Metamenu

Genomes encoding eukaryotic-like proteins

PF01208 Uroporphyrinogen decarboxylase (URO-D)

Copy number in non-pathogens:
Mean=1.06 Stddev=1.73

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Clostridium sp. SY8519 s 6 12
Faecalicatena contorta s 16 30
[Clostridium] citroniae WAL-19142 s 4 8
Didymococcus colitermitum TAV2 s 5 10
Desulfitobacterium hafniense DP7 s 6 12
Clostridium sp. KLE 1755 s 5 11
Blautia producta ATCC 27340 = DSM 2950 s 13 25
Parabacteroides gordonii DSM 23371 s 4 8
Sporomusa ovata DSM 2662 s 6 13
Ruminococcus gauvreauii DSM 19829 s 26 47
Blautia producta ATCC 27340 = DSM 2950 s 13 25
Clostridium sp. D5 s 29 53
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 10 19
Subdoligranulum sp. 4_3_54A2FAA s 5 10
[Clostridium] citroniae WAL-17108 s 5 10
Dorea formicigenerans 4_6_53AFAA s 4 9
Sporomusa ovata DSM 2662 s 6 13
Caldicoprobacter oshimai DSM 21659 s 5 11
Clostridium ljungdahlii DSM 13528 s 10 20
Treponema primitia ZAS-2 s 8 16
Treponema azotonutricium ZAS-9 s 15 28
Lactonifactor longoviformis DSM 17459 s 18 33
Sporobacter termitidis DSM 10068 s 20 37
Blautia schinkii DSM 10518 s 8 15
Eubacterium limosum s 19 35
Ruthenibacterium lactatiformans s 5 11
Parabacteroides gordonii MS-1 s 4 8
Clostridium ljungdahlii DSM 13528 s 9 18
Eubacterium limosum s 13 25
Moorella thermoacetica s 5 10
Moorella thermoacetica s 5 10
Oxobacter pfennigii s 34 61
Ruthenibacterium lactatiformans s 6 12
Opitutaceae bacterium TSB47 s 13 24
Eubacterium limosum s 14 27
Blautia sp. YL58 s 7 14
Moorella thermoacetica s 6 13
Moorella thermoacetica s 5 10
Moorella thermoacetica s 5 10
Moorella thermoacetica s 4 8
Moorella thermoacetica s 5 10
Eisenbergiella tayi s 7 14
Eisenbergiella tayi s 9 18
Eisenbergiella tayi s 9 18
Eisenbergiella tayi s 9 17
Eisenbergiella tayi s 8 16
Eisenbergiella tayi s 9 18
Eisenbergiella tayi s 9 18
Eisenbergiella tayi s 7 14

*p=pathogen;s=symbiont