Metamenu

Genomes encoding eukaryotic-like proteins

PF01416 tRNA pseudouridine synthase

Copy number in non-pathogens:
Mean=1.06 Stddev=0.31

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Staphylococcus haemolyticus s 6 3
Enterococcus faecium s 6 3
Enterococcus faecium s 6 3
Clostridium ihumii AP5 s 6 3
[Ruminococcus] torques s 6 3
[Ruminococcus] torques s 6 3
[Ruminococcus] torques s 6 3
Faecalicatena contorta s 6 3
[Ruminococcus] torques s 6 3
Ruminococcus sp. AT10 s 6 3
Dorea formicigenerans ATCC 27755 s 6 3
Coprococcus comes ATCC 27758 s 6 3
Ruminococcus lactaris ATCC 29176 s 6 3
Tyzzerella nexilis DSM 1787 s 6 3
[Clostridium] hylemonae DSM 15053 s 6 3
Dorea sp. D27 s 6 3
[Clostridium] scindens ATCC 35704 s 6 3
Dorea longicatena DSM 13814 s 6 3
Ruminococcus gnavus ATCC 29149 s 6 3
Ruminococcus lactaris CC59_002D s 6 3
Ruminococcus gnavus CC55_001C s 6 3
Lachnospiraceae bacterium M18-1 s 6 3
Clostridium sp. ASF502 s 6 3
Bacillus anthracis str. Tsiankovskii-I s 6 3
Lachnospira multipara ATCC 19207 s 6 3
Clostridium sp. D5 s 6 3
Lachnospiraceae bacterium 1_1_57FAA s 6 3
Lachnospiraceae bacterium 2_1_58FAA s 6 3
Lachnospiraceae bacterium 5_1_57FAA s 6 3
Lachnospiraceae bacterium 9_1_43BFAA s 6 3
Lachnospiraceae bacterium 3_1_46FAA s 6 3
Lachnospiraceae bacterium 8_1_57FAA s 6 3
Lachnospiraceae bacterium 6_1_37FAA s 6 3
Lachnospiraceae bacterium 2_1_46FAA s 6 3
Dorea formicigenerans 4_6_53AFAA s 6 3
Clostridium sp. BL8 s 6 3
Ruminococcus gnavus AGR2154 s 6 3
Coprococcus sp. HPP0074 s 6 3
Coprococcus sp. HPP0048 s 6 3
[Eubacterium] eligens ATCC 27750 s 6 3
Butyrivibrio sp. AE2032 s 6 3
Enterococcus faecium s 6 3

*p=pathogen;s=symbiont