Metamenu

Genomes encoding eukaryotic-like proteins

PF13358 DDE superfamily endonuclease

Copy number in non-pathogens:
Mean=0.66 Stddev=2.49

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bradyrhizobium diazoefficiens s 7 20
Orientia tsutsugamushi str. Ikeda s 7 20
Microcystis aeruginosa NIES-843 s 14 37
Xanthomonas oryzae pv. oryzae MAFF 311018 s 4 13
Sinorhizobium fredii HH103 s 4 13
Xenorhabdus nematophila F1 s 4 13
Xenorhabdus bovienii SS-2004 s 4 11
Orientia tsutsugamushi str. Boryong s 5 14
Photorhabdus luminescens subsp. laumondii TTO1 s 4 12
Xenorhabdus nematophila ATCC 19061 s 14 38
Neisseria sicca ATCC 29256 s 4 12
Pleurocapsa sp. PCC 7319 s 4 13
Microvirga lotononidis s 9 25
Acinetobacter baumannii 348935 s 4 11
Shigella dysenteriae 1012 s 10 27
Propionibacterium acidifaciens F0233 s 23 59
Rickettsia endosymbiont of Ixodes scapularis s 10 26
Leptospira santarosai str. MOR084 s 4 11
Leptospira santarosai str. CBC379 s 5 14
Leptospira santarosai str. 2000027870 s 5 15
Burkholderia sp. WSM4176 s 4 13
Propionibacterium acidifaciens DSM 21887 s 8 23
Streptococcus pneumoniae 2090008 s 4 11
Pseudomonas syringae pv. actinidiae ICMP 18708 s 5 14
Holospora undulata HU1 s 16 41
Holospora obtusa F1 s 13 34
Frankia sp. EAN1pec s 6 16
Verminephrobacter eiseniae EF01-2 s 6 16
'Nostoc azollae' 0708 s 8 23
Xanthomonas oryzae pv. oryzae PXO99A s 6 18
Acaryochloris marina MBIC11017 s 4 12
Pseudomonas syringae pv. actinidiae ICMP 18884 s 5 14
Piscirickettsia salmonis s 12 33
Burkholderia ubonensis s 6 16
Burkholderia ubonensis s 4 12
Xanthomonas oryzae pv. oryzae s 4 12
Endozoicomonas ascidiicola s 6 17
Endozoicomonas ascidiicola s 10 27
Vibrio mimicus s 4 11
Xanthomonas oryzae pv. oryzae s 6 16
Xanthomonas oryzae pv. oryzae s 4 11
Xanthomonas oryzae pv. oryzae s 4 13
Xanthomonas oryzae pv. oryzae s 6 16
Xanthomonas oryzae pv. oryzae s 6 17
Xanthomonas oryzae pv. oryzae s 4 13
Xanthomonas oryzae pv. oryzae s 4 13
Xanthomonas oryzae pv. oryzae s 4 13
Xanthomonas oryzae pv. oryzae s 4 13
Piscirickettsia salmonis s 13 35
Piscirickettsia salmonis s 13 35
Piscirickettsia salmonis s 13 35
Piscirickettsia salmonis s 13 35
Piscirickettsia salmonis s 11 30
Hymenobacter sp. PAMC 26628 s 6 16
Lachnoclostridium sp. YL32 s 5 14
Orientia tsutsugamushi s 4 12
Nocardia seriolae s 4 13
Pseudomonas syringae pv. actinidiae s 5 14
Pseudomonas syringae pv. actinidiae s 5 14
Burkholderia ubonensis s 6 16
Burkholderia ubonensis s 4 12
Pseudomonas syringae pv. actinidiae s 5 14
Pseudomonas syringae pv. actinidiae s 5 15
Pseudomonas syringae pv. actinidiae s 5 15
Sinorhizobium meliloti s 4 12
Francisella tularensis subsp. tularensis SCHU S4 s 18 46
Bradyrhizobium diazoefficiens USDA 110 s 7 19
Sinorhizobium meliloti 1021 s 4 13
Sinorhizobium medicae WSM419 s 4 12
Sinorhizobium fredii NGR234 s 4 12

*p=pathogen;s=symbiont