43989.cce_0640	PF13613	Helix-turn-helix of DDE superfamily endonuclease	7
43989.cce_3199	PF13384	Homeodomain-like domain	13
43989.cce_3196	PF00145	C-5 cytosine-specific DNA methylase	5
43989.cce_3197	PF13358	DDE superfamily endonuclease	6
43989.cce_0422	PF06745	KaiC	4
43989.cce_3420	PF00224	Pyruvate kinase, barrel domain	4
43989.cce_0278	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_2980	PF00924	Mechanosensitive ion channel	7
43989.cce_1805	PF05969	Photosystem II complex subunit Ycf12	8
43989.cce_0513	PF05711	Macrocin-O-methyltransferase (TylF)	4
43989.cce_1599	PF03912	Psb28 protein	8
43989.cce_1591	PF05685	Putative restriction endonuclease	7
43989.cce_3736	PF13301	Protein of unknown function (DUF4079)	8
43989.cce_3735	PF11016	Protein of unknown function (DUF2854)	6
43989.cce_0352	PF05685	Putative restriction endonuclease	7
43989.cce_1172	PF00610	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	9
43989.cce_4528	PF00707	Translation initiation factor IF-3, C-terminal domain	4
43989.cce_4529	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_4451	PF15071	Transmembrane family 220, helix	8
43989.cce_4455	PF01761	3-dehydroquinate synthase	5
43989.cce_4857	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_4857	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_4852	PF00490	Delta-aminolevulinic acid dehydratase	6
43989.cce_5038	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_5101	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_2459	PF13359	DDE superfamily endonuclease	10
43989.cce_3853	PF13384	Homeodomain-like domain	13
43989.cce_3851	PF13358	DDE superfamily endonuclease	6
43989.cce_3855	PF13358	DDE superfamily endonuclease	6
43989.cce_2581	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_2078	PF07082	Protein of unknown function (DUF1350)	5
43989.cce_3211	PF05685	Putative restriction endonuclease	7
43989.cce_4057	PF05685	Putative restriction endonuclease	7
43989.cce_4054	PF05685	Putative restriction endonuclease	7
43989.cce_0639	PF13359	DDE superfamily endonuclease	10
43989.cce_0989	PF00223	Photosystem I psaA/psaB protein	5
43989.cce_0985	PF05685	Putative restriction endonuclease	7
43989.cce_0630	PF02163	Peptidase family M50	4
43989.cce_0636	PF00124	Photosynthetic reaction centre protein	9
43989.cce_3501	PF00124	Photosynthetic reaction centre protein	9
43989.cce_0999	PF01241	Photosystem I psaG / psaK	8
43989.cce_3181	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_0187	PF13358	DDE superfamily endonuclease	6
43989.cce_0189	PF13384	Homeodomain-like domain	13
43989.cce_2929	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3432	PF02163	Peptidase family M50	4
43989.cce_1341	PF02531	PsaD	6
43989.cce_0291	PF13355	Protein of unknown function (DUF4101)	4
43989.cce_1904	PF01947	Protein of unknown function (DUF98)	5
43989.cce_0168	PF02672	CP12 domain	5
43989.cce_4623	PF08417	Pheophorbide a oxygenase	9
43989.cce_1163	PF12849	PBP superfamily domain	4
43989.cce_1167	PF11347	Protein of unknown function (DUF3148)	6
43989.cce_1984	PF05685	Putative restriction endonuclease	7
43989.cce_4530	PF05685	Putative restriction endonuclease	7
43989.cce_0512	PF05050	Methyltransferase FkbM domain	5
43989.cce_4441	PF02468	Photosystem II reaction centre N protein (psbN)	6
43989.cce_4440	PF01761	3-dehydroquinate synthase	5
43989.cce_4446	PF03742	PetN	10
43989.cce_1013	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	5
43989.cce_0102	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	5
43989.cce_4848	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_4848	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_4846	PF01926	50S ribosome-binding GTPase	4
43989.cce_4843	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_4843	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_2666	PF03092	BT1 family	5
43989.cce_2665	PF03055	Retinal pigment epithelial membrane protein	6
43989.cce_2440	PF00924	Mechanosensitive ion channel	7
43989.cce_2594	PF08847	Domain of unknown function (DUF1817)	7
43989.cce_2064	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3013	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3227	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_3227	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_2285	PF00690	Cation transporter/ATPase, N-terminus	7
43989.cce_2285	PF00689	Cation transporting ATPase, C-terminus	7
43989.cce_3089	PF11947	Protein of unknown function (DUF3464)	6
43989.cce_0990	PF00223	Photosystem I psaA/psaB protein	5
43989.cce_0625	PF05685	Putative restriction endonuclease	7
43989.cce_2848	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_0193	PF12740	Chlorophyllase enzyme	6
43989.cce_3155	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_1807	PF04755	PAP_fibrillin	12
43989.cce_0287	PF03040	CemA family	4
43989.cce_0280	PF13911	AhpC/TSA antioxidant enzyme	6
43989.cce_1571	PF12527	Protein of unknown function (DUF3727)	6
43989.cce_1979	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_0377	PF05050	Methyltransferase FkbM domain	5
43989.cce_1483	PF00924	Mechanosensitive ion channel	7
43989.cce_1480	PF03652	Holliday junction resolvase	4
43989.cce_1487	PF08662	Eukaryotic translation initiation factor eIF2A	7
43989.cce_1488	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_1488	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_1489	PF00490	Delta-aminolevulinic acid dehydratase	6
43989.cce_4617	PF08854	Domain of unknown function (DUF1824)	6
43989.cce_4619	PF10999	Protein of unknown function (DUF2839)	4
43989.cce_4294	PF05419	GUN4-like	5
43989.cce_1393	PF11051	Mannosyltransferase putative	9
43989.cce_4270	PF05685	Putative restriction endonuclease	7
43989.cce_4271	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_1026	PF13358	DDE superfamily endonuclease	6
43989.cce_1027	PF13592	Winged helix-turn helix	5
43989.cce_1027	PF13384	Homeodomain-like domain	13
43989.cce_4636	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_4476	PF10184	Uncharacterized conserved protein (DUF2358)	5
43989.cce_2128	PF10716	NADH dehydrogenase transmembrane subunit	7
43989.cce_2129	PF11460	Protein of unknown function (DUF3007)	6
43989.cce_2052	PF07466	Protein of unknown function (DUF1517)	7
43989.cce_2728	PF13301	Protein of unknown function (DUF4079)	8
43989.cce_3893	PF05685	Putative restriction endonuclease	7
43989.cce_2545	PF07885	Ion channel	4
43989.cce_4333	PF05685	Putative restriction endonuclease	7
43989.cce_2055	PF08853	Domain of unknown function (DUF1823)	6
43989.cce_2723	PF16166	Chloroplast import apparatus Tic20-like	6
43989.cce_0611	PF11965	Domain of unknown function (DUF3479)	6
43989.cce_0618	PF05685	Putative restriction endonuclease	7
43989.cce_0400	PF01241	Photosystem I psaG / psaK	8
43989.cce_1491	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_1491	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_0762	PF00924	Mechanosensitive ion channel	7
43989.cce_0764	PF09295	ChAPs (Chs5p-Arf1p-binding proteins)	7
43989.cce_3411	PF00124	Photosynthetic reaction centre protein	9
43989.cce_2943	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3239	PF07466	Protein of unknown function (DUF1517)	7
43989.cce_1369	PF07444	Ycf66 protein N-terminus	6
43989.cce_1565	PF07885	Ion channel	4
43989.cce_3703	PF05685	Putative restriction endonuclease	7
43989.cce_1961	PF01926	50S ribosome-binding GTPase	4
43989.cce_1963	PF08417	Pheophorbide a oxygenase	9
43989.cce_1964	PF04755	PAP_fibrillin	12
43989.cce_0388	PF00690	Cation transporter/ATPase, N-terminus	7
43989.cce_0388	PF00689	Cation transporting ATPase, C-terminus	7
43989.cce_0388	PF13246	Cation transport ATPase (P-type)	15
43989.cce_0148	PF00690	Cation transporter/ATPase, N-terminus	7
43989.cce_0148	PF00689	Cation transporting ATPase, C-terminus	7
43989.cce_1490	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_1490	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_1942	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	5
43989.cce_0140	PF05685	Putative restriction endonuclease	7
43989.cce_0143	PF05685	Putative restriction endonuclease	7
43989.cce_0146	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	5
43989.cce_4826	PF00504	Chlorophyll A-B binding protein	7
43989.cce_1147	PF05685	Putative restriction endonuclease	7
43989.cce_4280	PF00101	Ribulose bisphosphate carboxylase, small chain	4
43989.cce_4511	PF00145	C-5 cytosine-specific DNA methylase	5
43989.cce_4518	PF02533	Photosystem II 4 kDa reaction centre component	7
43989.cce_4269	PF00685	Sulfotransferase domain	5
43989.cce_3806	PF13384	Homeodomain-like domain	13
43989.cce_3808	PF13358	DDE superfamily endonuclease	6
43989.cce_2606	PF13246	Cation transport ATPase (P-type)	15
43989.cce_2606	PF00689	Cation transporting ATPase, C-terminus	7
43989.cce_2606	PF00690	Cation transporter/ATPase, N-terminus	7
43989.cce_2551	PF00145	C-5 cytosine-specific DNA methylase	5
43989.cce_2552	PF04455	LOR/SDH bifunctional enzyme conserved region	6
43989.cce_3552	PF13358	DDE superfamily endonuclease	6
43989.cce_3550	PF13384	Homeodomain-like domain	13
43989.cce_3554	PF10013	Uncharacterized protein conserved in bacteria (DUF2256)	6
43989.cce_3398	PF02943	Ferredoxin thioredoxin reductase catalytic beta chain	5
43989.cce_3394	PF02532	Photosystem II reaction centre I protein (PSII 4.8 kDa protein)	9
43989.cce_3395	PF11909	NADH-quinone oxidoreductase cyanobacterial subunit N	6
43989.cce_3393	PF12600	Protein of unknown function (DUF3769)	6
43989.cce_0776	PF05757	Oxygen evolving enhancer protein 3 (PsbQ)	16
43989.cce_3171	PF01926	50S ribosome-binding GTPase	4
43989.cce_2952	PF01679	Proteolipid membrane potential modulator	6
43989.cce_2959	PF16639	Apocytochrome F, N-terminal	6
43989.cce_2959	PF01333	Apocytochrome F, C-terminal	6
43989.cce_2958	PF08802	Cytochrome B6-F complex Fe-S subunit	7
43989.cce_0602	PF00504	Chlorophyll A-B binding protein	7
43989.cce_1820	PF00924	Mechanosensitive ion channel	7
43989.cce_0804	PF01789	PsbP	4
43989.cce_1557	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_1559	PF02005	N2,N2-dimethylguanosine tRNA methyltransferase	10
43989.cce_1952	PF12452	Protein of unknown function (DUF3685)	6
43989.cce_1958	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_1732	PF01969	Protein of unknown function DUF111	4
43989.cce_1733	PF01969	Protein of unknown function DUF111	4
43989.cce_0392	PF01405	Photosystem II reaction centre T protein	8
43989.cce_0399	PF01094	Receptor family ligand binding region	5
43989.cce_3609	PF05685	Putative restriction endonuclease	7
43989.cce_3607	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase	4
43989.cce_3607	PF09364	XFP N-terminal domain	4
43989.cce_1604	PF00224	Pyruvate kinase, barrel domain	4
43989.cce_1040	PF01926	50S ribosome-binding GTPase	4
43989.cce_3982	PF12849	PBP superfamily domain	4
43989.cce_4816	PF09990	Predicted membrane protein (DUF2231)	9
43989.cce_4817	PF09990	Predicted membrane protein (DUF2231)	9
43989.cce_3147	PF01926	50S ribosome-binding GTPase	4
43989.cce_3410	PF08802	Cytochrome B6-F complex Fe-S subunit	7
43989.cce_2385	PF00924	Mechanosensitive ion channel	7
43989.cce_4926	PF05685	Putative restriction endonuclease	7
43989.cce_4927	PF03055	Retinal pigment epithelial membrane protein	6
43989.cce_2704	PF05685	Putative restriction endonuclease	7
43989.cce_2708	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_2099	PF05050	Methyltransferase FkbM domain	5
43989.cce_4244	PF13358	DDE superfamily endonuclease	6
43989.cce_2092	PF13613	Helix-turn-helix of DDE superfamily endonuclease	7
43989.cce_2093	PF13359	DDE superfamily endonuclease	10
43989.cce_4712	PF13358	DDE superfamily endonuclease	6
43989.cce_2149	PF05685	Putative restriction endonuclease	7
43989.cce_2410	PF07885	Ion channel	4
43989.cce_2410	PF00060	Ligand-gated ion channel	8
43989.cce_3549	PF05711	Macrocin-O-methyltransferase (TylF)	4
43989.cce_0947	PF05685	Putative restriction endonuclease	7
43989.cce_2894	PF05685	Putative restriction endonuclease	7
43989.cce_0701	PF00224	Pyruvate kinase, barrel domain	4
43989.cce_3165	PF02341	RbcX protein	8
43989.cce_3164	PF00101	Ribulose bisphosphate carboxylase, small chain	4
43989.cce_0819	PF12095	Protein of unknown function (DUF3571)	6
43989.cce_1050	PF12159	Protein of unknown function (DUF3593)	6
43989.cce_1546	PF10639	Putative transmembrane family 234	18
43989.cce_1545	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_1543	PF00504	Chlorophyll A-B binding protein	7
43989.cce_0837	PF03982	Diacylglycerol acyltransferase	17
43989.cce_0017	PF02163	Peptidase family M50	4
43989.cce_1943	PF09366	Protein of unknown function (DUF1997)	6
43989.cce_0492	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_1726	PF05685	Putative restriction endonuclease	7
43989.cce_3619	PF05685	Putative restriction endonuclease	7
43989.cce_0129	PF11805	Protein of unknown function (DUF3326)	6
43989.cce_1836	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_1617	PF12740	Chlorophyllase enzyme	6
43989.cce_0231	PF01192	RNA polymerase Rpb6	5
43989.cce_4716	PF06745	KaiC	4
43989.cce_4242	PF13358	DDE superfamily endonuclease	6
43989.cce_4713	PF13592	Winged helix-turn helix	5
43989.cce_4240	PF13384	Homeodomain-like domain	13
43989.cce_1051	PF05685	Putative restriction endonuclease	7
43989.cce_1058	PF06799	Protein of unknown function (DUF1230)	6
43989.cce_4397	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_4661	PF05685	Putative restriction endonuclease	7
43989.cce_4662	PF04422	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term	6
43989.cce_4662	PF04432	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus	5
43989.cce_2623	PF01926	50S ribosome-binding GTPase	4
43989.cce_2625	PF06514	Photosystem II 12 kDa extrinsic protein (PsbU)	6
43989.cce_2628	PF05685	Putative restriction endonuclease	7
43989.cce_2393	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_2576	PF05685	Putative restriction endonuclease	7
43989.cce_2572	PF01716	Manganese-stabilising protein / photosystem II polypeptide	6
43989.cce_2578	PF00707	Translation initiation factor IF-3, C-terminal domain	4
43989.cce_2089	PF10162	G8 domain	7
43989.cce_3977	PF03055	Retinal pigment epithelial membrane protein	6
43989.cce_3979	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3570	PF04755	PAP_fibrillin	12
43989.cce_2885	PF00924	Mechanosensitive ion channel	7
43989.cce_0631	PF05685	Putative restriction endonuclease	7
43989.cce_2979	PF13592	Winged helix-turn helix	5
43989.cce_2979	PF13384	Homeodomain-like domain	13
43989.cce_2978	PF13358	DDE superfamily endonuclease	6
43989.cce_4325	PF02427	Photosystem I reaction centre subunit IV / PsaE	6
43989.cce_2972	PF13358	DDE superfamily endonuclease	6
43989.cce_0001	PF03982	Diacylglycerol acyltransferase	17
43989.cce_3752	PF10693	Protein of unknown function (DUF2499)	6
43989.cce_3598	PF07885	Ion channel	4
43989.cce_3595	PF05542	Protein of unknown function (DUF760)	7
43989.cce_0489	PF00924	Mechanosensitive ion channel	7
43989.cce_0488	PF05419	GUN4-like	5
43989.cce_0485	PF01926	50S ribosome-binding GTPase	4
43989.cce_0487	PF01192	RNA polymerase Rpb6	5
43989.cce_1288	PF00305	Lipoxygenase	10
43989.cce_1289	PF01701	Photosystem I reaction centre subunit IX / PsaJ	6
43989.cce_0131	PF12049	Protein of unknown function (DUF3531)	6
43989.cce_1849	PF11910	Cyanobacterial and plant NDH-1 subunit O	6
43989.cce_2720	PF12263	Protein of unknown function (DUF3611)	7
43989.cce_1666	PF01926	50S ribosome-binding GTPase	4
43989.cce_4233	PF05685	Putative restriction endonuclease	7
43989.cce_4834	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_4834	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_4836	PF05685	Putative restriction endonuclease	7
43989.cce_0029	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_0846	PF00690	Cation transporter/ATPase, N-terminus	7
43989.cce_4905	PF01007	Inward rectifier potassium channel	6
43989.cce_2503	PF13359	DDE superfamily endonuclease	10
43989.cce_2504	PF13613	Helix-turn-helix of DDE superfamily endonuclease	7
43989.cce_3305	PF05685	Putative restriction endonuclease	7
43989.cce_3964	PF02605	Photosystem I reaction centre subunit XI	9
43989.cce_3963	PF02605	Photosystem I reaction centre subunit XI	9
43989.cce_3962	PF00796	Photosystem I reaction centre subunit VIII	8
43989.cce_3562	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3561	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3566	PF05685	Putative restriction endonuclease	7
43989.cce_2214	PF00504	Chlorophyll A-B binding protein	7
43989.cce_2215	PF03055	Retinal pigment epithelial membrane protein	6
43989.cce_3362	PF08855	Domain of unknown function (DUF1825)	6
43989.cce_3101	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	5
43989.cce_2984	PF13449	Esterase-like activity of phytase	4
43989.cce_3102	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3299	PF10674	Protein of unknown function (DUF2488)	6
43989.cce_1526	PF06298	Photosystem II protein Y (PsbY)	6
43989.cce_3583	PF00504	Chlorophyll A-B binding protein	7
43989.cce_1290	PF02507	Photosystem I reaction centre subunit III	6
43989.cce_0454	PF11341	Protein of unknown function (DUF3143)	6
43989.cce_3633	PF13326	Photosystem II Pbs27	6
43989.cce_1859	PF12849	PBP superfamily domain	4
43989.cce_1187	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_1187	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_1672	PF08975	Domain of unknown function (DUF1868)	5
43989.cce_1677	PF10063	Uncharacterized integral membrane protein (DUF2301)	6
43989.cce_4001	PF06745	KaiC	4
43989.cce_4007	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_2404	PF05050	Methyltransferase FkbM domain	5
43989.cce_4223	PF02932	Neurotransmitter-gated ion-channel transmembrane region	18
43989.cce_4223	PF02931	Neurotransmitter-gated ion-channel ligand binding domain	9
43989.cce_4229	PF13358	DDE superfamily endonuclease	6
43989.cce_1076	PF05419	GUN4-like	5
43989.cce_0441	PF11264	Thylakoid formation protein	6
43989.cce_1272	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_4358	PF11965	Domain of unknown function (DUF3479)	6
43989.cce_5197	PF12849	PBP superfamily domain	4
43989.cce_2371	PF11210	Protein of unknown function (DUF2996)	6
43989.cce_5177	PF00224	Pyruvate kinase, barrel domain	4
43989.cce_2774	PF00924	Mechanosensitive ion channel	7
43989.cce_2515	PF03055	Retinal pigment epithelial membrane protein	6
43989.cce_2519	PF12263	Protein of unknown function (DUF3611)	7
43989.cce_3916	PF13246	Cation transport ATPase (P-type)	15
43989.cce_3916	PF00689	Cation transporting ATPase, C-terminus	7
43989.cce_3916	PF00690	Cation transporter/ATPase, N-terminus	7
43989.cce_2172	PF02392	Ycf4	6
43989.cce_2178	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_2204	PF00685	Sulfotransferase domain	5
43989.cce_2202	PF05685	Putative restriction endonuclease	7
43989.cce_3352	PF04422	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term	6
43989.cce_3352	PF04432	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus	5
43989.cce_0737	PF07444	Ycf66 protein N-terminus	6
43989.cce_0736	PF06596	Photosystem II reaction centre X protein (PsbX)	7
43989.cce_0932	PF13384	Homeodomain-like domain	13
43989.cce_0934	PF13358	DDE superfamily endonuclease	6
43989.cce_0028	PF05685	Putative restriction endonuclease	7
43989.cce_0025	PF05685	Putative restriction endonuclease	7
43989.cce_0362	PF04423	Rad50 zinc hook motif	8
43989.cce_0113	PF00773	RNB domain	6
43989.cce_0111	PF05685	Putative restriction endonuclease	7
43989.cce_0116	PF13301	Protein of unknown function (DUF4079)	8
43989.cce_3110	PF05277	Protein of unknown function (DUF726)	7
43989.cce_0209	PF00924	Mechanosensitive ion channel	7
43989.cce_4585	PF00924	Mechanosensitive ion channel	7
43989.cce_4580	PF01744	GLTT repeat (6 copies)	11
43989.cce_4581	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_4583	PF00060	Ligand-gated ion channel	8
43989.cce_4583	PF07885	Ion channel	4
43989.cce_1082	PF05685	Putative restriction endonuclease	7
43989.cce_1248	PF07885	Ion channel	4
43989.cce_4106	PF09990	Predicted membrane protein (DUF2231)	9
43989.cce_4107	PF09990	Predicted membrane protein (DUF2231)	9
43989.cce_4108	PF09990	Predicted membrane protein (DUF2231)	9
43989.cce_4366	PF05685	Putative restriction endonuclease	7
43989.cce_4698	PF09353	Domain of unknown function (DUF1995)	6
43989.cce_4694	PF05419	GUN4-like	5
43989.cce_5184	PF09364	XFP N-terminal domain	4
43989.cce_5184	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase	4
43989.cce_4210	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_4212	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_2694	PF11378	Protein of unknown function (DUF3181)	6
43989.cce_5161	PF13359	DDE superfamily endonuclease	10
43989.cce_3909	PF11152	Protein of unknown function (DUF2930)	6
43989.cce_3900	PF11267	Domain of unknown function (DUF3067)	6
43989.cce_4755	PF05685	Putative restriction endonuclease	7
43989.cce_3346	PF00773	RNB domain	6
43989.cce_3831	PF02656	Domain of unknown function (DUF202)	5
43989.cce_2520	PF04483	Protein of unknown function (DUF565)	4
43989.cce_3838	PF04983	RNA polymerase Rpb1, domain 3	4
43989.cce_3123	PF00685	Sulfotransferase domain	5
43989.cce_3122	PF01761	3-dehydroquinate synthase	5
43989.cce_0905	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_1500	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_1500	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_1504	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_0057	PF12576	Protein of unknown function (DUF3754)	7
43989.cce_3658	PF11317	Protein of unknown function (DUF3119)	6
43989.cce_0874	PF13301	Protein of unknown function (DUF4079)	8
43989.cce_1659	PF00490	Delta-aminolevulinic acid dehydratase	6
43989.cce_1652	PF01744	GLTT repeat (6 copies)	11
43989.cce_1896	PF05023	Phytochelatin synthase	6
43989.cce_4596	PF01926	50S ribosome-binding GTPase	4
43989.cce_1090	PF03522	Solute carrier family 12	8
43989.cce_1092	PF01679	Proteolipid membrane potential modulator	6
43989.cce_4119	PF02163	Peptidase family M50	4
43989.cce_4377	PF06485	Protein of unknown function (DUF1092)	7
43989.cce_4683	PF00924	Mechanosensitive ion channel	7
43989.cce_4680	PF01737	YCF9	6
43989.cce_4759	PF03098	Animal haem peroxidase	4
43989.cce_2753	PF05685	Putative restriction endonuclease	7
43989.cce_5084	PF13358	DDE superfamily endonuclease	6
43989.cce_5085	PF13592	Winged helix-turn helix	5
43989.cce_5085	PF13384	Homeodomain-like domain	13
43989.cce_4745	PF00145	C-5 cytosine-specific DNA methylase	5
43989.cce_2350	PF12617	Iron-Sulfur binding protein C terminal	6
43989.cce_2225	PF09364	XFP N-terminal domain	4
43989.cce_2225	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase	4
43989.cce_3336	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	5
43989.cce_2539	PF01007	Inward rectifier potassium channel	6
43989.cce_3804	PF13358	DDE superfamily endonuclease	6
43989.cce_3809	PF12204	Domain of unknown function (DUF3598)	8
43989.cce_3487	PF04983	RNA polymerase Rpb1, domain 3	4
43989.cce_3247	PF05685	Putative restriction endonuclease	7
43989.cce_0917	PF05685	Putative restriction endonuclease	7
43989.cce_0045	PF13358	DDE superfamily endonuclease	6
43989.cce_0047	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3793	PF13384	Homeodomain-like domain	13
43989.cce_3064	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_1404	PF05685	Putative restriction endonuclease	7
43989.cce_1405	PF05685	Putative restriction endonuclease	7
43989.cce_0463	PF03652	Holliday junction resolvase	4
43989.cce_3464	PF02325	YGGT family	5
43989.cce_0868	PF05685	Putative restriction endonuclease	7
43989.cce_0862	PF11833	Protein of unknown function (DUF3353)	6
43989.cce_0860	PF00737	Photosystem II 10 kDa phosphoprotein	6
43989.cce_0864	PF05685	Putative restriction endonuclease	7
43989.cce_0260	PF01926	50S ribosome-binding GTPase	4
43989.cce_0267	PF00124	Photosynthetic reaction centre protein	9
43989.cce_4307	PF03098	Animal haem peroxidase	4
43989.cce_1139	PF12849	PBP superfamily domain	4
43989.cce_1136	PF01926	50S ribosome-binding GTPase	4
43989.cce_5143	PF00058	Low-density lipoprotein receptor repeat class B	19
43989.cce_4411	PF05685	Putative restriction endonuclease	7
43989.cce_5095	PF05685	Putative restriction endonuclease	7
43989.cce_5094	PF12740	Chlorophyllase enzyme	6
43989.cce_2030	PF05685	Putative restriction endonuclease	7
43989.cce_4725	PF00685	Sulfotransferase domain	5
43989.cce_2320	PF05685	Putative restriction endonuclease	7
43989.cce_2321	PF05685	Putative restriction endonuclease	7
43989.cce_3329	PF12046	Protein of unknown function (DUF3529)	6
43989.cce_4381	PF00924	Mechanosensitive ion channel	7
43989.cce_3495	PF13449	Esterase-like activity of phytase	4
43989.cce_3494	PF13449	Esterase-like activity of phytase	4
43989.cce_3498	PF08527	Protein-arginine deiminase (PAD) middle domain	12
43989.cce_3498	PF03068	Protein-arginine deiminase (PAD)	6
43989.cce_3255	PF00690	Cation transporter/ATPase, N-terminus	7
43989.cce_3255	PF13246	Cation transport ATPase (P-type)	15
43989.cce_3255	PF00689	Cation transporting ATPase, C-terminus	7
43989.cce_0071	PF01926	50S ribosome-binding GTPase	4
43989.cce_0072	PF02325	YGGT family	5
43989.cce_3786	PF13613	Helix-turn-helix of DDE superfamily endonuclease	7
43989.cce_3785	PF13359	DDE superfamily endonuclease	10
43989.cce_3072	PF05685	Putative restriction endonuclease	7
43989.cce_3673	PF04278	Tic22-like family	12
43989.cce_3672	PF04278	Tic22-like family	12
43989.cce_3676	PF00924	Mechanosensitive ion channel	7
43989.cce_0783	PF00924	Mechanosensitive ion channel	7
43989.cce_3479	PF13592	Winged helix-turn helix	5
43989.cce_3479	PF13384	Homeodomain-like domain	13
43989.cce_0785	PF05685	Putative restriction endonuclease	7
43989.cce_3473	PF00145	C-5 cytosine-specific DNA methylase	5
43989.cce_0893	PF05151	Photosystem II reaction centre M protein (PsbM)	8
43989.cce_1305	PF00283	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits	6
43989.cce_1304	PF02419	PsbL protein	11
43989.cce_1307	PF00284	Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit	6
43989.cce_1307	PF00283	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits	6
43989.cce_0255	PF11623	Protein of unknown function (DUF3252)	6
43989.cce_0522	PF05050	Methyltransferase FkbM domain	5
43989.cce_0090	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3477	PF00124	Photosynthetic reaction centre protein	9
43989.cce_4574	PF00924	Mechanosensitive ion channel	7
43989.cce_1237	PF05419	GUN4-like	5
43989.cce_4833	PF07683	Cobalamin synthesis protein cobW C-terminal domain	6
43989.cce_4833	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_1120	PF13449	Esterase-like activity of phytase	4
43989.cce_5133	PF13359	DDE superfamily endonuclease	10
43989.cce_5134	PF13613	Helix-turn-helix of DDE superfamily endonuclease	7
43989.cce_4403	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_4799	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_2025	PF05685	Putative restriction endonuclease	7
43989.cce_2792	PF03912	Psb28 protein	8
43989.cce_2791	PF08041	PetM family of cytochrome b6f complex subunit 7	6
43989.cce_5045	PF12204	Domain of unknown function (DUF3598)	8
43989.cce_1303	PF01788	PsbJ	7
43989.cce_2334	PF03567	Sulfotransferase family	5
43989.cce_0629	PF02672	CP12 domain	5
43989.cce_0526	PF05050	Methyltransferase FkbM domain	5
43989.cce_3083	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_3863	PF13384	Homeodomain-like domain	13
43989.cce_3861	PF13358	DDE superfamily endonuclease	6
43989.cce_3865	PF13358	DDE superfamily endonuclease	6
43989.cce_0521	PF05050	Methyltransferase FkbM domain	5
43989.cce_3265	PF02529	Cytochrome B6-F complex subunit 5	8
43989.cce_4887	PF03982	Diacylglycerol acyltransferase	17
43989.cce_0067	PF00690	Cation transporter/ATPase, N-terminus	7
43989.cce_0067	PF00689	Cation transporting ATPase, C-terminus	7
43989.cce_0067	PF13246	Cation transport ATPase (P-type)	15
43989.cce_0660	PF00124	Photosynthetic reaction centre protein	9
43989.cce_1425	PF05685	Putative restriction endonuclease	7
43989.cce_0403	PF00924	Mechanosensitive ion channel	7
43989.cce_3689	PF14249	Tocopherol cyclase	4
43989.cce_3447	PF05685	Putative restriction endonuclease	7
43989.cce_0887	PF12849	PBP superfamily domain	4
43989.cce_0886	PF12849	PBP superfamily domain	4
43989.cce_1330	PF04481	Protein of unknown function (DUF561)	6
43989.cce_0247	PF00924	Mechanosensitive ion channel	7
43989.cce_0088	PF11371	Protein of unknown function (DUF3172)	6
43989.cce_4548	PF05421	Protein of unknown function (DUF751)	6
43989.cce_1753	PF04839	Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)	6
43989.cce_5116	PF13359	DDE superfamily endonuclease	10
43989.cce_1236	PF05685	Putative restriction endonuclease	7
43989.cce_2013	PF06485	Protein of unknown function (DUF1092)	7
43989.cce_3157	PF00773	RNB domain	6
43989.cce_3154	PF02941	Ferredoxin thioredoxin reductase variable alpha chain	7
43989.cce_3302	PF05685	Putative restriction endonuclease	7
43989.cce_3307	PF13359	DDE superfamily endonuclease	10
43989.cce_3308	PF13613	Helix-turn-helix of DDE superfamily endonuclease	7
43989.cce_3877	PF00924	Mechanosensitive ion channel	7
43989.cce_3279	PF13359	DDE superfamily endonuclease	10
43989.cce_3278	PF13613	Helix-turn-helix of DDE superfamily endonuclease	7
43989.cce_3272	PF00805	Pentapeptide repeats (8 copies)	7
43989.cce_0650	PF02325	YGGT family	5
43989.cce_1925	PF01926	50S ribosome-binding GTPase	4
43989.cce_1924	PF01926	50S ribosome-binding GTPase	4
43989.cce_1927	PF11998	Protein of unknown function (DUF3493)	7
43989.cce_0436	PF03647	Transmembrane proteins 14C	8
43989.cce_0430	PF05542	Protein of unknown function (DUF760)	7
43989.cce_3694	PF09366	Protein of unknown function (DUF1997)	6
43989.cce_3450	PF05685	Putative restriction endonuclease	7
43989.cce_2903	PF02492	CobW/HypB/UreG, nucleotide-binding domain	5
43989.cce_1328	PF01926	50S ribosome-binding GTPase	4
43989.cce_1327	PF05685	Putative restriction endonuclease	7
43989.cce_1219	PF07927	HicA toxin of bacterial toxin-antitoxin,	9
43989.cce_1216	PF05685	Putative restriction endonuclease	7
43989.cce_1742	PF05685	Putative restriction endonuclease	7
43989.cce_1697	PF13358	DDE superfamily endonuclease	6
43989.cce_1696	PF13592	Winged helix-turn helix	5
43989.cce_1696	PF13384	Homeodomain-like domain	13
43989.cce_1213	PF00145	C-5 cytosine-specific DNA methylase	5
43989.cce_1106	PF11282	Protein of unknown function (DUF3082)	6
43989.cce_1101	PF13359	DDE superfamily endonuclease	10
43989.cce_1109	PF05685	Putative restriction endonuclease	7
43989.cce_4556	PF03567	Sulfotransferase family	5
43989.cce_4550	PF03567	Sulfotransferase family	5
43989.cce_4429	PF03567	Sulfotransferase family	5
43989.cce_1819	PF00924	Mechanosensitive ion channel	7
43989.cce_5202	PF00690	Cation transporter/ATPase, N-terminus	7
43989.cce_5202	PF13246	Cation transport ATPase (P-type)	15
43989.cce_5202	PF00689	Cation transporting ATPase, C-terminus	7
43989.cce_5204	PF00690	Cation transporter/ATPase, N-terminus	7
43989.cce_5204	PF00689	Cation transporting ATPase, C-terminus	7
43989.cce_4330	PF10664	Cyanobacterial and plastid NDH-1 subunit M	6
43989.cce_4335	PF13358	DDE superfamily endonuclease	6
43989.cce_4334	PF13592	Winged helix-turn helix	5
43989.cce_5061	PF00773	RNB domain	6
43989.cce_5063	PF00773	RNB domain	6
43989.cce_2485	PF00124	Photosynthetic reaction centre protein	9
43989.cce_5117	PF13613	Helix-turn-helix of DDE superfamily endonuclease	7
43989.cce_2648	PF00305	Lipoxygenase	10
43989.cce_3993	PF00145	C-5 cytosine-specific DNA methylase	5
43989.cce_2469	PF05685	Putative restriction endonuclease	7
43989.cce_2460	PF13613	Helix-turn-helix of DDE superfamily endonuclease	7
43989.cce_3844	PF02656	Domain of unknown function (DUF202)	5
43989.cce_3845	PF02656	Domain of unknown function (DUF202)	5
43989.cce_3846	PF02656	Domain of unknown function (DUF202)	5
43989.cce_3843	PF02656	Domain of unknown function (DUF202)	5
43989.cce_2262	PF13384	Homeodomain-like domain	13
43989.cce_2260	PF13358	DDE superfamily endonuclease	6
43989.cce_2267	PF02163	Peptidase family M50	4
43989.cce_2265	PF11360	Protein of unknown function (DUF3110)	6