Metamenu

Effective results for Acetobacterium woodii DSM 1030 (eggnog40)

Summary

Number of putative secreted proteins: 224
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 40 eukaryotic-like domains, contained in 224 proteins (59 high, 165 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
931626.Awo_c30680(PF14478)ER
931626.Awo_c23940(PF00137)ER
931626.Awo_c18350(PF01094)ER
931626.Awo_c02630(PF01966)ER
931626.Awo_c26720(PF13306)ER
931626.Awo_c33750(PF01966)ER
931626.Awo_c28010PF02607 (PF00809) PF02310
931626.Awo_c04740(PF04326)(mitochondrial)
931626.Awo_c06180(PF00465)(mitochondrial)
931626.Awo_c19570(PF01966)ER
931626.Awo_c14040(PF01966)ER
931626.Awo_c15400(PF00112)ER
931626.Awo_c04000PF02310mitochondrial
931626.Awo_c03740PF10662(mitochondrial)
931626.Awo_c30640(PF14478)ER
931626.Awo_c23360PF07892(mitochondrial)
931626.Awo_c30670(PF14478)ER
931626.Awo_c23500(PF12483)ER
931626.Awo_c23770(PF02492)ER
931626.Awo_c26580PF10662(mitochondrial)
931626.Awo_c30610(PF14478)ER
931626.Awo_c27110(PF01966)ER
931626.Awo_c22010(PF13187)ER
931626.Awo_c27840(PF02492)(mitochondrial)
931626.Awo_c01810(PF14249)(mitochondrial)
931626.Awo_c05790(PF01966)ER
931626.Awo_c26120(PF03321)(mitochondrial); mitochondrial
931626.Awo_c18450(PF00112)ER
931626.Awo_c34130(PF13306)ER
931626.Awo_c25410(PF00465)(ER)
931626.Awo_c28910PF10662mitochondrial
931626.Awo_c18240(PF02492)(ER)
931626.Awo_c05420PF02607 PF02310
931626.Awo_c23060(PF13187)(plastid)
931626.Awo_c03900(PF14691) (PF13534)
931626.Awo_c23710PF02607 PF02310
931626.Awo_c11810PF02607 PF02310
931626.Awo_c14990(PF14691) (PF13534)
931626.Awo_c07930(PF00543)(mitochondrial)
931626.Awo_c05190PF02607 PF02310
931626.Awo_c08440PF02607 PF02310
931626.Awo_c07110(PF02492)(ER)
931626.Awo_c06880(PF00465)(mitochondrial)
931626.Awo_c02170(PF00137)(plastid)
931626.Awo_c08450PF02607 PF02310
931626.Awo_c16500PF02607 PF02310
931626.Awo_c22750PF02607 PF02310
931626.Awo_c02180(PF00137)(plastid)
931626.Awo_c15650PF02607 PF02310
931626.Awo_c27870PF02607 PF02310
931626.Awo_c27180(PF14691) (PF13534)
931626.Awo_c07320PF02607 PF02310
931626.Awo_c09200PF02607 PF02310
931626.Awo_c15280PF02607 PF02310
931626.Awo_c23740PF02607 PF02310
931626.Awo_c07400PF02607 PF02310
931626.Awo_c16670PF02607 PF02310
931626.Awo_c22800PF02607 PF02310
931626.Awo_c23250PF02607 PF02310
931626.Awo_c05460PF02607 PF02310
931626.Awo_c18300PF02607 PF02310
931626.Awo_c18260PF02607 PF02310
931626.Awo_c15790PF02607 PF02310
931626.Awo_c07550PF02607 PF02310
931626.Awo_c27350PF01208
931626.Awo_c14890(PF00465)
931626.Awo_c04150(PF00465)
931626.Awo_c24260(PF09370)
931626.Awo_c04010PF02310
931626.Awo_c08250(PF13237)
931626.Awo_c14630(PF01964)
931626.Awo_c07120PF01208
931626.Awo_c07920(PF00543)
931626.Awo_c14950PF01208
931626.Awo_c13690(PF10437)
931626.Awo_c33120(PF02492)
931626.Awo_c08260(PF13237)
931626.Awo_c07000(PF00543)
931626.Awo_c20700(PF13237)
931626.Awo_c15660(PF00809)
931626.Awo_c34780(PF01610)
931626.Awo_c06990(PF00543)
931626.Awo_c08840(PF04326)
931626.Awo_c01890(PF00543)
931626.Awo_c17560(PF01966)
931626.Awo_c17360(PF00465)
931626.Awo_c32400(PF13534)
931626.Awo_c17980(PF13306)
931626.Awo_c08070PF02310
931626.Awo_c05180(PF00809)
931626.Awo_c20820(PF01966)
931626.Awo_c23730PF01208
931626.Awo_c04030PF02310
931626.Awo_c24730(PF01610)
931626.Awo_c11740(PF01610)
931626.Awo_c19000(PF13306)
931626.Awo_c33740(PF03321)
931626.Awo_c18280(PF00809)
931626.Awo_c15800PF01208
931626.Awo_c14600PF02310
931626.Awo_c07730(PF00543)
931626.Awo_c34480(PF13187)
931626.Awo_c06860PF01208
931626.Awo_c12590PF07892
931626.Awo_c12730PF07892
931626.Awo_c20610(PF01795)
931626.Awo_c34740(PF01610)
931626.Awo_c05200PF01208
931626.Awo_c23390(PF10437)
931626.Awo_c11770PF01208
931626.Awo_c09270(PF04961)
931626.Awo_c11550(PF13306)
931626.Awo_c19630(PF13187)
931626.Awo_c21000(PF14307)
931626.Awo_c20530(PF14512)
931626.Awo_c24280(PF09370)
931626.Awo_c08830(PF01966)
931626.Awo_c02160(PF00137)
931626.Awo_c12140PF01208
931626.Awo_c13090(PF08271)
931626.Awo_c17400(PF01966)
931626.Awo_c17390(PF01966)
931626.Awo_c19950PF02310
931626.Awo_c31850(PF13187)not used
931626.Awo_c32360(PF01969)
931626.Awo_c18390(PF13187)
931626.Awo_c22740(PF00809)
931626.Awo_c08020(PF01966)
931626.Awo_c25230(PF13237)
931626.Awo_c06220(PF00465)
931626.Awo_c06310(PF00465)
931626.Awo_c05530(PF02492)
931626.Awo_c31530(PF04326)
931626.Awo_c31710(PF13306)
931626.Awo_c32750(PF01966)
931626.Awo_c33800PF01208
931626.Awo_c32370(PF13534)
931626.Awo_c09210(PF00809)
931626.Awo_c14650(PF02492)
931626.Awo_c29580(PF03054)
931626.Awo_c21020(PF14307)
931626.Awo_c31880(PF02492)
931626.Awo_c12380(PF13534)
931626.Awo_c27850PF01208
931626.Awo_c10920(PF00809)
931626.Awo_c13360(PF14307)
931626.Awo_c02950(PF00465)
931626.Awo_c33810(PF06100)
931626.Awo_c01780(PF01964)
931626.Awo_c15020(PF06100)
931626.Awo_c26130(PF03321)
931626.Awo_c14640(PF01964)
931626.Awo_c00780(PF12640)
931626.Awo_c31890(PF02492)
931626.Awo_c12550(PF10437)
931626.Awo_c07330PF01208
931626.Awo_c10930(PF01966)
931626.Awo_c17070(PF01610)
931626.Awo_c30730(PF13306)
931626.Awo_c10730(PF00809)
931626.Awo_c11730(PF01610)
931626.Awo_c19980(PF01966)
931626.Awo_c22060(PF13237)
931626.Awo_c22790(PF02492)
931626.Awo_c05900(PF13187)
931626.Awo_c23750(PF00809)
931626.Awo_c15290PF01208
931626.Awo_c30380(PF01966)
931626.Awo_c05650(PF01966)
931626.Awo_c25760(PF13534)
931626.Awo_c05490PF01208
931626.Awo_c27040(PF13187)
931626.Awo_c16660PF01208
931626.Awo_c35040(PF13290)
931626.Awo_c23030(PF01969)
931626.Awo_c02840PF01208
931626.Awo_c09220PF01208
931626.Awo_c33610(PF04326)
931626.Awo_c26790(PF01610)
931626.Awo_c05860(PF01966)
931626.Awo_c30560(PF13306)
931626.Awo_c21410(PF14691)
931626.Awo_c34240(PF14691)
931626.Awo_c26800(PF01610)
931626.Awo_c05260(PF01966)
931626.Awo_c11880(PF14691)
931626.Awo_c23800(PF03054)
931626.Awo_c18270PF01208
931626.Awo_c14160(PF13237)
931626.Awo_c14690(PF03266)
931626.Awo_c15740(PF13237)
931626.Awo_c09560(PF01795)
931626.Awo_c30570(PF13306)
931626.Awo_c05670(PF00465)
931626.Awo_c16260(PF01966)
931626.Awo_c23240PF01208
931626.Awo_c30980(PF13290)
931626.Awo_c02910(PF03054)
931626.Awo_c13920(PF13187)
931626.Awo_c20690PF01208
931626.Awo_c04400(PF01610)
931626.Awo_c05660(PF01966)
931626.Awo_c07170(PF16952)
931626.Awo_c07370(PF14691)
931626.Awo_c34180(PF04961)
931626.Awo_c24440(PF13534)
931626.Awo_c17320(PF00465)
931626.Awo_c33460(PF14512)
931626.Awo_c11790(PF13187)
931626.Awo_c00730(PF00465)
931626.Awo_c14140(PF01966)
931626.Awo_c15230(PF01966)
931626.Awo_c07760(PF00543)
931626.Awo_c23260(PF00809)
931626.Awo_c24450(PF00465)
931626.Awo_c17770PF07892
931626.Awo_c11780(PF14691)
931626.Awo_c00990(PF02492)
931626.Awo_c23920(PF01991)
931626.Awo_c18530(PF01966)
931626.Awo_c08390PF01208
931626.Awo_c32870(PF13290)
931626.Awo_c05730(PF01966)
931626.Awo_c07390PF01208

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================