Metamenu

Effective results for Streptomyces sviceus ATCC 29083 (eggnog40)

Summary

Number of putative secreted proteins: 412
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 69 eukaryotic-like domains, contained in 412 proteins (49 high, 363 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
463191.SSEG_02003(PF00331) PF03664 PF14200ER
463191.SSEG_01187(PF13363) (PF13364) (PF10435) (PF01301)
463191.SSEG_05390(PF00150) (PF00553)ER
463191.SSEG_01882(PF01095) (PF00544)(ER)
463191.SSEG_00405(PF01095) (PF00544)ER
463191.SSEG_07479(PF16499) (PF00652)mitochondrial; (ER)
463191.SSEG_03085(PF03442) (PF00150)mitochondrial; (mitochondrial)
463191.SSEG_06666(PF00553) (PF01341)ER
463191.SSEG_06665(PF00150) (PF00553)ER; (ER)
463191.SSEG_04664(PF02868) (PF01447)mitochondrial; ER
463191.SSEG_04665(PF00652) PF03664ER
463191.SSEG_06997PF09206 PF14200ER
463191.SSEG_04606(PF00652) (PF01120)mitochondrial; (mitochondrial)
463191.SSEG_06485(PF00331) PF03664ER
463191.SSEG_06483(PF16499) (PF00652)ER
463191.SSEG_01025(PF00652) PF03664ER
463191.SSEG_03557(PF02868) (PF01447)mitochondrial
463191.SSEG_01374(PF00652) (PF00331)mitochondrial
463191.SSEG_06575(PF00652) PF03664mitochondrial
463191.SSEG_06572PF05270 PF09206(ER); (plastid)
463191.SSEG_02059(PF00652) PF03664ER
463191.SSEG_05602(PF00150) (PF00553)ER
463191.SSEG_06739(PF00652) PF03664ER
463191.SSEG_04659(PF03442) (PF00150)ER
463191.SSEG_04651(PF16499) (PF00652)ER
463191.SSEG_04650(PF00652) PF09206(mitochondrial); plastid
463191.SSEG_04652(PF00652) PF09206mitochondrial
463191.SSEG_04655(PF01120) PF14200mitochondrial
463191.SSEG_04654PF02057 (PF00652)(mitochondrial); plastid
463191.SSEG_01365(PF01341) (PF00553)ER
463191.SSEG_01362(PF01670) (PF00553)ER
463191.SSEG_02184(PF00150) PF14200(mitochondrial)
463191.SSEG_10436(PF01120) PF14200(mitochondrial)
463191.SSEG_08418(PF02868) (PF01447)mitochondrial
463191.SSEG_06049PF03664 PF14200(ER)
463191.SSEG_03937(PF13560)(mitochondrial)
463191.SSEG_10539(PF01510)(ER)
463191.SSEG_09777(PF03644)ER
463191.SSEG_03910(PF01670)ER
463191.SSEG_10515(PF16499)ER
463191.SSEG_08807(PF00652)ER
463191.SSEG_05659(PF01510)(ER)
463191.SSEG_03643(PF13363) (PF13364) (PF01301)
463191.SSEG_05392(PF00553)mitochondrial
463191.SSEG_05391(PF00553)ER
463191.SSEG_04144(PF02868) (PF01447)(plastid)
463191.SSEG_06836(PF00150)mitochondrial; (mitochondrial)
463191.SSEG_02063PF05270ER
463191.SSEG_08656(PF13560)(mitochondrial)
463191.SSEG_10059(PF02945)(mitochondrial)
463191.SSEG_05583(PF01120)ER
463191.SSEG_07459(PF02983)mitochondrial
463191.SSEG_02005PF14200(mitochondrial)
463191.SSEG_05356(PF00331)ER
463191.SSEG_05131(PF02983)(mitochondrial)
463191.SSEG_05134(PF02983)(mitochondrial)
463191.SSEG_03166PF05270(mitochondrial); plastid
463191.SSEG_03165PF14200ER
463191.SSEG_03081(PF00652) (PF00150)plastid
463191.SSEG_09903(PF02983)ER
463191.SSEG_03317(PF01510)ER
463191.SSEG_06663(PF00553)ER
463191.SSEG_06664(PF00553)ER
463191.SSEG_04648(PF00652)ER
463191.SSEG_04646(PF00652) PF09206(mitochondrial)
463191.SSEG_08159(PF07228)(mitochondrial)
463191.SSEG_07012(PF00553)ER
463191.SSEG_07011(PF00544)(mitochondrial)
463191.SSEG_04121(PF13560)(mitochondrial)
463191.SSEG_03770PF02057mitochondrial
463191.SSEG_07634(PF07228)mitochondrial; (mitochondrial)
463191.SSEG_05474(PF05630)mitochondrial; (mitochondrial)
463191.SSEG_00311(PF01433)ER
463191.SSEG_01019(PF01341)mitochondrial; (mitochondrial)
463191.SSEG_02894(PF01872)ER; (ER)
463191.SSEG_08203(PF02983)ER
463191.SSEG_08209(PF07228)(mitochondrial)
463191.SSEG_00789(PF01510)(mitochondrial)
463191.SSEG_08784(PF01095)(ER)
463191.SSEG_01223(PF01872)(ER)
463191.SSEG_01220PF14200ER
463191.SSEG_04280(PF14378)ER
463191.SSEG_06573PF05270ER
463191.SSEG_07485(PF00150)ER
463191.SSEG_10508(PF01433)ER
463191.SSEG_02265(PF00652)mitochondrial
463191.SSEG_04736(PF05630)ER
463191.SSEG_04734(PF00652)mitochondrial
463191.SSEG_04735(PF00652)ER
463191.SSEG_02071(PF07228)mitochondrial; (mitochondrial)
463191.SSEG_00604(PF02868) (PF01447)(ER)
463191.SSEG_10567(PF13560)mitochondrial
463191.SSEG_01891(PF03767)(ER)
463191.SSEG_04500(PF13560)mitochondrial
463191.SSEG_06456(PF00652)ER
463191.SSEG_07271(PF16499)mitochondrial
463191.SSEG_04776(PF13560)(mitochondrial)
463191.SSEG_11085(PF01872)ER
463191.SSEG_00470(PF08376)ER
463191.SSEG_06737(PF02018)ER
463191.SSEG_04346PF12222mitochondrial
463191.SSEG_04345PF14200(ER); ER
463191.SSEG_06476PF05270ER
463191.SSEG_01328(PF13602)mitochondrial
463191.SSEG_02413(PF01120) (PF16757) PF14200
463191.SSEG_03098PF05270ER
463191.SSEG_03892(PF02018)ER
463191.SSEG_04811(PF02018)mitochondrial; (mitochondrial)
463191.SSEG_06411(PF02018)ER
463191.SSEG_07232(PF07228)(ER)
463191.SSEG_07231(PF16483)(mitochondrial)
463191.SSEG_04653PF14200ER
463191.SSEG_04656(PF00652)ER
463191.SSEG_00687(PF00553)ER
463191.SSEG_01363(PF00553)(ER)
463191.SSEG_01951PF14686 (PF14683) PF09284
463191.SSEG_02846(PF00553)ER
463191.SSEG_05537(PF01433)ER
463191.SSEG_02473(PF01433)mitochondrial
463191.SSEG_02289(PF03457)ER; (ER)
463191.SSEG_06580(PF05547)ER
463191.SSEG_04405(PF13560)mitochondrial
463191.SSEG_04151(PF01255)mitochondrial
463191.SSEG_00120(PF13560)mitochondrial
463191.SSEG_06273(PF00150)ER
463191.SSEG_06272PF14686 (PF14683) PF09284
463191.SSEG_02379(PF02018)ER
463191.SSEG_11196(PF08376)ER
463191.SSEG_08183(PF13374)(mitochondrial)
463191.SSEG_06521(PF13560)mitochondrial; (mitochondrial)
463191.SSEG_01215(PF01120) (PF16757)
463191.SSEG_03211(PF13602)(mitochondrial)
463191.SSEG_01184PF14200(mitochondrial)
463191.SSEG_03278(PF13560)(mitochondrial)
463191.SSEG_01255(PF16483)(mitochondrial)
463191.SSEG_00870(PF02156)(plastid)
463191.SSEG_03164(PF01120) PF14200
463191.SSEG_04741(PF01000) (PF01193)
463191.SSEG_10695(PF01341)plastid
463191.SSEG_05337(PF08376)(mitochondrial)
463191.SSEG_09121(PF05336)(mitochondrial)
463191.SSEG_04649(PF00331) PF14200
463191.SSEG_08540(PF13560)(mitochondrial)
463191.SSEG_07778PF12222(plastid)
463191.SSEG_04126(PF02868) (PF01447)
463191.SSEG_00354(PF07228)plastid
463191.SSEG_02600(PF07228)(ER)
463191.SSEG_04609(PF01120) PF14200
463191.SSEG_07537(PF13560)plastid
463191.SSEG_07530(PF13374)(plastid)
463191.SSEG_07205(PF01419)plastid
463191.SSEG_06058(PF07228)(ER)
463191.SSEG_01939(PF13560)(mitochondrial)
463191.SSEG_01483(PF01000) (PF01193)
463191.SSEG_04950(PF13560)(mitochondrial)
463191.SSEG_01098(PF05547)(mitochondrial)
463191.SSEG_02414(PF01120) PF14200
463191.SSEG_08539(PF07646)(mitochondrial)
463191.SSEG_00490(PF08376)(mitochondrial)
463191.SSEG_04858(PF14124)(plastid)
463191.SSEG_05704(PF10009)(plastid)
463191.SSEG_01382(PF01197)(ER)
463191.SSEG_06046(PF00652) PF09206
463191.SSEG_06047(PF01120) PF14200
463191.SSEG_02318(PF13374)(mitochondrial)
463191.SSEG_02317(PF13560)(mitochondrial)
463191.SSEG_00220(PF00150) (PF00553)
463191.SSEG_02559(PF01872)
463191.SSEG_02339(PF13560)
463191.SSEG_03060(PF10009)
463191.SSEG_06971(PF13560)
463191.SSEG_01968(PF00652)
463191.SSEG_09776(PF00150)
463191.SSEG_07350(PF00723)
463191.SSEG_09549(PF01301)
463191.SSEG_00792(PF02148)
463191.SSEG_11342(PF00553)not used
463191.SSEG_11349(PF13602)
463191.SSEG_04921(PF13602)
463191.SSEG_04929(PF07228)
463191.SSEG_06564(PF01510)
463191.SSEG_03669(PF03259)
463191.SSEG_00469(PF03259)
463191.SSEG_08581(PF13560)
463191.SSEG_08580(PF13560)
463191.SSEG_09984PF14200
463191.SSEG_09988(PF03259)
463191.SSEG_03490(PF13602)
463191.SSEG_04721(PF13602)
463191.SSEG_01755(PF13560)
463191.SSEG_05090(PF12862)
463191.SSEG_02048(PF13560)
463191.SSEG_10577(PF13602)
463191.SSEG_10536(PF07228)
463191.SSEG_09349(PF02449)
463191.SSEG_04700(PF05336)
463191.SSEG_01887(PF01095)not used
463191.SSEG_01886(PF00544)
463191.SSEG_02060PF14200
463191.SSEG_04397(PF01197)
463191.SSEG_10229(PF13560)
463191.SSEG_11094(PF03259)
463191.SSEG_11093(PF08376)
463191.SSEG_03603(PF04539)
463191.SSEG_06440(PF13602)
463191.SSEG_08712(PF13560)
463191.SSEG_09108(PF13374)
463191.SSEG_07653(PF07228)
463191.SSEG_06974(PF01255)
463191.SSEG_06300PF05270
463191.SSEG_00976(PF02449)
463191.SSEG_10824(PF13560)
463191.SSEG_04532(PF01433)
463191.SSEG_10480(PF07228)
463191.SSEG_06462(PF07228)
463191.SSEG_07225(PF13560)
463191.SSEG_09908(PF01872)
463191.SSEG_03148PF09206
463191.SSEG_04157(PF03259)
463191.SSEG_05674(PF14378)
463191.SSEG_05670(PF01872)
463191.SSEG_09029(PF12051)
463191.SSEG_08794(PF13602)
463191.SSEG_00217(PF13602)
463191.SSEG_02941(PF13374)
463191.SSEG_06405(PF00652)
463191.SSEG_08528(PF14378)
463191.SSEG_01807(PF05547)
463191.SSEG_10659(PF13560)
463191.SSEG_02424(PF03803)
463191.SSEG_03849(PF04539)
463191.SSEG_04642(PF13602)
463191.SSEG_04647PF14200
463191.SSEG_10901(PF01872)
463191.SSEG_11246(PF04539)
463191.SSEG_07591(PF01255)
463191.SSEG_08301(PF13602)
463191.SSEG_08300(PF13560)
463191.SSEG_04452(PF03767)
463191.SSEG_06416(PF00652)
463191.SSEG_02652(PF10009)
463191.SSEG_10636(PF03259)
463191.SSEG_10637(PF08376)
463191.SSEG_10632(PF03259)
463191.SSEG_02443(PF01896)
463191.SSEG_10172(PF13560)
463191.SSEG_07716(PF13560)
463191.SSEG_08360(PF01872)
463191.SSEG_04165(PF07228)
463191.SSEG_09930(PF01433)
463191.SSEG_06387(PF02983)
463191.SSEG_08971(PF13560)
463191.SSEG_10405(PF02449)
463191.SSEG_10364(PF07228)
463191.SSEG_10366(PF07228)
463191.SSEG_10367(PF07228)not used
463191.SSEG_01399(PF13560)
463191.SSEG_01463(PF00652)
463191.SSEG_01836(PF13374)
463191.SSEG_01837PF05270
463191.SSEG_04623(PF07228)
463191.SSEG_04086(PF07228)
463191.SSEG_00258(PF13374)
463191.SSEG_10422PF05270
463191.SSEG_05288(PF03767)
463191.SSEG_05686(PF07228)
463191.SSEG_00704(PF01197)
463191.SSEG_08937(PF14378)
463191.SSEG_02354(PF13560)
463191.SSEG_00094(PF01510)
463191.SSEG_00099(PF13560)
463191.SSEG_07206PF05270
463191.SSEG_01051(PF01872)
463191.SSEG_10446(PF13602)
463191.SSEG_10115(PF01872)
463191.SSEG_09274(PF13560)
463191.SSEG_08894(PF13560)
463191.SSEG_03985(PF03259)
463191.SSEG_10323(PF13560)
463191.SSEG_10858(PF13560)
463191.SSEG_09591(PF14124)
463191.SSEG_02569(PF13560)
463191.SSEG_02306(PF03457)
463191.SSEG_08058(PF03259)
463191.SSEG_01958(PF13560)
463191.SSEG_10382(PF02148)
463191.SSEG_03220(PF02156)
463191.SSEG_06532(PF01872)
463191.SSEG_06536(PF04539)
463191.SSEG_07116(PF07228)not used
463191.SSEG_02329(PF13560)
463191.SSEG_04490(PF07228)
463191.SSEG_00558(PF01510)
463191.SSEG_09550(PF01301)
463191.SSEG_09556(PF07228)
463191.SSEG_05204(PF07228)
463191.SSEG_06554(PF07228)
463191.SSEG_00570(PF01433)
463191.SSEG_10527(PF16715)
463191.SSEG_01190(PF01872)
463191.SSEG_09767(PF03894)
463191.SSEG_09997(PF13374)
463191.SSEG_08225(PF07228)
463191.SSEG_05887(PF04539)
463191.SSEG_04281(PF13560)
463191.SSEG_09686(PF01896)
463191.SSEG_05086(PF00723)
463191.SSEG_06751(PF07228)
463191.SSEG_04933(PF14216)
463191.SSEG_08811(PF00553)not used
463191.SSEG_04546(PF01433)
463191.SSEG_03382(PF13560)
463191.SSEG_04568(PF07228)
463191.SSEG_11160(PF01433)
463191.SSEG_02717(PF02156)
463191.SSEG_11319(PF07228)
463191.SSEG_11313(PF07228)
463191.SSEG_04975(PF07228)
463191.SSEG_04976(PF07228)
463191.SSEG_05625(PF02449)
463191.SSEG_07199(PF07228)not used
463191.SSEG_04143(PF01255)
463191.SSEG_02016(PF13560)
463191.SSEG_09706(PF05336)
463191.SSEG_10548(PF03894)
463191.SSEG_10547(PF03894)
463191.SSEG_11087(PF07228)
463191.SSEG_01708(PF01433)
463191.SSEG_05825(PF00723)
463191.SSEG_10681(PF00652)
463191.SSEG_11339(PF07228)
463191.SSEG_08645(PF02148)
463191.SSEG_09074(PF02449)
463191.SSEG_02967(PF04539)
463191.SSEG_02966(PF04539)
463191.SSEG_08099(PF01872)
463191.SSEG_10211(PF00723)
463191.SSEG_02753(PF13560)
463191.SSEG_00981(PF00553)
463191.SSEG_07794(PF07228)
463191.SSEG_10002(PF00070)
463191.SSEG_06867(PF00723)
463191.SSEG_03096(PF01872)
463191.SSEG_06673(PF01120)
463191.SSEG_06674(PF16499)
463191.SSEG_06413(PF07228)
463191.SSEG_05682(PF01872)
463191.SSEG_07423(PF13560)
463191.SSEG_05306(PF07228)
463191.SSEG_06658(PF13560)
463191.SSEG_06656(PF13560)
463191.SSEG_04871(PF13560)
463191.SSEG_08337(PF13560)
463191.SSEG_08335(PF01872)
463191.SSEG_00497(PF03259)
463191.SSEG_00496(PF08376)
463191.SSEG_00492(PF03259)
463191.SSEG_10627(PF01197)
463191.SSEG_01366(PF08376)
463191.SSEG_06079(PF02449)
463191.SSEG_06359(PF13602)
463191.SSEG_06351(PF13560)
463191.SSEG_02186(PF00652)
463191.SSEG_03586(PF07228)
463191.SSEG_04857(PF14124)
463191.SSEG_08163(PF07228)
463191.SSEG_05724(PF01510)
463191.SSEG_04112(PF13560)
463191.SSEG_11006(PF00652)
463191.SSEG_10602(PF07228)
463191.SSEG_06374(PF05547)
463191.SSEG_06370(PF13374)
463191.SSEG_06373(PF13560)
463191.SSEG_07393(PF13602)
463191.SSEG_09522(PF05336)
463191.SSEG_06617(PF10009)
463191.SSEG_03221(PF13602)
463191.SSEG_06942(PF13560)
463191.SSEG_07540(PF03457)
463191.SSEG_00124(PF13560)
463191.SSEG_09402(PF13560)
463191.SSEG_10316(PF03259)
463191.SSEG_01476(PF02156)
463191.SSEG_03296(PF00777)
463191.SSEG_09264(PF13560)
463191.SSEG_03994(PF04539)
463191.SSEG_10842(PF13560)
463191.SSEG_10844(PF14378)
463191.SSEG_00085(PF00723)
463191.SSEG_10105(PF01301)
463191.SSEG_02596(PF00544)
463191.SSEG_01704(PF01301)
463191.SSEG_02378(PF01120)
463191.SSEG_03974(PF13560)
463191.SSEG_08064(PF03259)
463191.SSEG_06045(PF00652)
463191.SSEG_06048PF02057
463191.SSEG_08473(PF04539)
463191.SSEG_05462(PF04539)
463191.SSEG_03566(PF04539)
463191.SSEG_04032(PF01510)
463191.SSEG_00065(PF04539)
463191.SSEG_11295(PF07228)
463191.SSEG_05255(PF07228)not used
463191.SSEG_06784(PF13560)
463191.SSEG_06786(PF04539)
463191.SSEG_07789(PF07228)
463191.SSEG_04272(PF12051)
463191.SSEG_03042(PF13374)
463191.SSEG_05441(PF04539)
463191.SSEG_04273(PF07228)
463191.SSEG_04279(PF13560)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================