Metamenu

Effective results for Dorea formicigenerans ATCC 27755 (eggnog40)

Summary

Number of putative secreted proteins: 115
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 20 eukaryotic-like domains, contained in 115 proteins (2 high, 113 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
411461.DORFOR_03113(PF01554)ER
411461.DORFOR_00643(PF12821)ER
411461.DORFOR_02651(PF01381)(mitochondrial)
411461.DORFOR_01857(PF01554)(ER)
411461.DORFOR_01063(PF00137)ER
411461.DORFOR_02520PF04733ER
411461.DORFOR_02469(PF05684)ER
411461.DORFOR_01005(PF01554)(mitochondrial)
411461.DORFOR_02103(PF01381)(mitochondrial)
411461.DORFOR_02853(PF00137)ER
411461.DORFOR_01746(PF01381)ER; (ER)
411461.DORFOR_00975(PF05684)ER
411461.DORFOR_02833(PF00137)(ER); ER
411461.DORFOR_01827(PF05698)ER
411461.DORFOR_00760(PF01554)(ER)
411461.DORFOR_00441(PF01554)(ER)
411461.DORFOR_01880(PF01381)mitochondrial; (mitochondrial)
411461.DORFOR_02694(PF01381)mitochondrial
411461.DORFOR_01984(PF01554)ER; (ER)
411461.DORFOR_00098(PF05698)(mitochondrial)
411461.DORFOR_02232(PF01554)plastid
411461.DORFOR_02639(PF01381)(mitochondrial)
411461.DORFOR_01912(PF01381)(mitochondrial)
411461.DORFOR_01883(PF01554)(ER)
411461.DORFOR_00271(PF01381)(plastid)
411461.DORFOR_03116(PF01795)
411461.DORFOR_03110(PF04607)
411461.DORFOR_02732(PF01381)
411461.DORFOR_02420(PF01381)
411461.DORFOR_01990(PF01381)
411461.DORFOR_00263(PF01381)
411461.DORFOR_03299(PF01381)
411461.DORFOR_03296(PF01381)
411461.DORFOR_03125PF00627
411461.DORFOR_01704(PF01416)
411461.DORFOR_02407(PF01381)
411461.DORFOR_02391(PF02127)
411461.DORFOR_01845(PF02127)
411461.DORFOR_00629(PF01807)
411461.DORFOR_01061(PF01813)
411461.DORFOR_00620(PF01381)
411461.DORFOR_02091(PF01381)
411461.DORFOR_02972(PF01381)
411461.DORFOR_02677(PF01381)
411461.DORFOR_01380(PF12821)
411461.DORFOR_01128(PF01381)
411461.DORFOR_00839(PF01554)
411461.DORFOR_00631(PF01554)
411461.DORFOR_02263(PF01381)
411461.DORFOR_02262(PF01381)
411461.DORFOR_01869(PF01807)
411461.DORFOR_01263(PF02127)
411461.DORFOR_02111(PF01131)
411461.DORFOR_02840(PF01381)
411461.DORFOR_00286(PF01554)
411461.DORFOR_00516(PF01381)
411461.DORFOR_03092(PF01381)
411461.DORFOR_03077(PF01381)
411461.DORFOR_02707(PF01381)
411461.DORFOR_00032(PF01381)
411461.DORFOR_02858(PF01813)
411461.DORFOR_02856(PF16886)
411461.DORFOR_02855(PF01991)
411461.DORFOR_03067(PF04607)
411461.DORFOR_02047(PF01381)
411461.DORFOR_02447(PF01381)
411461.DORFOR_01244(PF04607)
411461.DORFOR_00978(PF02127)
411461.DORFOR_00406(PF01381)
411461.DORFOR_03276(PF01416)
411461.DORFOR_00363(PF01554)
411461.DORFOR_03261(PF01554)
411461.DORFOR_03267(PF13240)
411461.DORFOR_03042(PF01381)
411461.DORFOR_03196(PF01807)
411461.DORFOR_03198(PF01131)
411461.DORFOR_00882(PF01795)
411461.DORFOR_01577(PF01554)
411461.DORFOR_00798(PF01554)
411461.DORFOR_00423(PF01554)
411461.DORFOR_03210(PF01131)
411461.DORFOR_03035(PF12646)
411461.DORFOR_01218(PF13240)
411461.DORFOR_01961(PF01381)
411461.DORFOR_00769(PF13240)
411461.DORFOR_00232(PF01416)
411461.DORFOR_03201(PF01807)
411461.DORFOR_03334(PF01381)
411461.DORFOR_03336(PF01381)
411461.DORFOR_03158(PF01381)
411461.DORFOR_00848(PF04607)
411461.DORFOR_02309(PF02475)
411461.DORFOR_01942(PF01381)
411461.DORFOR_01307(PF13240)
411461.DORFOR_01306(PF13240)
411461.DORFOR_01304(PF13240)
411461.DORFOR_01303(PF13240)
411461.DORFOR_00211(PF01381)
411461.DORFOR_01639(PF01131)
411461.DORFOR_03226(PF01381)
411461.DORFOR_03222(PF01807)
411461.DORFOR_03171(PF01381)
411461.DORFOR_02202(PF01554)
411461.DORFOR_02684(PF01131)
411461.DORFOR_02999(PF04607)
411461.DORFOR_02998(PF04607)
411461.DORFOR_03131(PF01381)
411461.DORFOR_03109(PF04607)
411461.DORFOR_01989(PF01381)
411461.DORFOR_01188(PF01381)
411461.DORFOR_01503(PF12821)
411461.DORFOR_01059(PF16886)
411461.DORFOR_00694(PF01381)
411461.DORFOR_00691(PF05698)
411461.DORFOR_00905(PF01131)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================