Effective results for Enterobacter cloacae subsp. cloacae ATCC 13047 (eggnog40)

Summary

Number of putative secreted proteins: 802
- Predicted by EffectiveT3: 168 (high confidence), 349 (low confidence)
- Predicted by EffectiveCCBD: 24 within, 20 before, 48 behind expected region 25..70aa
- Predicted by T4SEpre: 110
- Predicted by EffectiveELD: 16 eukaryotic-like domains, contained in 145 proteins (71 high, 74 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type III, (Type IV), Type VI

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
716541.ECL_04202(+)(PF00665) PF13276mitochondrial
716541.ECL_02475PF13276 (PF13683)(mitochondrial)
716541.ECL_03211(+)(PF00665) PF13276mitochondrial
716541.ECL_01698(+)(PF00665) PF13276mitochondrial
716541.ECL_03811PF13276 (PF13683)(mitochondrial)
716541.ECL_03481PF13276 (PF13683)(mitochondrial)
716541.ECL_03483(+)(PF00665) PF13276mitochondrial
716541.ECL_00164PF13276 (PF13683)(mitochondrial)
716541.ECL_02710PF13276 (PF13683)(mitochondrial)
716541.ECL_05017(+)(PF00665) PF13276mitochondrial
716541.ECL_00394PF13276 (PF13683)(mitochondrial)
716541.ECL_03702PF13276 (PF13683)(mitochondrial)
716541.ECL_04895(+)(PF00665) PF13276mitochondrial
716541.ECL_03733+(PF05231)ER
716541.ECL_02588PF13276 (PF13683)(mitochondrial)
716541.ECL_02130PF13276 (PF13683)(mitochondrial)
716541.ECL_01116(+)(PF00665) PF13276mitochondrial
716541.ECL_03418PF13276 (PF13683)(mitochondrial)
716541.ECL_02065(+)(PF00665) PF13276mitochondrial
716541.ECL_02308+(mitochondrial)
716541.ECL_04445(PF00577)mitochondrial
716541.ECL_01121(PF05231)ER
716541.ECL_04209(PF00665)(mitochondrial); (plastid)
716541.ECL_02787+ER
716541.ECL_01280(PF00345)ER
716541.ECL_04832+ER
716541.ECL_02556+(mitochondrial); (plastid)
716541.ECL_03229+ER
716541.ECL_01686+mitochondrial
716541.ECL_03020(>)ER
716541.ECL_00071(PF00345)ER
716541.ECL_02647(>)ER
716541.ECL_00226+(ER)
716541.ECL_04322+ER
716541.ECL_04554+ER
716541.ECL_00482(PF00665)mitochondrial
716541.ECL_04170(>)ER
716541.ECL_00065(PF00345)ER
716541.ECL_00064(PF00577)ER
716541.ECL_01758+ER
716541.ECL_04446+ER
716541.ECL_02990+ER
716541.ECL_03699(>)(mitochondrial)
716541.ECL_02401(>)mitochondrial
716541.ECL_04616(>)ER
716541.ECL_00055+ER
716541.ECL_04809(>)ER
716541.ECL_03591(+)+(PF00665) PF13276
716541.ECL_00162+(ER)
716541.ECL_03217(PF00665)(mitochondrial); (plastid)
716541.ECL_02984+ER
716541.ECL_04374(PF00345)ER
716541.ECL_04373(PF00577)ER
716541.ECL_00462(PF00665)mitochondrial
716541.ECL_01189+ER
716541.ECL_01180+(mitochondrial)
716541.ECL_04606(PF00345)ER
716541.ECL_04605(PF00577)ER
716541.ECL_04604(>)ER
716541.ECL_03580(PF00665)(mitochondrial); (plastid)
716541.ECL_00130(<)(ER)
716541.ECL_04901+(mitochondrial)
716541.ECL_00917+ER
716541.ECL_02265+ER
716541.ECL_02280(PF00665)(mitochondrial); (plastid)
716541.ECL_00851(<)ER
716541.ECL_02380(PF00577)ER
716541.ECL_05044+(mitochondrial)
716541.ECL_05084(PF00577)ER
716541.ECL_05085(PF00345)ER
716541.ECL_01097(>)ER
716541.ECL_02179(PF13347)(ER)
716541.ECL_02177+(mitochondrial)
716541.ECL_02398(>)ER
716541.ECL_03029+(>)(ER)
716541.ECL_03270(>)ER
716541.ECL_00092(PF00345)(mitochondrial)
716541.ECL_00091(PF00577)ER
716541.ECL_00196(+)+(mitochondrial); plastid
716541.ECL_01410(PF00577)ER
716541.ECL_01707+(ER)
716541.ECL_00940(PF00577)ER
716541.ECL_00941(PF00345)(ER)
716541.ECL_04394+ER
716541.ECL_01962+ER
716541.ECL_00897(<)(mitochondrial)
716541.ECL_00556+(mitochondrial)
716541.ECL_00372(PF00345)(ER); (plastid)
716541.ECL_00371(PF00577)ER
716541.ECL_05063+ER
716541.ECL_05116+(mitochondrial)
716541.ECL_02932(PF00577)(ER)
716541.ECL_02931(PF00345)ER
716541.ECL_00416+ER
716541.ECL_04419(PF00959)ER
716541.ECL_01281(PF00577)ER
716541.ECL_01283+ER
716541.ECL_03866(PF07678)ER
716541.ECL_04139+ER
716541.ECL_00343(>)ER
716541.ECL_01355+(ER)
716541.ECL_05109+ER
716541.ECL_05108(PF13347)ER
716541.ECL_02125+ER
716541.ECL_02237+ER
716541.ECL_02833(PF00665)(mitochondrial); (plastid)
716541.ECL_00573+ER
716541.ECL_01626(>)ER; (ER)
716541.ECL_04958+ER
716541.ECL_01472(>)ER
716541.ECL_00505+(mitochondrial)
716541.ECL_01471+ER
716541.ECL_00326(>)(mitochondrial); mitochondrial
716541.ECL_00037(PF05231)ER
716541.ECL_02597+ER; (ER)
716541.ECL_03083(<)(ER)
716541.ECL_03310(>)(mitochondrial)
716541.ECL_01409(PF00345)ER
716541.ECL_00517(PF00665) PF13276(mitochondrial)
716541.ECL_01107(PF00345)ER
716541.ECL_01106(PF00577)ER
716541.ECL_04199++(plastid)
716541.ECL_00205(<)(ER)
716541.ECL_00687(+)PF13276mitochondrial
716541.ECL_00682PF01527 PF13276 (PF13683)
716541.ECL_04607+ER
716541.ECL_01868+(mitochondrial); mitochondrial
716541.ECL_01003+(mitochondrial); mitochondrial
716541.ECL_00520(PF00665)(mitochondrial); (plastid)
716541.ECL_01133(>)ER
716541.ECL_01007(<)ER
716541.ECL_04036(>)ER
716541.ECL_00013+(mitochondrial)
716541.ECL_00019(>)ER
716541.ECL_03795(PF05231)ER
716541.ECL_01653+ER
716541.ECL_01497+ER
716541.ECL_04204(+)(PF00665) PF13276
716541.ECL_01306(PF03796) (PF00772)
716541.ECL_00310(PF03796) (PF00772)
716541.ECL_04944+(ER)
716541.ECL_05011++
716541.ECL_01204(+)(mitochondrial)
716541.ECL_04674+(mitochondrial)
716541.ECL_01508(<)(mitochondrial)
716541.ECL_04509(<)(ER)
716541.ECL_04226+not used
716541.ECL_01218(+)(mitochondrial)
716541.ECL_04364(+)(mitochondrial)
716541.ECL_00586++
716541.ECL_02534+(>)
716541.ECL_00291+(ER); not used
716541.ECL_03572(PF00959)(mitochondrial)
716541.ECL_02296PF01527(mitochondrial); not used
716541.ECL_02964(+)(mitochondrial)
716541.ECL_03583(PF03796) (PF00772)
716541.ECL_02289(PF00665) PF13276
716541.ECL_00452(+)ER
716541.ECL_02424+plastid
716541.ECL_00144(PF00665) PF13276
716541.ECL_03487(+)(PF00665) PF13276
716541.ECL_02772++
716541.ECL_02774(+)(PF00665) PF13276
716541.ECL_02381(PF00345)(ER)
716541.ECL_00708(PF13347)(ER)
716541.ECL_02509+(mitochondrial); not used
716541.ECL_04921(PF00959)(mitochondrial)
716541.ECL_03549+(plastid)
716541.ECL_01717+(plastid)
716541.ECL_00437+(ER)
716541.ECL_00389(+)(PF00665) PF13276
716541.ECL_02711(+)(PF00665) PF13276
716541.ECL_01705(+)(mitochondrial); plastid
716541.ECL_04731+(>)
716541.ECL_00398(PF03796) (PF00772)
716541.ECL_04425+(PF05929)
716541.ECL_03701(PF00665) PF13276
716541.ECL_01605(+)(mitochondrial)
716541.ECL_02936(+)(PF00665) PF13276
716541.ECL_03282++
716541.ECL_00412+(ER)
716541.ECL_03284+plastid
716541.ECL_01356+(plastid)
716541.ECL_01357+(plastid)
716541.ECL_05107(PF13347)(ER)
716541.ECL_02341+(mitochondrial)
716541.ECL_02729+(mitochondrial)
716541.ECL_02238(+)(ER); (mitochondrial)
716541.ECL_02134(PF00665)(mitochondrial)
716541.ECL_03478+(plastid)
716541.ECL_02569(>)(plastid)
716541.ECL_02030(+)mitochondrial
716541.ECL_00753+(plastid)
716541.ECL_02257+(<)
716541.ECL_00215(+)ER
716541.ECL_03665+(mitochondrial)
716541.ECL_00690+(plastid)
716541.ECL_03312(+)ER
716541.ECL_03272(+)(mitochondrial)
716541.ECL_03305+(plastid)
716541.ECL_03304+(plastid)
716541.ECL_02232(+)(mitochondrial)
716541.ECL_05148(<)+
716541.ECL_01247+
716541.ECL_02892+
716541.ECL_04561+
716541.ECL_00657+
716541.ECL_01128+
716541.ECL_04203PF01527
716541.ECL_04201PF01527
716541.ECL_04459(>)
716541.ECL_00222(+)(ER)
716541.ECL_01014+
716541.ECL_01017+
716541.ECL_03929+
716541.ECL_05006(>)
716541.ECL_02474PF01527
716541.ECL_02871+
716541.ECL_01663(>)
716541.ECL_04946+
716541.ECL_03220(+)(plastid)
716541.ECL_00792+
716541.ECL_00796+
716541.ECL_01689(>)
716541.ECL_03967+
716541.ECL_05018PF01527
716541.ECL_04018(+)(>)
716541.ECL_04558+
716541.ECL_02469+
716541.ECL_04462+
716541.ECL_03569+
716541.ECL_01206+
716541.ECL_02085+
716541.ECL_00182(PF13347)
716541.ECL_00106+
716541.ECL_01511+
716541.ECL_03689PF01527
716541.ECL_01699PF01527
716541.ECL_03907(>)
716541.ECL_04176(+)+
716541.ECL_02419(+)(plastid)
716541.ECL_02529+
716541.ECL_00068+
716541.ECL_03279+
716541.ECL_02635+
716541.ECL_02697+
716541.ECL_03695+
716541.ECL_01992+
716541.ECL_02740+
716541.ECL_03347+
716541.ECL_03342+
716541.ECL_03340+
716541.ECL_03208(PF00959)
716541.ECL_03204+
716541.ECL_03541(>)
716541.ECL_03118(+)(ER)
716541.ECL_03116+
716541.ECL_03975(PF01300)
716541.ECL_01044+
716541.ECL_04369(PF00577)
716541.ECL_04528+
716541.ECL_00478+
716541.ECL_04100+
716541.ECL_00580+
716541.ECL_00299+
716541.ECL_01075(>)
716541.ECL_00051+
716541.ECL_04297+
716541.ECL_03590PF01527
716541.ECL_03597+not used
716541.ECL_01535+
716541.ECL_02624+
716541.ECL_01453+
716541.ECL_04979+
716541.ECL_03422+
716541.ECL_00873+
716541.ECL_03575+
716541.ECL_03578(+)(mitochondrial)
716541.ECL_00909(PF13347)
716541.ECL_03218PF01527
716541.ECL_03210PF01527
716541.ECL_03212+
716541.ECL_02290PF01527
716541.ECL_00617(PF13347)
716541.ECL_02966+
716541.ECL_02967+
716541.ECL_00266+
716541.ECL_04370(+)(PF00345)
716541.ECL_04379+
716541.ECL_00461PF01527
716541.ECL_04113+
716541.ECL_03812PF01527
716541.ECL_02433+
716541.ECL_04129+
716541.ECL_00044+
716541.ECL_03743+
716541.ECL_03581PF01527
716541.ECL_04510+
716541.ECL_01522(PF13347)
716541.ECL_01425+
716541.ECL_01422(PF13347)
716541.ECL_04095+
716541.ECL_03564+
716541.ECL_01732(PF01300)
716541.ECL_00911(+)mitochondrial; not used
716541.ECL_00666+not used
716541.ECL_02281PF01527
716541.ECL_02284+
716541.ECL_02992+
716541.ECL_02970+
716541.ECL_02977+
716541.ECL_01461+
716541.ECL_04525+
716541.ECL_00736(+)plastid
716541.ECL_03007+
716541.ECL_00458(>)
716541.ECL_01085+not used
716541.ECL_00145PF01527
716541.ECL_01432+
716541.ECL_03484PF01527
716541.ECL_03480PF01527
716541.ECL_03488PF01527
716541.ECL_02779+
716541.ECL_02775PF01527
716541.ECL_03390(PF05231)
716541.ECL_04765+
716541.ECL_01892(<)
716541.ECL_00921(PF00959)
716541.ECL_03976(PF01300)
716541.ECL_03972(PF01300)
716541.ECL_02160(+)+
716541.ECL_03163(+)+
716541.ECL_03169+
716541.ECL_02384+
716541.ECL_04359(+)(mitochondrial)
716541.ECL_03540(>)
716541.ECL_04422+
716541.ECL_03830(+)(PF00665)
716541.ECL_03941+
716541.ECL_02560+
716541.ECL_02561+
716541.ECL_01545+
716541.ECL_04926+
716541.ECL_03494+
716541.ECL_02709PF01527
716541.ECL_04427+
716541.ECL_04629+
716541.ECL_02175+(mitochondrial)
716541.ECL_00622(+)(plastid)
716541.ECL_02953(<)
716541.ECL_02391(PF13347)
716541.ECL_00710+
716541.ECL_00435+
716541.ECL_00433+
716541.ECL_02095(+)(mitochondrial)
716541.ECL_04386+
716541.ECL_03848(PF16485)
716541.ECL_01392+
716541.ECL_04659(PF01300)
716541.ECL_04655+
716541.ECL_02369+
716541.ECL_04586+
716541.ECL_03714+
716541.ECL_00165PF01527
716541.ECL_01027(>)
716541.ECL_02719+
716541.ECL_02712PF01527
716541.ECL_01703+
716541.ECL_02008+
716541.ECL_03443+
716541.ECL_02142+
716541.ECL_03140PF15636
716541.ECL_00421+
716541.ECL_04429+
716541.ECL_01450+
716541.ECL_00395PF01527
716541.ECL_00390PF01527
716541.ECL_02548+
716541.ECL_03879(>)
716541.ECL_01396+
716541.ECL_03707+
716541.ECL_03706+
716541.ECL_03703PF01527
716541.ECL_01460+
716541.ECL_05118+
716541.ECL_02463+
716541.ECL_01317(+)+
716541.ECL_00235+
716541.ECL_02110+
716541.ECL_04894PF01527
716541.ECL_03521+
716541.ECL_02152(+)(plastid)
716541.ECL_00959+
716541.ECL_04329(>)
716541.ECL_01915+
716541.ECL_02937PF01527
716541.ECL_01822+
716541.ECL_03287(+)(mitochondrial)
716541.ECL_03197+
716541.ECL_03190+
716541.ECL_04415+
716541.ECL_03846(+)(mitochondrial)
716541.ECL_04098+
716541.ECL_03990(>)
716541.ECL_05074+
716541.ECL_04564+
716541.ECL_03737+
716541.ECL_04457+
716541.ECL_02802(+)(ER)
716541.ECL_02024+
716541.ECL_02121+
716541.ECL_03633+
716541.ECL_03462(<)
716541.ECL_02832PF01527
716541.ECL_04646+
716541.ECL_00409+
716541.ECL_00402+
716541.ECL_04710(+)(mitochondrial)
716541.ECL_03188+
716541.ECL_02907+
716541.ECL_03181+
716541.ECL_00572+
716541.ECL_04400+
716541.ECL_01166(>)
716541.ECL_03502+
716541.ECL_04089+
716541.ECL_02648+
716541.ECL_03980+
716541.ECL_01292+
716541.ECL_01291+
716541.ECL_01298+not used
716541.ECL_03027+
716541.ECL_01583(>)
716541.ECL_00199+
716541.ECL_02587PF01527
716541.ECL_03505(+)(plastid)
716541.ECL_03500(+)(mitochondrial)
716541.ECL_01753(+)(>)
716541.ECL_03509(+)(ER)
716541.ECL_02055+
716541.ECL_02135PF01527
716541.ECL_02132PF01527
716541.ECL_02131PF01527
716541.ECL_01623(<)
716541.ECL_02563+
716541.ECL_02037(+)(mitochondrial)
716541.ECL_01933+
716541.ECL_02225(<)
716541.ECL_00757+
716541.ECL_01802+
716541.ECL_01803+
716541.ECL_04551(<)
716541.ECL_01801+
716541.ECL_03267(+)(mitochondrial)
716541.ECL_02919(+)(mitochondrial)
716541.ECL_02251(>)
716541.ECL_00503+not used
716541.ECL_01115PF01527
716541.ECL_03082(>)
716541.ECL_03085+
716541.ECL_03916+
716541.ECL_04050(PF01300)
716541.ECL_00219(+)+
716541.ECL_00211+not used
716541.ECL_00320+
716541.ECL_05023(>)
716541.ECL_01339+
716541.ECL_01335+
716541.ECL_03664+
716541.ECL_00034(+)(ER)
716541.ECL_01240+
716541.ECL_01249+
716541.ECL_04865+
716541.ECL_00694+
716541.ECL_00692+
716541.ECL_02852(PF05929)
716541.ECL_01403+
716541.ECL_03275+
716541.ECL_03529+
716541.ECL_00518PF01527
716541.ECL_04269+
716541.ECL_04518+
716541.ECL_04517+
716541.ECL_04193+
716541.ECL_03923+
716541.ECL_00209(+)(plastid)
716541.ECL_03810+
716541.ECL_00334(<)
716541.ECL_00330(+)+
716541.ECL_01329+
716541.ECL_01322+
716541.ECL_05158(>)
716541.ECL_00197+
716541.ECL_03670+
716541.ECL_00025(>)
716541.ECL_01259+
716541.ECL_03417PF01527
716541.ECL_00686PF01527
716541.ECL_00680(+)(ER)
716541.ECL_01796(+)(plastid)
716541.ECL_00675(PF13347)
716541.ECL_01869+
716541.ECL_02846+
716541.ECL_02845+
716541.ECL_03246(+)(plastid)
716541.ECL_04544+
716541.ECL_00528+
716541.ECL_01715+
716541.ECL_04210PF01527
716541.ECL_03544+
716541.ECL_01009+
716541.ECL_03939(+)+
716541.ECL_00232+
716541.ECL_01319(PF00959)
716541.ECL_02688+
716541.ECL_04598(>)
716541.ECL_01267(+)(<)
716541.ECL_02064PF01527
716541.ECL_02664+
716541.ECL_02275(+)(<)
716541.ECL_00836+
716541.ECL_04410+
716541.ECL_03336(+)(ER)
716541.ECL_01074(>)
716541.ECL_04001(+)(mitochondrial)
716541.ECL_03251(+)
716541.ECL_00784(+)
716541.ECL_01877(+)
716541.ECL_00531(+)
716541.ECL_00223(+)
716541.ECL_04025(+)
716541.ECL_03928(+)
716541.ECL_00315(+)
716541.ECL_00009(+)
716541.ECL_04831(+)
716541.ECL_02557(+)
716541.ECL_00336(+)not used
716541.ECL_03431(+)
716541.ECL_02041(+)
716541.ECL_03327(+)
716541.ECL_00799(+)
716541.ECL_02865(+)
716541.ECL_04305(+)
716541.ECL_04230(+)
716541.ECL_04236(+)
716541.ECL_04542(+)
716541.ECL_02462(+)
716541.ECL_00188(+)
716541.ECL_04330(+)
716541.ECL_01202(+)
716541.ECL_02089(+)
716541.ECL_02087(+)
716541.ECL_01516(+)
716541.ECL_04953(+)
716541.ECL_01855(+)
716541.ECL_00600(+)
716541.ECL_03122(+)
716541.ECL_00489(+)not used
716541.ECL_04174(+)
716541.ECL_02415(+)
716541.ECL_01215(+)
716541.ECL_04818(+)not used
716541.ECL_00118(+)
716541.ECL_01503(+)
716541.ECL_02639(+)
716541.ECL_02632(+)
716541.ECL_02244(+)
716541.ECL_02243(+)
716541.ECL_00801(+)
716541.ECL_05037(+)
716541.ECL_04965(+)
716541.ECL_01756(+)
716541.ECL_00969(+)
716541.ECL_00277(+)
716541.ECL_04106(+)
716541.ECL_02409(+)
716541.ECL_03003(+)
716541.ECL_01194(+)
716541.ECL_00512(+)
716541.ECL_03467(+)
716541.ECL_03650(+)
716541.ECL_03754(+)
716541.ECL_04407(+)
716541.ECL_00127(+)
716541.ECL_00124(+)
716541.ECL_01537(+)
716541.ECL_02622(+)
716541.ECL_02111(+)
716541.ECL_03097(+)
716541.ECL_03300(+)
716541.ECL_03574(+)
716541.ECL_02344(+)
716541.ECL_04701(+)
716541.ECL_02962(+)
716541.ECL_04041(+)
716541.ECL_00269(+)
716541.ECL_02230(+)
716541.ECL_04122(+)
716541.ECL_00468(+)
716541.ECL_00465(+)
716541.ECL_02432(+)
716541.ECL_01186(+)
716541.ECL_02507(+)
716541.ECL_00284(+)
716541.ECL_00048(+)
716541.ECL_03749(+)
716541.ECL_01669(+)not used
716541.ECL_00865+
716541.ECL_01731(+)
716541.ECL_02197(+)
716541.ECL_01883(+)
716541.ECL_03173(+)
716541.ECL_02287(+)
716541.ECL_00406(+)
716541.ECL_02979(+)
716541.ECL_01463(+)
716541.ECL_00739(+)
716541.ECL_04743(+)
716541.ECL_04741(+)
716541.ECL_04345(+)
716541.ECL_00454(+)
716541.ECL_02902(+)
716541.ECL_02903(+)
716541.ECL_03824(+)
716541.ECL_02425(+)
716541.ECL_03828(+)
716541.ECL_03956(+)
716541.ECL_03959(+)
716541.ECL_04522(+)
716541.ECL_02606(+)
716541.ECL_02600(+)
716541.ECL_03777(+)
716541.ECL_02609(+)
716541.ECL_00148(+)not used
716541.ECL_02778(+)
716541.ECL_02143(+)
716541.ECL_03552(+)
716541.ECL_03550(+)
716541.ECL_01894(+)
716541.ECL_02360(+)
716541.ECL_02361(+)
716541.ECL_02161(+)
716541.ECL_04916(+)
716541.ECL_00707(+)
716541.ECL_03011(+)
716541.ECL_04919(+)
716541.ECL_04756(+)
716541.ECL_04064(+)
716541.ECL_01846(+)
716541.ECL_05088(+)
716541.ECL_02567(+)
716541.ECL_01149(+)
716541.ECL_02568(+)
716541.ECL_03800(+)
716541.ECL_03801(+)
716541.ECL_00156(+)
716541.ECL_00155(+)
716541.ECL_01544(+)
716541.ECL_01540(+)
716541.ECL_04929(+)not used
716541.ECL_04925(+)
716541.ECL_03491(+)
716541.ECL_03499(+)
716541.ECL_04097(+)not used
716541.ECL_00848(+)
716541.ECL_00842(+)
716541.ECL_03543(+)
716541.ECL_01711(+)
716541.ECL_02172(+)
716541.ECL_00620(+)
716541.ECL_03151(+)
716541.ECL_04613(+)
716541.ECL_01227(+)
716541.ECL_03986(+)
716541.ECL_02958(+)
716541.ECL_02392(+)
716541.ECL_02395(+)
716541.ECL_03317(+)
716541.ECL_00546(+)
716541.ECL_01067(+)
716541.ECL_00098(+)
716541.ECL_01573(+)
716541.ECL_01570(+)
716541.ECL_03992(+)
716541.ECL_00382(+)
716541.ECL_04802(+)
716541.ECL_03535(+)
716541.ECL_00255(+)
716541.ECL_00947(+)
716541.ECL_00250(+)
716541.ECL_00948(+)
716541.ECL_03302(+)
716541.ECL_03446(+)not used
716541.ECL_01967(+)
716541.ECL_00898(+)
716541.ECL_04014(+)
716541.ECL_02927(+)
716541.ECL_01221(+)
716541.ECL_02814(+)
716541.ECL_04733(+)
716541.ECL_02541(+)
716541.ECL_02546(+)
716541.ECL_02545(+)
716541.ECL_01567(+)
716541.ECL_00377(+)
716541.ECL_00175(+)
716541.ECL_03630(+)
716541.ECL_05091(+)
716541.ECL_02150(+)
716541.ECL_02154(+)
716541.ECL_02745(+)
716541.ECL_01917(+)
716541.ECL_03046(+)
716541.ECL_03049(+)
716541.ECL_02939(+)
716541.ECL_01820+
716541.ECL_01825(+)
716541.ECL_01827(+)
716541.ECL_02805(+)
716541.ECL_04259(+)
716541.ECL_04412(+)
716541.ECL_04413(+)
716541.ECL_04099(+)
716541.ECL_04071(+)
716541.ECL_05070(+)
716541.ECL_04672(+)
716541.ECL_01286(+)
716541.ECL_02555(+)
716541.ECL_03219(+)
716541.ECL_00177(+)
716541.ECL_02496(+)
716541.ECL_01614(+)
716541.ECL_01903(+)
716541.ECL_00740(+)
716541.ECL_02834(+)
716541.ECL_03294(+)
716541.ECL_00408(+)not used
716541.ECL_04080(+)
716541.ECL_03989(+)
716541.ECL_04065(+)not used
716541.ECL_05043(+)
716541.ECL_05041(+)
716541.ECL_01293(+)
716541.ECL_02640(+)
716541.ECL_04585(+)
716541.ECL_01615(+)
716541.ECL_01584(+)not used
716541.ECL_01346(+)
716541.ECL_02901(+)
716541.ECL_01800(+)not used
716541.ECL_00839(+)
716541.ECL_04989(+)
716541.ECL_01856(+)
716541.ECL_04279(+)
716541.ECL_01029(+)
716541.ECL_04505(+)
716541.ECL_05056(+)not used
716541.ECL_04691(+)
716541.ECL_00323(+)
716541.ECL_05128(+)
716541.ECL_00033(+)
716541.ECL_00035(+)
716541.ECL_00393(+)
716541.ECL_02481(+)
716541.ECL_01636(+)
716541.ECL_04376(+)
716541.ECL_00693(+)not used
716541.ECL_02210(+)
716541.ECL_01478(+)
716541.ECL_02855(+)not used
716541.ECL_04288(+)
716541.ECL_03090(+)
716541.ECL_04264(+)
716541.ECL_05159(+)
716541.ECL_05157(+)
716541.ECL_01253(+)
716541.ECL_01467(+)
716541.ECL_02078(+)
716541.ECL_03426(+)
716541.ECL_02489(+)not used
716541.ECL_02674(+)
716541.ECL_01648(+)
716541.ECL_01294(+)
716541.ECL_01482(+)
716541.ECL_03303(+)
716541.ECL_00779(+)
716541.ECL_01865(+)
716541.ECL_04016(+)
716541.ECL_01710(+)
716541.ECL_03546(+)
716541.ECL_05033(+)
716541.ECL_04257(+)
716541.ECL_00043(+)
716541.ECL_02447(+)
716541.ECL_00307(+)
716541.ECL_05147(+)
716541.ECL_05143(+)
716541.ECL_02061(+)not used
716541.ECL_00713(+)
716541.ECL_02666(+)
716541.ECL_02270(+)
716541.ECL_01072(+)not used

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: YES (FDR = 12.5 %)
    Estimated copy number = 0.7 (7/10 KEGG proteins)
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0.0 (0/10 KEGG proteins)
  • Functional Type VI secretion system: YES (FDR = 7.7 %)
    Estimated copy number = 2.25 (18/8 KEGG proteins)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================