Metamenu

Genomes encoding eukaryotic-like proteins

PF00665 Integrase core domain

Copy number in non-pathogens:
Mean=2.61 Stddev=3.52

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Escherichia coli O104:H4 str. 2011C-3493 s 4 17
Paraburkholderia mimosarum LMG 23256 = NBRC 106338 s 5 22
Lactobacillus paracasei subsp. paracasei JCM 8130 s 5 21
Lactobacillus fermentum IFO 3956 s 8 34
Lactobacillus casei subsp. casei ATCC 393 s 8 32
Oscillibacter valericigenes Sjm18-20 s 9 36
Xanthomonas fragariae s 4 19
Clavibacter michiganensis subsp. sepedonicus s 12 45
Shigella sonnei 53G s 11 43
Lactobacillus reuteri ATCC 53608 s 10 40
Bordetella pertussis 18323 s 11 44
Gluconacetobacter diazotrophicus PA1 5 s 5 22
Serratia symbiotica SCt-VLC s 8 33
Bordetella pertussis s 15 57
Collinsella ihuae s 4 18
Mycobacterium chimaera s 5 23
Mucispirillum schaedleri ASF457 s 4 19
Lactobacillus reuteri SD2112 s 8 31
Gordonia bronchialis DSM 43247 s 4 17
Neisseria mucosa ATCC 25996 s 4 20
Shigella flexneri CCH060 s 19 73
Shigella sonnei 4822-66 s 12 48
Shigella sonnei str. Moseley s 10 39
Shigella sonnei 3233-85 s 9 36
Escherichia coli DEC2C s 4 17
Escherichia coli DEC2E s 4 18
Shigella dysenteriae 225-75 s 12 45
Shigella boydii 4444-74 s 11 43
Shigella flexneri 2a str. 2457T s 17 65
Shigella boydii 5216-82 s 14 55
Shigella flexneri VA-6 s 13 49
Shigella flexneri 4343-70 s 13 51
Escherichia coli KTE20 s 4 17
Escherichia coli HVH 4 (4-7276109) s 4 20
Treponema phagedenis 4A s 8 31
Lactobacillus fermentum Lf1 s 7 30
Bordetella holmesii ATCC 51541 s 4 20
Bordetella holmesii 30539 s 6 24
Bordetella holmesii 35009 s 5 22
Bordetella holmesii 41130 s 4 20
Bordetella holmesii 44057 s 4 19
Bordetella holmesii 1058 s 5 23
Bradyrhizobium elkanii USDA 76 s 4 17
Microvirga lotononidis s 4 18
Mucispirillum schaedleri ASF457 s 4 19
Lactobacillus fermentum 3872 s 11 43
Piscirickettsia salmonis AUSTRAL-005 s 19 71
Yersinia pestis biovar Orientalis str. F1991016 s 5 21
Yersinia pestis biovar Antiqua str. UG05-0454 s 4 19
Escherichia coli B7A s 5 21
Shigella dysenteriae 1012 s 15 57
Escherichia coli TW11681 s 4 19
Rhodobacteraceae bacterium KLH11 s 4 17
Escherichia coli 97.0246 s 7 30
Lactobacillus crispatus FB077-07 s 4 18
Massilia timonae CCUG 45783 s 6 27
Shigella flexneri 5a str. M90T s 12 48
Bordetella pertussis CHLA-11 s 22 81
Bordetella pertussis B1917 s 15 58
Lactobacillus coryniformis subsp. coryniformis CECT 5711 s 5 22
Shigella boydii ATCC 9905 s 6 26
Shigella dysenteriae CDC 74-1112 s 10 41
Lactobacillus brevis AG48 s 5 22
Paenibacillus larvae subsp. larvae DSM 25719 s 4 17
Burkholderia cenocepacia MC0-3 s 4 17
Paraburkholderia xenovorans LB400 s 4 20
Xanthomonas oryzae pv. oryzae PXO99A s 4 19
Lactobacillus reuteri I5007 s 11 44
Shigella flexneri 2002017 s 19 72
Burkholderia glumae BGR1 s 6 24
Shigella boydii Sb227 s 12 48
Shigella sonnei Ss046 s 12 48
Shigella flexneri 5 str. 8401 s 12 47
Bordetella pertussis CS s 13 49
Shigella boydii CDC 3083-94 s 10 39
Shigella flexneri 2a str. 2457T s 13 50
Lactobacillus fermentum CECT 5716 s 7 28
Bordetella pertussis H934 s 7 29
Shigella sonnei s 10 39
Shigella flexneri s 14 55
Leptospira interrogans s 4 18
Bordetella holmesii F627 s 5 21
Bordetella holmesii H558 s 5 23
Shigella flexneri 2003036 s 6 25
Shigella flexneri Shi06HN006 s 8 34
Piscirickettsia salmonis s 18 67
Burkholderia glumae LMG 2196 = ATCC 33617 s 4 17
Piscirickettsia salmonis s 6 24
Bordetella pertussis s 16 60
Yersinia pestis Antiqua s 6 27
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 14 55
Bordetella pertussis s 15 57
Bordetella pertussis s 14 55
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 14 54
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 14 55
Bordetella pertussis s 15 58
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 14 52
Bordetella pertussis s 15 58
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 16 59
Bordetella pertussis s 15 58
Bordetella pertussis s 16 59
Bordetella pertussis s 16 59
Bordetella pertussis s 15 57
Yersinia pestis s 5 21
Spiroplasma kunkelii CR2-3x s 4 17
Shigella boydii 08-0009 s 14 55
Bordetella pertussis s 15 56
Lactobacillus plantarum s 5 23
Burkholderia ubonensis s 4 17
Lactobacillus fermentum s 4 17
Lactobacillus fermentum s 7 30
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 14 55
Bordetella pertussis s 15 56
Bordetella pertussis s 15 58
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 14 54
Bordetella pertussis s 15 56
Bordetella pertussis s 15 58
Bordetella pertussis s 14 54
Bordetella pertussis s 15 58
Bordetella pertussis s 14 55
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 14 55
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 14 54
Bordetella pertussis s 15 57
Bordetella pertussis s 14 55
Bordetella pertussis s 16 59
Bordetella pertussis s 14 55
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 58
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 16 59
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 16 59
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 14 55
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 16 59
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 58
Bordetella pertussis s 15 58
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 56
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 16 59
Bordetella pertussis s 15 58
Bordetella pertussis s 15 58
Bordetella pertussis s 15 58
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 58
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 16 59
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 14 55
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 14 55
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 14 55
Xanthomonas oryzae pv. oryzae s 4 18
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 15 58
Bordetella pertussis s 14 55
Bordetella pertussis s 14 55
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 58
Bordetella pertussis s 11 44
Bordetella pertussis s 15 57
Bordetella pertussis s 16 59
Bordetella pertussis s 15 57
Bordetella pertussis s 14 55
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Lactobacillus reuteri s 14 52
Lactobacillus paracasei s 7 28
Endozoicomonas ascidiicola s 6 24
Endozoicomonas ascidiicola s 4 20
Lactobacillus plantarum s 9 35
Lactobacillus gallinarum s 6 26
Xanthomonas oryzae pv. oryzae s 4 20
Bordetella pertussis s 14 55
Bordetella pertussis s 16 60
Bordetella pertussis s 15 56
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 16 59
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Xanthomonas oryzae pv. oryzae s 4 19
Xanthomonas oryzae pv. oryzae s 5 22
Xanthomonas oryzae pv. oryzae s 4 18
Piscirickettsia salmonis s 19 70
Piscirickettsia salmonis s 16 61
Piscirickettsia salmonis s 8 32
Piscirickettsia salmonis s 7 30
Piscirickettsia salmonis s 8 31
Piscirickettsia salmonis s 8 31
Piscirickettsia salmonis s 11 44
Piscirickettsia salmonis s 18 66
Piscirickettsia salmonis s 18 68
Piscirickettsia salmonis s 17 63
Piscirickettsia salmonis s 17 63
Piscirickettsia salmonis s 18 67
Piscirickettsia salmonis s 18 68
Piscirickettsia salmonis s 17 63
Piscirickettsia salmonis s 17 63
Piscirickettsia salmonis s 18 67
Lactobacillus paracasei s 8 32
Bordetella pertussis s 15 56
Bordetella pertussis s 15 58
Bordetella pertussis s 16 59
Bordetella pertussis s 15 56
Bordetella pertussis s 16 60
Bordetella pertussis s 16 59
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 14 54
Bordetella pertussis s 14 55
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 16 59
Bordetella pertussis s 14 55
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 14 55
Bordetella pertussis s 15 58
Bordetella pertussis s 15 56
Bordetella pertussis s 15 56
Bordetella pertussis s 16 60
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 14 55
Bordetella pertussis s 15 56
Bordetella pertussis s 14 55
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 56
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 14 55
Bordetella pertussis s 14 55
Mycoplasma mycoides subsp. mycoides s 5 21
Mycobacterium chimaera s 4 19
Lactobacillus plantarum s 4 17
Mycobacterium chimaera s 4 19
Lactobacillus plantarum s 4 17
Lactobacillus paracasei s 4 18
Mycobacterium mucogenicum s 5 23
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 16 59
Bordetella pertussis s 15 57
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 15 57
Bordetella pertussis s 15 58
Bordetella pertussis s 14 54
Neisseria sicca s 15 57
Bordetella pertussis s 14 53
Lactobacillus plantarum s 6 25
Gilliamella apicola s 4 20
Gilliamella apicola s 4 19
Gilliamella apicola s 4 19
Gilliamella apicola s 6 27
Gilliamella apicola s 4 17
Gilliamella apicola s 5 21
Bordetella pertussis s 15 56
Bordetella holmesii s 5 21
Lactobacillus fermentum s 4 20
Lactobacillus reuteri s 6 24
Lactobacillus reuteri s 4 18
Lactobacillus reuteri s 6 24
Bordetella pertussis s 15 56
Bordetella pertussis s 11 44
Bordetella pertussis s 14 54
Bordetella pertussis s 14 54
Lactobacillus reuteri s 12 46
Mycobacterium chimaera s 4 19
Lactobacillus fermentum s 9 35
Lactobacillus plantarum s 5 22
Lactobacillus fermentum s 4 19
Lactobacillus paracasei s 5 22
Lactobacillus brevis s 4 20
Paenibacillus larvae subsp. pulvifaciens s 7 28
Bordetella pertussis s 15 56
Paenibacillus larvae subsp. pulvifaciens s 6 26
Lactobacillus paracasei s 4 18
Lactobacillus reuteri s 17 65
Paenibacillus larvae subsp. pulvifaciens s 5 23
Lactobacillus reuteri s 5 21
Lactobacillus fermentum s 13 49
Corynebacterium striatum s 4 19
Lactobacillus brevis s 4 18
Lactobacillus brevis s 4 20
Lactobacillus fermentum s 5 23
Francisella halioticida s 33 121
Escherichia coli s 4 18
Enterobacter cloacae subsp. cloacae ATCC 13047 s 10 38
Enterococcus faecium DO s 5 23
Bradyrhizobium diazoefficiens USDA 110 s 7 30
Sinorhizobium meliloti 1021 s 6 24
Bordetella pertussis Tohama I s 60 217
Yersinia pestis CO92 s 15 58
Escherichia coli O157:H7 str. Sakai s 6 24
[Pseudomonas syringae] pv. tomato str. DC3000 s 9 36
Lactobacillus paracasei ATCC 334 s 18 68
Shigella dysenteriae Sd197 s 23 85
Sinorhizobium fredii NGR234 s 6 25
Escherichia coli IAI39 s 20 75
Shigella flexneri 2a str. 301 s 35 128

*p=pathogen;s=symbiont