Metamenu

Effective results for Roseburia inulinivorans DSM 16841 (eggnog40)

Summary

Number of putative secreted proteins: 244
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 43 eukaryotic-like domains, contained in 244 proteins (32 high, 212 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
622312.ROSEINA2194_00156(PF01131) (PF01751)(ER); mitochondrial
622312.ROSEINA2194_04159PF09820 PF08011mitochondrial
622312.ROSEINA2194_00870(PF13173)(mitochondrial)
622312.ROSEINA2194_00265(PF01554)(mitochondrial)
622312.ROSEINA2194_03261(PF08843)(mitochondrial)
622312.ROSEINA2194_02519PF09820 PF08011(plastid)
622312.ROSEINA2194_02728(PF01381)(mitochondrial)
622312.ROSEINA2194_03241(PF06541)ER
622312.ROSEINA2194_02753(PF01381)(mitochondrial)
622312.ROSEINA2194_00589(PF08843)(mitochondrial)
622312.ROSEINA2194_01471(PF01381)mitochondrial
622312.ROSEINA2194_04331(PF09587)ER
622312.ROSEINA2194_00483(PF01554)ER; (ER)
622312.ROSEINA2194_03599(PF14310)ER
622312.ROSEINA2194_03571(PF00239)mitochondrial; (mitochondrial)
622312.ROSEINA2194_00146PF03432mitochondrial
622312.ROSEINA2194_01023(PF01554)ER
622312.ROSEINA2194_01153(PF01381)(mitochondrial)
622312.ROSEINA2194_04272(PF01554)(ER)
622312.ROSEINA2194_04276(PF01554)(mitochondrial)
622312.ROSEINA2194_02338(PF09587)ER
622312.ROSEINA2194_01948(PF06541)ER
622312.ROSEINA2194_03413(PF03442)ER
622312.ROSEINA2194_02926(PF13173)mitochondrial
622312.ROSEINA2194_01551(PF01554)ER
622312.ROSEINA2194_02915(PF01554)(mitochondrial)
622312.ROSEINA2194_04196(PF01381)mitochondrial; (mitochondrial)
622312.ROSEINA2194_01107(PF01807)mitochondrial
622312.ROSEINA2194_00565(PF01554)ER
622312.ROSEINA2194_03050(PF01554)mitochondrial; (mitochondrial)
622312.ROSEINA2194_02879(PF09587)ER
622312.ROSEINA2194_04233(PF13173)(mitochondrial)
622312.ROSEINA2194_00641(PF08843)(mitochondrial)
622312.ROSEINA2194_03516(PF01554)(ER)
622312.ROSEINA2194_00398(PF13524)(mitochondrial)
622312.ROSEINA2194_00393(PF00977)(ER); (mitochondrial)
622312.ROSEINA2194_00248(PF01554)ER
622312.ROSEINA2194_03069PF09820 PF08011plastid
622312.ROSEINA2194_02829(PF01554)(mitochondrial)
622312.ROSEINA2194_01655(PF00239)(mitochondrial)
622312.ROSEINA2194_04374(PF01554)ER
622312.ROSEINA2194_04375(PF01554)(ER)
622312.ROSEINA2194_04149PF09820 PF08011
622312.ROSEINA2194_02020PF09820 PF08011
622312.ROSEINA2194_03133(PF13173)plastid
622312.ROSEINA2194_01064(PF00239)(mitochondrial)
622312.ROSEINA2194_01087PF03432(plastid)
622312.ROSEINA2194_04168PF09820 PF08011
622312.ROSEINA2194_00581(PF01381)(mitochondrial)
622312.ROSEINA2194_04108(PF06165) (PF17167)
622312.ROSEINA2194_00938(PF01131) (PF01751)
622312.ROSEINA2194_01144(PF01131) (PF01751)
622312.ROSEINA2194_02436(PF01131) (PF01751)
622312.ROSEINA2194_01309(PF01131) (PF01751)
622312.ROSEINA2194_03410PF09820 PF08011
622312.ROSEINA2194_01556PF09820 PF08011
622312.ROSEINA2194_03409(PF04326)plastid
622312.ROSEINA2194_01768(PF01554)(ER)
622312.ROSEINA2194_03431(PF13155) (PF01807)
622312.ROSEINA2194_00214(PF06541)(ER)
622312.ROSEINA2194_00426PF09820 PF08011
622312.ROSEINA2194_00427PF09820 PF08011
622312.ROSEINA2194_01342(PF14310)(ER)
622312.ROSEINA2194_01341(PF06165) (PF17167)
622312.ROSEINA2194_01348(PF01131) (PF01751)not used
622312.ROSEINA2194_01909PF09820 PF08011
622312.ROSEINA2194_00654(PF01131) (PF01751)
622312.ROSEINA2194_03070PF09820 PF08011
622312.ROSEINA2194_02496(PF06165) (PF17167)
622312.ROSEINA2194_02018(PF01381)
622312.ROSEINA2194_02839(PF01381)
622312.ROSEINA2194_01426PF03432
622312.ROSEINA2194_01732(PF01487)
622312.ROSEINA2194_00280(PF01381)
622312.ROSEINA2194_01932(PF00977)
622312.ROSEINA2194_03393(PF14310)
622312.ROSEINA2194_01766(PF02446)
622312.ROSEINA2194_01815(PF00239)
622312.ROSEINA2194_01247(PF01795)
622312.ROSEINA2194_01412(PF12224)
622312.ROSEINA2194_04170(PF11799)
622312.ROSEINA2194_01419(PF13155)
622312.ROSEINA2194_01258(PF13155)
622312.ROSEINA2194_01076(PF00239)
622312.ROSEINA2194_00474(PF01554)
622312.ROSEINA2194_00274(PF02275)
622312.ROSEINA2194_03253(PF01381)
622312.ROSEINA2194_00593(PF01381)
622312.ROSEINA2194_00851(PF14310)
622312.ROSEINA2194_00852(PF13173)
622312.ROSEINA2194_02721(PF13524)
622312.ROSEINA2194_02959(PF01807)
622312.ROSEINA2194_04347(PF01554)
622312.ROSEINA2194_00628(PF01381)
622312.ROSEINA2194_00624(PF00239)
622312.ROSEINA2194_00625(PF00239)
622312.ROSEINA2194_00828(PF01381)
622312.ROSEINA2194_03324(PF00239)not used
622312.ROSEINA2194_00136(PF04607)
622312.ROSEINA2194_02577PF09612
622312.ROSEINA2194_01273(PF12224)
622312.ROSEINA2194_01878(PF01554)
622312.ROSEINA2194_01505(PF02446)
622312.ROSEINA2194_01059PF03432
622312.ROSEINA2194_01987(PF00562)
622312.ROSEINA2194_03239(PF01751)
622312.ROSEINA2194_03768(PF06838)
622312.ROSEINA2194_03560(PF01381)
622312.ROSEINA2194_03563(PF01381)
622312.ROSEINA2194_04037(PF01381)
622312.ROSEINA2194_01193PF03432
622312.ROSEINA2194_00484(PF01554)
622312.ROSEINA2194_00025(PF01381)
622312.ROSEINA2194_03911(PF04253)
622312.ROSEINA2194_03912PF03432
622312.ROSEINA2194_03916(PF13155)
622312.ROSEINA2194_03175(PF01880)
622312.ROSEINA2194_02177(PF01880)
622312.ROSEINA2194_02773(PF11799)
622312.ROSEINA2194_02777(PF01487)
622312.ROSEINA2194_02955(PF00239)
622312.ROSEINA2194_03573(PF00239)
622312.ROSEINA2194_03572(PF00239)
622312.ROSEINA2194_03577(PF01554)
622312.ROSEINA2194_02798PF08011
622312.ROSEINA2194_02799PF09820
622312.ROSEINA2194_01212(PF01969)
622312.ROSEINA2194_01142(PF13173)
622312.ROSEINA2194_04265(PF08843)
622312.ROSEINA2194_04261(PF01381)
622312.ROSEINA2194_03967(PF01381)
622312.ROSEINA2194_03366(PF08843)
622312.ROSEINA2194_02168(PF04607)
622312.ROSEINA2194_03141(PF04607)
622312.ROSEINA2194_02309PF09820
622312.ROSEINA2194_03546(PF01381)
622312.ROSEINA2194_02234(PF13173)
622312.ROSEINA2194_02433(PF05257)
622312.ROSEINA2194_02438(PF01807)
622312.ROSEINA2194_01200PF05479
622312.ROSEINA2194_01843(PF13151)
622312.ROSEINA2194_01845(PF11799)
622312.ROSEINA2194_01159(PF00239)
622312.ROSEINA2194_01151PF03432
622312.ROSEINA2194_04300(PF02446)
622312.ROSEINA2194_03214(PF01381)
622312.ROSEINA2194_02931(PF00239)
622312.ROSEINA2194_02938(PF01381)
622312.ROSEINA2194_02939PF03432
622312.ROSEINA2194_02844(PF02275)
622312.ROSEINA2194_03553(PF00239)
622312.ROSEINA2194_03555(PF00239)
622312.ROSEINA2194_03554(PF00239)
622312.ROSEINA2194_01833PF16515not used
622312.ROSEINA2194_01302PF03432
622312.ROSEINA2194_01300(PF01381)
622312.ROSEINA2194_01497(PF01795)
622312.ROSEINA2194_01161(PF00239)not used
622312.ROSEINA2194_00540(PF01554)
622312.ROSEINA2194_01548(PF01381)
622312.ROSEINA2194_00013(PF11799)
622312.ROSEINA2194_00308(PF00977)
622312.ROSEINA2194_00307(PF00977)
622312.ROSEINA2194_03305(PF00239)
622312.ROSEINA2194_03415(PF03442)
622312.ROSEINA2194_02928(PF01381)
622312.ROSEINA2194_02850(PF12646)not used
622312.ROSEINA2194_02217(PF13173)
622312.ROSEINA2194_01793(PF00239)
622312.ROSEINA2194_01312(PF05257)
622312.ROSEINA2194_01953(PF01381)
622312.ROSEINA2194_01171(PF01381)not used
622312.ROSEINA2194_01173(PF01381)
622312.ROSEINA2194_00571(PF14310)
622312.ROSEINA2194_00208(PF01381)
622312.ROSEINA2194_01986(PF00562)
622312.ROSEINA2194_00190(PF04326)
622312.ROSEINA2194_02684(PF01554)
622312.ROSEINA2194_02688(PF01969)
622312.ROSEINA2194_03534(PF06541)
622312.ROSEINA2194_03627PF02407
622312.ROSEINA2194_02467(PF04607)
622312.ROSEINA2194_01817(PF00239)
622312.ROSEINA2194_01767(PF04607)
622312.ROSEINA2194_01769(PF01554)
622312.ROSEINA2194_04191(PF01381)
622312.ROSEINA2194_04192(PF11799)
622312.ROSEINA2194_01104(PF00239)
622312.ROSEINA2194_00366(PF01554)
622312.ROSEINA2194_03321(PF01807)
622312.ROSEINA2194_00187(PF01381)
622312.ROSEINA2194_00189PF03432
622312.ROSEINA2194_03186(PF11799)
622312.ROSEINA2194_02122(PF04326)
622312.ROSEINA2194_02120(PF00239)
622312.ROSEINA2194_03052(PF01554)
622312.ROSEINA2194_03501(PF00239)
622312.ROSEINA2194_02690(PF14310)
622312.ROSEINA2194_02878(PF09587)
622312.ROSEINA2194_03616(PF01381)
622312.ROSEINA2194_02678(PF00239)
622312.ROSEINA2194_02670(PF13155)
622312.ROSEINA2194_01779PF08947
622312.ROSEINA2194_01373(PF05257)not used
622312.ROSEINA2194_04189(PF02275)
622312.ROSEINA2194_01114(PF01381)
622312.ROSEINA2194_01975(PF13524)
622312.ROSEINA2194_01976(PF13524)
622312.ROSEINA2194_01597PF08011
622312.ROSEINA2194_04238(PF01381)
622312.ROSEINA2194_03991(PF01381)
622312.ROSEINA2194_03769(PF06838)
622312.ROSEINA2194_02800(PF01381)
622312.ROSEINA2194_02801(PF01381)
622312.ROSEINA2194_02649(PF14310)
622312.ROSEINA2194_01343(PF14310)
622312.ROSEINA2194_01906(PF14310)
622312.ROSEINA2194_00509(PF01554)
622312.ROSEINA2194_03450(PF01554)
622312.ROSEINA2194_04301(PF02446)
622312.ROSEINA2194_01355(PF04326)
622312.ROSEINA2194_01751PF03432
622312.ROSEINA2194_01753(PF01381)
622312.ROSEINA2194_00089(PF01751)
622312.ROSEINA2194_00394(PF13524)
622312.ROSEINA2194_00885(PF13173)
622312.ROSEINA2194_00240(PF01381)
622312.ROSEINA2194_02005(PF13173)
622312.ROSEINA2194_02390(PF01381)
622312.ROSEINA2194_03666(PF01381)
622312.ROSEINA2194_03710(PF00977)
622312.ROSEINA2194_04227(PF13524)
622312.ROSEINA2194_02538(PF05704)
622312.ROSEINA2194_01438(PF05257)
622312.ROSEINA2194_01656(PF00239)
622312.ROSEINA2194_04390(PF14310)
622312.ROSEINA2194_04391(PF04607)
622312.ROSEINA2194_00387(PF13524)
622312.ROSEINA2194_04370(PF13173)
622312.ROSEINA2194_00388(PF13524)
622312.ROSEINA2194_04372(PF01381)
622312.ROSEINA2194_00678(PF01381)
622312.ROSEINA2194_03477(PF12437)
622312.ROSEINA2194_03478(PF12437)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================