Metamenu

Effective results for Prevotella disiens FB035-09AN (eggnog40)

Summary

Number of putative secreted proteins: 166
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 25 eukaryotic-like domains, contained in 166 proteins (38 high, 128 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
866771.HMPREF9296_0395(PF05598) (PF01609)ER
866771.HMPREF9296_1355PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_0080(PF03051)ER
866771.HMPREF9296_0772PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_1219PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_0165(PF05598)(mitochondrial)
866771.HMPREF9296_2572(PF03051)ER
866771.HMPREF9296_1959PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_1958(PF05598)(mitochondrial)
866771.HMPREF9296_0138(PF13290)(mitochondrial)
866771.HMPREF9296_2363PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_2362(PF13306)(ER)
866771.HMPREF9296_0126(PF05598)(mitochondrial)
866771.HMPREF9296_0678(PF13306)ER
866771.HMPREF9296_0582PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_2227PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_1425(PF13306)ER
866771.HMPREF9296_0809(PF13306)ER
866771.HMPREF9296_2507(PF08797)ER
866771.HMPREF9296_2233(PF13306)ER
866771.HMPREF9296_1296(PF13306)ER
866771.HMPREF9296_1293(PF00665)mitochondrial; (mitochondrial)
866771.HMPREF9296_2409(PF13306)ER
866771.HMPREF9296_1842PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_0533PF13155(mitochondrial); mitochondrial
866771.HMPREF9296_2386PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_2259(PF13306)ER
866771.HMPREF9296_1650(PF03577)ER
866771.HMPREF9296_1129(PF03432)(mitochondrial)
866771.HMPREF9296_2609(PF13290)ER
866771.HMPREF9296_2605(PF01715)(ER)
866771.HMPREF9296_0357(PF03051)ER
866771.HMPREF9296_1253PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_1037(PF01609)ER
866771.HMPREF9296_0509PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_1246PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_2459(PF03577)ER
866771.HMPREF9296_1347PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_0960(PF03051)ER
866771.HMPREF9296_1820PF13936 (PF00665)(mitochondrial)
866771.HMPREF9296_0318PF13936(mitochondrial)
866771.HMPREF9296_1686(PF05970) (PF02689)
866771.HMPREF9296_2322PF01807 PF13155
866771.HMPREF9296_0164PF13936(mitochondrial)
866771.HMPREF9296_2317PF13936 (PF00665)
866771.HMPREF9296_1941(PF01609)(ER)
866771.HMPREF9296_2305(PF01609)(ER)
866771.HMPREF9296_1413(PF01609)(ER)
866771.HMPREF9296_1302PF01807 PF13155
866771.HMPREF9296_1529PF13936 (PF00665)
866771.HMPREF9296_1408(PF01609)(ER)
866771.HMPREF9296_1087(PF01609)plastid
866771.HMPREF9296_0662PF13936 (PF00665)
866771.HMPREF9296_1056(PF05598) (PF01609)
866771.HMPREF9296_0055(PF01609)(ER)
866771.HMPREF9296_0876(PF01609)(ER)
866771.HMPREF9296_0583PF13936 (PF00665)
866771.HMPREF9296_1131PF01807 PF13155
866771.HMPREF9296_0641PF01807 PF13155
866771.HMPREF9296_0106PF13936(mitochondrial)
866771.HMPREF9296_2534PF01807 PF13155
866771.HMPREF9296_1066PF13936(mitochondrial)
866771.HMPREF9296_0715(PF01609)(ER)
866771.HMPREF9296_1332(PF01609)(ER)
866771.HMPREF9296_1411PF13936(mitochondrial)
866771.HMPREF9296_0282PF13155(plastid)
866771.HMPREF9296_1813(PF01609)(ER)
866771.HMPREF9296_0501PF13936 (PF00665)
866771.HMPREF9296_1112PF13936 (PF00665)
866771.HMPREF9296_0370(PF01609)(ER)
866771.HMPREF9296_2584(PF01609)(ER)
866771.HMPREF9296_2636PF13936 (PF00665)
866771.HMPREF9296_1907(PF07837) (PF02971)
866771.HMPREF9296_0747PF01807 PF13155
866771.HMPREF9296_1222(PF09825)
866771.HMPREF9296_0220(PF01609)
866771.HMPREF9296_0842(PF03432)
866771.HMPREF9296_2325(PF03432)
866771.HMPREF9296_1368(PF05598)
866771.HMPREF9296_1214(PF13481)
866771.HMPREF9296_0897(PF01609)
866771.HMPREF9296_0898(PF01609)
866771.HMPREF9296_0163(PF03050)
866771.HMPREF9296_1545(PF00665)
866771.HMPREF9296_0947(PF01609)not used
866771.HMPREF9296_0945(PF01609)
866771.HMPREF9296_0545(PF05598)
866771.HMPREF9296_1209(PF01609)
866771.HMPREF9296_1203(PF01609)
866771.HMPREF9296_1205(PF13306)
866771.HMPREF9296_2179(PF05970)
866771.HMPREF9296_1684(PF01715)
866771.HMPREF9296_1335(PF01609)
866771.HMPREF9296_0222(PF01609)
866771.HMPREF9296_2306(PF01609)
866771.HMPREF9296_1410(PF00665)not used
866771.HMPREF9296_1985(PF05598)
866771.HMPREF9296_0329(PF00665)
866771.HMPREF9296_2544PF16269
866771.HMPREF9296_0058(PF03050)
866771.HMPREF9296_1956(PF13481)
866771.HMPREF9296_2379(PF00665)
866771.HMPREF9296_1880(PF03050)
866771.HMPREF9296_0865(PF01131)
866771.HMPREF9296_0866(PF01131)
866771.HMPREF9296_0660(PF01609)
866771.HMPREF9296_0668(PF01131)
866771.HMPREF9296_0874(PF13481)
866771.HMPREF9296_2180(PF00665)
866771.HMPREF9296_1326(PF05598)
866771.HMPREF9296_0056(PF01609)
866771.HMPREF9296_0278(PF03432)
866771.HMPREF9296_1604(PF03630)
866771.HMPREF9296_0805(PF00665)
866771.HMPREF9296_0320(PF00665)
866771.HMPREF9296_2142(PF05693)
866771.HMPREF9296_1299(PF03432)
866771.HMPREF9296_2654(PF03050)
866771.HMPREF9296_0076(PF03050)
866771.HMPREF9296_0074(PF00665)
866771.HMPREF9296_1848(PF05598)
866771.HMPREF9296_1067(PF00665)not used
866771.HMPREF9296_1065(PF00665)
866771.HMPREF9296_0717(PF13306)
866771.HMPREF9296_0825PF13155
866771.HMPREF9296_0629(PF01609)
866771.HMPREF9296_0536(PF03432)
866771.HMPREF9296_0532PF01807
866771.HMPREF9296_2414(PF05598)
866771.HMPREF9296_2093(PF13481)
866771.HMPREF9296_2679(PF03432)
866771.HMPREF9296_1014(PF03432)
866771.HMPREF9296_1471(PF00665)
866771.HMPREF9296_0631(PF03050)not used
866771.HMPREF9296_0633(PF03050)
866771.HMPREF9296_2462(PF08797)
866771.HMPREF9296_2269(PF05598)
866771.HMPREF9296_2267(PF00665)
866771.HMPREF9296_2286(PF01609)
866771.HMPREF9296_2288(PF03577)
866771.HMPREF9296_1396(PF01609)
866771.HMPREF9296_2112(PF01131)
866771.HMPREF9296_1480(PF00665)
866771.HMPREF9296_0025(PF13481)
866771.HMPREF9296_1258(PF01131)
866771.HMPREF9296_1254(PF05598)
866771.HMPREF9296_2613(PF16314)
866771.HMPREF9296_1035(PF01609)
866771.HMPREF9296_0033(PF03050)
866771.HMPREF9296_0729(PF03050)
866771.HMPREF9296_0294(PF03050)
866771.HMPREF9296_0508(PF05598)
866771.HMPREF9296_2440(PF05598)
866771.HMPREF9296_2594(PF05598)
866771.HMPREF9296_1933(PF03050)not used
866771.HMPREF9296_1932(PF03050)
866771.HMPREF9296_2139(PF03050)
866771.HMPREF9296_1248(PF03050)
866771.HMPREF9296_1111(PF03050)
866771.HMPREF9296_0372PF13936
866771.HMPREF9296_2454(PF03050)
866771.HMPREF9296_1237(PF01609)
866771.HMPREF9296_1167(PF13290)
866771.HMPREF9296_1583(PF01131)
866771.HMPREF9296_1769(PF05598)
866771.HMPREF9296_0567(PF13306)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================