce_1726 | (PF05685) | ||||
| 43989.cce_3619 | (PF05685) | ||||
| 43989.cce_0231 | (PF01192) | ||||
| 43989.cce_4716 | (PF06745) | ||||
| 43989.cce_4242 | (PF13358) | ||||
| 43989.cce_4713 | (PF13592) | ||||
| 43989.cce_4240 | PF13384 | ||||
| 43989.cce_1051 | (PF05685) | ||||
| 43989.cce_1058 | (PF06799) | ||||
| 43989.cce_4397 | (PF00805) | ||||
| 43989.cce_4661 | (PF05685) | ||||
| 43989.cce_2623 | (PF01926) | ||||
| 43989.cce_2625 | (PF06514) | ||||
| 43989.cce_2576 | (PF05685) | ||||
| 43989.cce_2578 | (PF00707) | ||||
| 43989.cce_2089 | (PF10162) | ||||
| 43989.cce_3979 | (PF00805) | ||||
| 43989.cce_3570 | PF04755 | ||||
| 43989.cce_2978 | (PF13358) | ||||
| 43989.cce_2972 | (PF13358) | ||||
| 43989.cce_3752 | (PF10693) | ||||
| 43989.cce_3598 | (PF07885) | ||||
| 43989.cce_3595 | (PF05542) | ||||
| 43989.cce_0488 | (PF05419) | ||||
| 43989.cce_0485 | (PF01926) | ||||
| 43989.cce_1288 | PF00305 | ||||
| 43989.cce_0131 | (PF12049) | ||||
| 43989.cce_1666 | (PF01926) | ||||
| 43989.cce_4836 | (PF05685) | ||||
| 43989.cce_0028 | (PF05685) | ||||
| 43989.cce_4905 | (PF01007) | ||||
| 43989.cce_2503 | PF13359 | ||||
| 43989.cce_3964 | (PF02605) | ||||
| 43989.cce_3963 | (PF02605) | ||||
| 43989.cce_3962 | (PF00796) | not used | |||
| 43989.cce_3562 | (PF00805) | ||||
| 43989.cce_3561 | (PF00805) | ||||
| 43989.cce_3566 | (PF05685) | ||||
| 43989.cce_3362 | (PF08855) | ||||
| 43989.cce_3102 | (PF00805) | ||||
| 43989.cce_3299 | (PF10674) | ||||
| 43989.cce_1526 | (PF06298) | not used | |||
| 43989.cce_3583 | (PF00504) | not used | |||
| 43989.cce_1984 | (PF05685) | ||||
| 43989.cce_0454 | (PF11341) | ||||
| 43989.cce_0102 | (PF00076) | ||||
| 43989.cce_1672 | (PF08975) | ||||
| 43989.cce_1677 | (PF10063) | ||||
| 43989.cce_4001 | (PF06745) | ||||
| 43989.cce_1076 | (PF05419) | ||||
| 43989.cce_4358 | (PF11965) | ||||
| 43989.cce_4826 | (PF00504) | ||||
| 43989.cce_2371 | (PF11210) | ||||
| 43989.cce_2774 | (PF00924) | ||||
| 43989.cce_2515 | (PF03055) | ||||
| 43989.cce_2519 | (PF12263) | ||||
| 43989.cce_2172 | (PF02392) | ||||
| 43989.cce_2204 | (PF00685) | ||||
| 43989.cce_2202 | (PF05685) | ||||
| 43989.cce_0932 | PF13384 | ||||
| 43989.cce_0934 | (PF13358) | ||||
| 43989.cce_0846 | (PF00690) | ||||
| 43989.cce_0025 | (PF05685) | ||||
| 43989.cce_0362 | (PF04423) | ||||
| 43989.cce_0111 | (PF05685) | ||||
| 43989.cce_0441 | (PF11264) | ||||
| 43989.cce_0116 | (PF13301) | ||||
| 43989.cce_4585 | (PF00924) | ||||
| 43989.cce_4580 | PF01744 | ||||
| 43989.cce_4581 | (PF00805) | ||||
| 43989.cce_1082 | (PF05685) | ||||
| 43989.cce_1248 | (PF07885) | ||||
| 43989.cce_4106 | (PF09990) | ||||
| 43989.cce_4107 | (PF09990) | ||||
| 43989.cce_4108 | (PF09990) | ||||
| 43989.cce_4366 | (PF05685) | not used | |||
| 43989.cce_4698 | (PF09353) | ||||
| 43989.cce_4210 | (PF00805) | ||||
| 43989.cce_4212 | (PF00805) | ||||
| 43989.cce_4745 | (PF00145) | ||||
| 43989.cce_2694 | (PF11378) | ||||
| 43989.cce_5161 | PF13359 | ||||
| 43989.cce_1924 | (PF01926) | ||||
| 43989.cce_3900 | (PF11267) | ||||
| 43989.cce_3346 | (PF00773) | ||||
| 43989.cce_3831 | (PF02656) | ||||
| 43989.cce_2520 | (PF04483) | ||||
| 43989.cce_3838 | (PF04983) | ||||
| 43989.cce_3123 | (PF00685) | ||||
| 43989.cce_3122 | (PF01761) | ||||
| 43989.cce_1504 | (PF07927) | ||||
| 43989.cce_0057 | (PF12576) | ||||
| 43989.cce_3658 | (PF11317) | ||||
| 43989.cce_1652 | PF01744 | ||||
| 43989.cce_0278 | (PF00805) | ||||
| 43989.cce_4596 | (PF01926) | ||||
| 43989.cce_1090 | (PF03522) | ||||
| 43989.cce_4377 | (PF06485) | ||||
| 43989.cce_4683 | (PF00924) | ||||
| 43989.cce_2753 | (PF05685) | ||||
| 43989.cce_5084 | (PF13358) | ||||
| 43989.cce_2350 | (PF12617) | ||||
| 43989.cce_3336 | (PF00076) | ||||
| 43989.cce_3806 | PF13384 | ||||
| 43989.cce_3808 | (PF13358) | ||||
| 43989.cce_3247 | (PF05685) | ||||
| 43989.cce_0917 | (PF05685) | ||||
| 43989.cce_0047 | (PF00805) | not used | |||
| 43989.cce_3793 | PF13384 | ||||
| 43989.cce_1404 | (PF05685) | ||||
| 43989.cce_1405 | (PF05685) | ||||
| 43989.cce_0463 | (PF03652) | ||||
| 43989.cce_3464 | (PF02325) | ||||
| 43989.cce_0868 | (PF05685) | ||||
| 43989.cce_0862 | (PF11833) | ||||
| 43989.cce_0860 | (PF00737) | ||||
| 43989.cce_0864 | (PF05685) | ||||
| 43989.cce_0267 | (PF00124) | ||||
| 43989.cce_2440 | (PF00924) | ||||
| 43989.cce_4411 | (PF05685) | ||||
| 43989.cce_2030 | (PF05685) | ||||
| 43989.cce_2320 | (PF05685) | ||||
| 43989.cce_2321 | (PF05685) | ||||
| 43989.cce_3495 | (PF13449) | ||||
| 43989.cce_3494 | (PF13449) | ||||
| 43989.cce_3785 | PF13359 | ||||
| 43989.cce_3072 | (PF05685) | ||||
| 43989.cce_0785 | (PF05685) | ||||
| 43989.cce_3477 | (PF00124) | ||||
| 43989.cce_3473 | (PF00145) | ||||
| 43989.cce_0893 | (PF05151) | not used | |||
| 43989.cce_1304 | PF02419 | not used | |||
| 43989.cce_1303 | (PF01788) | not used | |||
| 43989.cce_0526 | (PF05050) | ||||
| 43989.cce_0255 | (PF11623) | not used | |||
| 43989.cce_0090 | (PF00805) | ||||
| 43989.cce_4574 | (PF00924) | ||||
| 43989.cce_1237 | (PF05419) | ||||
| 43989.cce_1236 | (PF05685) | ||||
| 43989.cce_5133 | PF13359 | ||||
| 43989.cce_4799 | (PF00805) | ||||
| 43989.cce_2025 | (PF05685) | ||||
| 43989.cce_2792 | (PF03912) | ||||
| 43989.cce_2791 | (PF08041) | not used | |||
| 43989.cce_3863 | PF13384 | ||||
| 43989.cce_3861 | (PF13358) | ||||
| 43989.cce_4333 | (PF05685) | ||||
| 43989.cce_0660 | (PF00124) | ||||
| 43989.cce_3689 | (PF14249) | ||||
| 43989.cce_3447 | (PF05685) | ||||
| 43989.cce_0887 | (PF12849) | ||||
| 43989.cce_1330 | (PF04481) | ||||
| 43989.cce_0247 | (PF00924) | ||||
| 43989.cce_0088 | (PF11371) | ||||
| 43989.cce_4548 | (PF05421) | ||||
| 43989.cce_1753 | (PF04839) | ||||
| 43989.cce_2013 | (PF06485) | ||||
| 43989.cce_3157 | (PF00773) | ||||
| 43989.cce_3302 | (PF05685) | ||||
| 43989.cce_3307 | PF13359 | ||||
| 43989.cce_3305 | (PF05685) | ||||
| 43989.cce_3877 | (PF00924) | ||||
| 43989.cce_3279 | PF13359 | ||||
| 43989.cce_3272 | (PF00805) | ||||
| 43989.cce_1925 | (PF01926) | ||||
| 43989.cce_1927 | (PF11998) | ||||
| 43989.cce_0430 | (PF05542) | ||||
| 43989.cce_3694 | (PF09366) | ||||
| 43989.cce_3450 | (PF05685) | ||||
| 43989.cce_2903 | (PF02492) | ||||
| 43989.cce_1328 | (PF01926) | ||||
| 43989.cce_1327 | (PF05685) | ||||
| 43989.cce_1213 | (PF00145) | ||||
| 43989.cce_1216 | (PF05685) | ||||
| 43989.cce_1742 | (PF05685) | ||||
| 43989.cce_1697 | (PF13358) | ||||
| 43989.cce_2214 | (PF00504) | not used | |||
| 43989.cce_2215 | (PF03055) | ||||
| 43989.cce_1106 | (PF11282) | ||||
| 43989.cce_1101 | PF13359 | ||||
| 43989.cce_1109 | (PF05685) | ||||
| 43989.cce_4556 | (PF03567) | ||||
| 43989.cce_4550 | (PF03567) | ||||
| 43989.cce_4330 | (PF10664) | ||||
| 43989.cce_4335 | (PF13358) | ||||
| 43989.cce_4334 | (PF13592) | ||||
| 43989.cce_5063 | (PF00773) | ||||
| 43989.cce_2485 | (PF00124) | ||||
| 43989.cce_5116 | PF13359 | ||||
| 43989.cce_2648 | PF00305 | ||||
| 43989.cce_2469 | (PF05685) | ||||
| 43989.cce_3844 | (PF02656) | ||||
| 43989.cce_3845 | (PF02656) | ||||
| 43989.cce_3846 | (PF02656) | ||||
| 43989.cce_3843 | (PF02656) | ||||
| 43989.cce_2262 | PF13384 | ||||
| 43989.cce_2260 | (PF13358) | ||||
| 43989.cce_2265 | (PF11360) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)
Genome based results
Summary
- Gram negative: YES (FDR = 0.5 %)
- Functional Type III secretion system: NO (FDR = 12.5 %)
- Functional Type IV secretion system: NO (FDR = 7.2 %)
- Functional Type VI secretion system: NO (FDR = 7.7 %)
Individual results for each secretion system
- List of 100 most important COGs/NOGs for prediction of functional Type III secretion system (T3_top100_COGS.xls)
- List of 100 most important COGs/NOGs for prediction of functional Type IV secretion system (T4_top100_COGS.xls)
- List of 100 most important COGs/NOGs for prediction of functional Type VI secretion system (T6_top100_COGS.xls)
- List of COGs assigned to Type III secretion system in KEGG (T3SS_KEGG_cmp.xls)
- List of COGs assigned to Type IV secretion system in KEGG (T4SS_KEGG_cmp.xls)
- List of COGs assigned to Type VI secretion system in KEGG (T6SS_KEGG_cmp.xls)
Parameters:
==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================
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Contact
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- +43 1 4277 876681
- contact.cube@univie.ac.at
