Metamenu

Genomes encoding eukaryotic-like proteins

PF13683 Integrase core domain

Copy number in non-pathogens:
Mean=0.52 Stddev=1.51

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bradyrhizobium diazoefficiens s 4 7
Brachyspira pilosicoli WesB s 4 8
Klebsiella pneumoniae s 4 7
Shigella flexneri CCH060 s 4 7
Leptospira interrogans serovar Canicola str. HAI0024 s 4 7
Leptospira weilii str. Ecochallenge s 5 9
Leptospira weilii serovar Topaz str. LT2116 s 5 9
Leptospira interrogans serovar Bataviae str. Swart s 4 7
Leptospira interrogans serovar Bataviae str. Kariadi-Satu s 4 7
Leptospira interrogans str. UT126 s 4 7
Acinetobacter sp. CIP 102082 s 4 7
Leptospira sp. Fiocruz LV4135 s 4 8
Klebsiella pneumoniae MGH 30 s 4 8
Bordetella holmesii ATCC 51541 s 8 14
Bordetella holmesii 30539 s 10 16
Bordetella holmesii 35009 s 9 15
Bordetella holmesii 41130 s 10 17
Bordetella holmesii 70147 s 8 14
Bordetella holmesii 44057 s 10 16
Bordetella holmesii 1058 s 9 15
Frankia sp. CN3 s 6 10
Bradyrhizobium elkanii USDA 76 s 4 8
Methylobacterium extorquens DSM 13060 s 9 15
Piscirickettsia salmonis AUSTRAL-005 s 4 7
Burkholderia pseudomallei Pasteur 52237 s 5 9
Burkholderia mallei PRL-20 s 4 8
Burkholderia mallei 2002721280 s 4 8
Burkholderia mallei ATCC 10399 s 4 8
Leptospira weilii str. 2006001853 s 4 8
Leptospira mayottensis 200901122 s 4 8
Leptospira santarosai str. AIM s 4 8
Leptospira santarosai serovar Shermani str. 1342KT s 4 7
Leptospira santarosai str. ZUN179 s 4 7
Leptospira weilii str. LNT 1234 s 4 7
Leptospira santarosai serovar Arenal str. MAVJ 401 s 4 7
Leptospira santarosai str. CBC523 s 4 7
Leptospira fainei serovar Hurstbridge str. BUT 6 s 4 8
Leptospira weilii str. UI 13098 s 4 8
Leptospira santarosai str. HAI821 s 4 7
Bradyrhizobium elkanii WSM2783 s 4 7
Bradyrhizobium japonicum USDA 135 s 4 7
Burkholderia pseudomallei 305 s 6 10
Leptospira santarosai serovar Shermani str. LT 821 s 4 7
Mycobacterium phlei RIVM601174 s 6 10
Burkholderia pseudomallei 576 s 4 8
Megasphaera sp. BL7 s 4 8
Holospora obtusa F1 s 4 8
Corynebacterium sp. KPL1859 s 4 8
Corynebacterium sp. KPL1855 s 5 9
Corynebacterium sp. KPL1824 s 5 9
Corynebacterium sp. KPL1818 s 4 8
Corynebacterium sp. KPL1814 s 4 7
Frankia sp. EAN1pec s 12 19
Xanthomonas campestris pv. raphani 756C s 5 9
Xanthomonas campestris pv. campestris str. 8004 s 12 19
Burkholderia gladioli BSR3 s 4 7
Burkholderia mallei NCTC 10229 s 4 7
Burkholderia pseudomallei 1710b s 5 9
Burkholderia pseudomallei 1026b s 6 10
Bordetella pertussis H934 s 6 10
Gilliamella apicola s 6 10
Snodgrassella alvi s 5 9
Pantoea ananatis LMG 2665 s 4 7
[Clostridium] lactatifermentans DSM 14214 s 4 7
Burkholderia mallei s 4 7
Burkholderia mallei s 10 17
Burkholderia mallei s 4 8
Burkholderia mallei NCTC 10247 s 7 12
Burkholderia mallei s 14 23
Burkholderia mallei s 9 15
Burkholderia mallei s 5 9
Burkholderia mallei s 6 11
Burkholderia mallei s 30 46
Burkholderia mallei s 28 44
Burkholderia pseudomallei s 4 7
Burkholderia mallei s 4 7
Burkholderia pseudomallei Pasteur 52237 s 4 7
Burkholderia pseudomallei s 4 7
Burkholderia pseudomallei s 4 7
Burkholderia pseudomallei MSHR5855 s 4 8
Burkholderia pseudomallei s 4 8
Burkholderia pseudomallei HBPUB10303a s 4 8
Burkholderia pseudomallei s 4 7
Raoultella planticola s 4 7
Burkholderia mallei s 8 14
Bordetella holmesii F627 s 8 14
Bordetella holmesii H558 s 9 15
Sphingobacterium sp. ML3W s 5 9
Burkholderia mallei s 4 7
Piscirickettsia salmonis s 4 7
Burkholderia mallei s 8 13
Burkholderia pseudomallei 1026b s 4 7
Burkholderia mallei s 5 9
Burkholderia mallei s 11 18
Corynebacterium propinquum s 4 7
Burkholderia mallei s 4 7
Burkholderia pseudomallei s 6 11
Burkholderia pseudomallei s 6 10
Burkholderia cepacia s 4 7
Burkholderia cepacia s 4 8
Burkholderia cepacia s 4 7
Burkholderia pseudomallei s 4 7
Pantoea ananatis s 6 11
Klebsiella pneumoniae s 4 7
Klebsiella pneumoniae s 4 7
Acinetobacter baumannii s 4 8
Piscirickettsia salmonis s 4 7
Piscirickettsia salmonis s 5 9
Piscirickettsia salmonis s 4 8
Piscirickettsia salmonis s 4 7
Piscirickettsia salmonis s 4 7
Piscirickettsia salmonis s 4 7
Piscirickettsia salmonis s 4 7
Piscirickettsia salmonis s 4 7
Piscirickettsia salmonis s 4 7
Piscirickettsia salmonis s 4 7
Piscirickettsia salmonis s 4 8
Hymenobacter sp. PAMC 26628 s 5 9
Mycobacterium mucogenicum s 4 7
Paracoccus yeei s 4 8
Pantoea agglomerans pv. betae s 4 7
Gilliamella apicola s 4 7
Gilliamella apicola s 11 18
Gilliamella apicola s 5 9
Gilliamella apicola s 7 12
Gilliamella apicola s 8 13
Gilliamella apicola s 4 7
Gilliamella apicola s 8 13
Gilliamella apicola s 4 7
Gilliamella apicola s 8 13
Gilliamella apicola s 10 17
Gilliamella apicola s 6 10
Gilliamella apicola s 11 18
Gilliamella apicola s 9 15
Gilliamella apicola s 10 16
Gilliamella apicola s 6 10
Gilliamella apicola s 6 11
Gilliamella apicola s 4 8
Gilliamella apicola s 4 7
Gilliamella apicola s 6 11
Bordetella holmesii s 9 15
Burkholderia pseudomallei s 4 8
Burkholderia pseudomallei s 4 8
Burkholderia mallei s 5 9
Lentzea albidocapillata s 4 7
Burkholderia pseudomallei s 5 9
Streptomyces rhizosphaericus s 6 10
Mycobacterium kansasii s 4 7
Francisella halioticida s 5 9
Enterobacter cloacae subsp. cloacae ATCC 13047 s 7 12
Burkholderia mallei ATCC 23344 s 59 90
Xanthomonas campestris pv. campestris str. ATCC 33913 s 12 19

*p=pathogen;s=symbiont