Metamenu

Effective results for Eubacterium limosum KIST612 (eggnog40)

Summary

Number of putative secreted proteins: 324
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 59 eukaryotic-like domains, contained in 324 proteins (82 high, 242 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
903814.ELI_3641PF02607 (PF00809) (PF02310)(mitochondrial)
903814.ELI_1943(PF02782) (PF00370)(mitochondrial)
903814.ELI_3691(PF02028)ER
903814.ELI_0339(PF01554)ER
903814.ELI_1466(PF00689) (PF00690) (PF00122)
903814.ELI_4102PF05738ER
903814.ELI_3688(PF02028)ER
903814.ELI_1825PF05738ER
903814.ELI_2791(PF02028)ER
903814.ELI_2139(PF01894)(mitochondrial)
903814.ELI_2416(PF01813)mitochondrial
903814.ELI_0476(PF01554)ER
903814.ELI_2782(PF06445)mitochondrial
903814.ELI_1243PF00112ER
903814.ELI_0267PF05738ER
903814.ELI_1241PF00112ER
903814.ELI_4547(PF02028)ER
903814.ELI_2339(PF12724) (PF13187)(mitochondrial)
903814.ELI_3086(PF02782) (PF00370)(mitochondrial)
903814.ELI_1015(PF06541)ER
903814.ELI_4546(PF02028)ER
903814.ELI_1463(PF00689) (PF00690) (PF00122)
903814.ELI_0510(PF02275)ER
903814.ELI_4219(PF02310)(ER)
903814.ELI_3350(PF01554)(ER); ER
903814.ELI_0185PF05738ER
903814.ELI_4224(PF00689) (PF00690) (PF00122)
903814.ELI_2766(PF01554)(ER)
903814.ELI_0533PF05738(mitochondrial)
903814.ELI_0535PF05738ER
903814.ELI_0404(PF01477)ER; (ER)
903814.ELI_4181(PF00689) (PF00690) (PF00122)
903814.ELI_4236PF05738ER
903814.ELI_4232(PF02028)ER
903814.ELI_4233(PF02028)ER
903814.ELI_0712(PF00939)ER
903814.ELI_2710(PF02028)ER
903814.ELI_2486(PF02028)ER
903814.ELI_2363(PF06445)mitochondrial
903814.ELI_4244PF00112ER
903814.ELI_2638(PF13187)ER
903814.ELI_2952(PF10662)mitochondrial
903814.ELI_3159(PF00939)ER
903814.ELI_2546(PF01554)ER; (ER)
903814.ELI_3017(PF06445)mitochondrial
903814.ELI_0616PF05738ER
903814.ELI_1624(PF00689) (PF00690) (PF00122)
903814.ELI_1884PF05738ER
903814.ELI_0110(PF00939)(mitochondrial); mitochondrial
903814.ELI_0314(PF00939)ER
903814.ELI_1974(PF04422) (PF13187) (PF04432)
903814.ELI_4090(PF02028)ER; (ER)
903814.ELI_3008(PF06445)mitochondrial
903814.ELI_2192(PF01813)mitochondrial
903814.ELI_0103(PF00939)(ER)
903814.ELI_0108(PF00939)(ER)
903814.ELI_0297(PF00939)(ER)
903814.ELI_4280(PF00939)ER
903814.ELI_2981(PF00689) (PF00690) (PF00122)
903814.ELI_1443(PF01554)(ER)
903814.ELI_0352(PF06445)mitochondrial
903814.ELI_4298(PF00121)(mitochondrial)
903814.ELI_1690(PF02310)(mitochondrial)
903814.ELI_0904(PF10662)(mitochondrial)
903814.ELI_1234PF00112(mitochondrial)
903814.ELI_3998(PF02782) (PF00370)
903814.ELI_1837(PF02782) (PF00370)
903814.ELI_1832(PF02782) (PF00370)
903814.ELI_3273PF00112(ER)
903814.ELI_1755(PF01257) (PF13237)
903814.ELI_0484PF02607 (PF02310)
903814.ELI_3682PF02607 (PF02310)
903814.ELI_2315(PF02782) (PF00370)
903814.ELI_2313(PF02782) (PF00370)
903814.ELI_4130(PF13148)(mitochondrial)
903814.ELI_3672PF02607 (PF02310)
903814.ELI_0479PF02607 (PF02310)
903814.ELI_0317(PF00766) (PF01012)
903814.ELI_0868(PF00766) (PF01012)
903814.ELI_0865(PF00766) (PF01012)
903814.ELI_0045(PF02782) (PF00370)
903814.ELI_2758(PF00122)(mitochondrial)
903814.ELI_2928(PF17042) (PF07005)
903814.ELI_2929PF02607 (PF02310)
903814.ELI_0048(PF02782) (PF00370)
903814.ELI_3422(PF02782) (PF00370)
903814.ELI_2004PF02607 (PF02310)
903814.ELI_0859(PF02782) (PF00370)
903814.ELI_0432(PF02782) (PF00370)
903814.ELI_0433(PF01116)(mitochondrial)
903814.ELI_1592(PF02782) (PF00370)
903814.ELI_1593PF02607 (PF02310)
903814.ELI_1594(PF02782) (PF00370)
903814.ELI_1065PF02607 (PF02310)
903814.ELI_4503(PF02782) (PF00370)
903814.ELI_1847(PF02782) (PF00370)
903814.ELI_4166PF02607 (PF02310)
903814.ELI_4168PF02607 (PF02310)
903814.ELI_4345PF02607 (PF02310)
903814.ELI_2029(PF17042) (PF07005)
903814.ELI_0528(PF02782) (PF00370)
903814.ELI_0526(PF02782) (PF00370)
903814.ELI_0097PF02607 (PF02310)
903814.ELI_2034(PF01871)(ER)
903814.ELI_1423(PF02782) (PF00370)
903814.ELI_2143(PF02782) (PF00370)
903814.ELI_3028(PF02782) (PF00370)
903814.ELI_1952(PF00766) (PF01012)
903814.ELI_0542(PF00766) (PF01012)
903814.ELI_0381(PF01554)(ER)
903814.ELI_4089(PF00122)(ER)
903814.ELI_2833PF02607 (PF02310)
903814.ELI_2052(PF13187)(mitochondrial)
903814.ELI_1578(PF17042) (PF07005)
903814.ELI_3712PF02607 (PF02310)
903814.ELI_3714PF02607 (PF02310)
903814.ELI_4095PF02607 (PF02310)
903814.ELI_2261(PF00690) (PF00122)
903814.ELI_1365(PF02782) (PF00370)
903814.ELI_0561PF02607 (PF02310)
903814.ELI_0101(PF02028)(ER)
903814.ELI_3922(PF02782) (PF00370)
903814.ELI_0583(PF02782) (PF00370)
903814.ELI_2185(PF01496)(mitochondrial)
903814.ELI_1516(PF17042) (PF07005)
903814.ELI_0919PF02607 (PF02310)
903814.ELI_0820(PF02782) (PF00370)
903814.ELI_1998PF02607 (PF02310)
903814.ELI_3846(PF04422) (PF04432)
903814.ELI_2469(PF00121)(mitochondrial)
903814.ELI_2866(PF02782) (PF00370)
903814.ELI_2868(PF02782) (PF00370)
903814.ELI_3050(PF06541)
903814.ELI_3054(PF13474)
903814.ELI_0012(PF00834)
903814.ELI_1830(PF01791)
903814.ELI_2470(PF01116)
903814.ELI_3308(PF01257)
903814.ELI_2259(PF00689)
903814.ELI_1754(PF01257)
903814.ELI_1758(PF12724)
903814.ELI_0331(PF13187)
903814.ELI_0805PF01208
903814.ELI_4104(PF13148)
903814.ELI_0487(PF00809)
903814.ELI_3684(PF01210)
903814.ELI_3467PF01208
903814.ELI_2316(PF04324)
903814.ELI_1322(PF02275)
903814.ELI_0074(PF02028)
903814.ELI_1810(PF04765)
903814.ELI_4480(PF00122)
903814.ELI_2418(PF16886)
903814.ELI_2419(PF01991)
903814.ELI_3415(PF13474)
903814.ELI_2305(PF01894)
903814.ELI_2306(PF01894)
903814.ELI_3090PF07892
903814.ELI_1024PF01208
903814.ELI_1021PF01208
903814.ELI_0315(PF01554)
903814.ELI_4286PF01208
903814.ELI_0862PF07892
903814.ELI_0860(PF04324)
903814.ELI_0867(PF01012)
903814.ELI_0864(PF01012)
903814.ELI_0049PF07892
903814.ELI_4549(PF01554)
903814.ELI_3663PF01208
903814.ELI_3669(PF02028)
903814.ELI_0312PF01208
903814.ELI_2420(PF01990)
903814.ELI_2422(PF01496)
903814.ELI_4300(PF06445)
903814.ELI_3088(PF04324)
903814.ELI_3338(PF01554)
903814.ELI_1651(PF01012)
903814.ELI_1276PF01807
903814.ELI_0052(PF01791)
903814.ELI_0051(PF04324)
903814.ELI_1874(PF00834)
903814.ELI_4379(PF00122)
903814.ELI_0452(PF01969)
903814.ELI_0451(PF00731)
903814.ELI_4208(PF09370)
903814.ELI_3505PF01208
903814.ELI_4392(PF01871)
903814.ELI_0044(PF01791)
903814.ELI_1642(PF13148)
903814.ELI_4495(PF06445)
903814.ELI_0845(PF01257)
903814.ELI_0846(PF01257)
903814.ELI_0840(PF13237)
903814.ELI_0843(PF01257)
903814.ELI_0517(PF01554)
903814.ELI_2423(PF01992)
903814.ELI_2930PF01208
903814.ELI_3423(PF01210)
903814.ELI_4368(PF01554)
903814.ELI_4215(PF01964)
903814.ELI_4216(PF01964)
903814.ELI_4210(PF09370)
903814.ELI_3355(PF01964)
903814.ELI_2006(PF13474)
903814.ELI_2005(PF00809)
903814.ELI_2002PF02607
903814.ELI_1454(PF01969)
903814.ELI_1457(PF01969)
903814.ELI_1456(PF00731)
903814.ELI_1077(PF01791)
903814.ELI_0217PF01807
903814.ELI_1856(PF02275)
903814.ELI_3180(PF00847)
903814.ELI_2839PF01208
903814.ELI_4220(PF02310)
903814.ELI_3368(PF00809)
903814.ELI_3167(PF12724)
903814.ELI_3161PF01208
903814.ELI_1445(PF13237)
903814.ELI_1591PF01208
903814.ELI_1595(PF04324)
903814.ELI_1597PF07892
903814.ELI_0883PF01208
903814.ELI_0885PF01208
903814.ELI_4500(PF01894)
903814.ELI_4501(PF01116)
903814.ELI_4502(PF00834)
903814.ELI_3997(PF01116)not used
903814.ELI_1842(PF04324)
903814.ELI_1844PF07892
903814.ELI_4349PF05738
903814.ELI_3754(PF06445)
903814.ELI_4187PF01208
903814.ELI_4183PF01208
903814.ELI_3579(PF07247)
903814.ELI_0713PF01208
903814.ELI_3370(PF01116)
903814.ELI_2483(PF00122)
903814.ELI_2485PF01208
903814.ELI_2489PF01208
903814.ELI_0663(PF00121)
903814.ELI_2025PF01208
903814.ELI_1127(PF00958)
903814.ELI_3967PF01807
903814.ELI_3966(PF13148)
903814.ELI_4408PF01208
903814.ELI_1942(PF01791)
903814.ELI_3818(PF01554)
903814.ELI_4243(PF00958)
903814.ELI_2494(PF02782)
903814.ELI_2495(PF00370)
903814.ELI_2632(PF13237)
903814.ELI_1420(PF01210)
903814.ELI_1734(PF13187)
903814.ELI_1136(PF13237)
903814.ELI_1133(PF00122)
903814.ELI_3604(PF00809)
903814.ELI_3777(PF12640)
903814.ELI_1951(PF01012)
903814.ELI_4256(PF13474)
903814.ELI_2041PF01208
903814.ELI_2047PF01807
903814.ELI_1560(PF00122)
903814.ELI_1143PF01807
903814.ELI_4640PF01807
903814.ELI_0541(PF01012)
903814.ELI_4393(PF00882)
903814.ELI_3708(PF13474)
903814.ELI_4468PF01208
903814.ELI_0764(PF01116)
903814.ELI_2729(PF01554)
903814.ELI_4657(PF00847)
903814.ELI_1887PF05738
903814.ELI_1882PF06888
903814.ELI_0371(PF00809)
903814.ELI_4471(PF06541)
903814.ELI_2537(PF01257)
903814.ELI_3713(PF00809)
903814.ELI_4274(PF04324)
903814.ELI_0285(PF02310)
903814.ELI_4276PF01208
903814.ELI_0316(PF01012)
903814.ELI_0022(PF04324)
903814.ELI_0021PF07892
903814.ELI_2190(PF16886)
903814.ELI_1362(PF13187)
903814.ELI_0493(PF00122)
903814.ELI_0560(PF00809)
903814.ELI_1213(PF01257)
903814.ELI_0292(PF00731)
903814.ELI_0295PF01208
903814.ELI_0298PF01208
903814.ELI_3929(PF01116)
903814.ELI_3923(PF01791)
903814.ELI_3926(PF01791)
903814.ELI_3924(PF01791)
903814.ELI_4283PF01208
903814.ELI_3031PF07892
903814.ELI_3033(PF04324)
903814.ELI_0744(PF00882)
903814.ELI_0581(PF01791)
903814.ELI_4441PF01208
903814.ELI_2298(PF13187)not used
903814.ELI_2452(PF00122)
903814.ELI_0639(PF01894)
903814.ELI_2188(PF01992)
903814.ELI_2189(PF01990)
903814.ELI_2187(PF01991)
903814.ELI_0787PF01208
903814.ELI_1370(PF06777)
903814.ELI_1778PF01208
903814.ELI_1773(PF01554)
903814.ELI_0915(PF00122)
903814.ELI_1170(PF13474)
903814.ELI_1198(PF00731)
903814.ELI_4452(PF01554)
903814.ELI_2468(PF01894)
903814.ELI_2864(PF04324)
903814.ELI_2861(PF01116)
903814.ELI_2862PF07892
903814.ELI_2643(PF13237)
903814.ELI_2240(PF12724)
903814.ELI_1745(PF01554)
903814.ELI_1520(PF00766)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================