Metamenu

Genomes encoding eukaryotic-like proteins

PF12051 Protein of unknown function (DUF3533)

Copy number in non-pathogens:
Mean=0.16 Stddev=0.45

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Nocardia africana NBRC 100379 s 4 2
Nocardia anaemiae NBRC 100462 s 8 4
Nocardia yamanashiensis NBRC 100130 s 4 2
Streptomyces turgidiscabies s 4 2
Streptomyces acidiscabies s 6 3
Streptomyces acidiscabies s 6 3
Nocardia arthritidis NBRC 100137 s 6 3
Nocardia crassostreae s 4 2
Nocardia inohanensis NBRC 100128 s 4 2
Nocardia mikamii NBRC 108933 s 4 2
Nocardia niwae NBRC 108934 = DSM 45340 s 6 3
Nocardia puris NBRC 108233 s 4 2
Nocardia asiatica NBRC 100129 s 8 4
Nocardia niigatensis NBRC 100131 s 8 4
Nocardia araoensis NBRC 100135 s 6 3
Nocardia pneumoniae NBRC 100136 s 4 2
Nocardia abscessus NBRC 100374 s 8 4
Nocardia aobensis NBRC 100429 s 4 2
Nocardia concava NBRC 100430 s 6 3
Nocardia exalbida NBRC 100660 s 6 3
Nocardia tenerifensis NBRC 101015 s 4 2
Nocardia otitidiscaviarum NBRC 14405 s 8 4
Bifidobacterium dentium s 4 2
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 s 4 2
Bifidobacterium adolescentis ATCC 15703 s 4 2
Bacillus cereus s 4 2
Bacillus cereus s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Paeniclostridium sordellii s 4 2
Clostridium senegalense JC122 s 4 2
Gorillibacterium massiliense s 6 3
Bifidobacterium pseudocatenulatum s 4 2
Roseburia intestinalis s 4 2
Bifidobacterium dentium ATCC 27678 s 4 2
Paenibacillus sp. HGF5 s 4 2
Bifidobacterium dentium ATCC 27679 s 4 2
Bifidobacterium adolescentis L2-32 s 4 2
Enterococcus gilvus ATCC BAA-350 s 4 2
Enterorhabdus caecimuris B7 s 4 2
Lactobacillus parabrevis ATCC 53295 s 4 2
Streptomyces turgidiscabies Car8 s 4 2
Paenibacillus massiliensis 2301065 = DSM 16942 s 4 2
Lactobacillus parabrevis ATCC 53295 s 4 2
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 s 4 2
Clostridium sp. 7_2_43FAA s 4 2
Enterococcus gilvus ATCC BAA-350 s 4 2
Leuconostoc mesenteroides subsp. mesenteroides J18 s 4 2
Bifidobacterium dentium Bd1 s 4 2
Mycobacterium kansasii ATCC 12478 s 6 3
Nocardia brasiliensis ATCC 700358 p 4 2
Roseburia hominis A2-183 s 4 2
Nocardia nova SH22a s 6 3
Streptomyces brasiliensis s 4 2
Kitasatospora arboriphila s 4 2
Microbispora sp. NRRL B-24597 s 4 2
Bacillus megaterium s 6 3
Mycobacterium kansasii s 6 3
Pseudobutyrivibrio sp. LB2011 s 4 2
Terribacillus aidingensis s 4 2
Streptomyces acidiscabies s 4 2
Clostridium lundense DSM 17049 s 4 2
Clostridium tyrobutyricum s 4 2
Clostridium tyrobutyricum s 4 2
Bacillus cereus s 6 3
Bacillus cereus s 4 2
Actinoalloteichus hymeniacidonis s 4 2
Streptomyces sp. KE1 s 4 2
Bacillus megaterium s 6 3
Mycobacterium conspicuum s 4 2
Mycobacterium saskatchewanense s 4 2
Mycobacterium shimoidei s 4 2
Bifidobacterium adolescentis s 4 2
Bacillus mycoides s 4 2
Bacillus megaterium s 8 4
Bacillus megaterium s 4 2
Mycobacterium kansasii s 4 2
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 6 3
Bacillus thuringiensis s 4 2
Streptomyces acidiscabies s 6 3
Streptomyces acidiscabies s 4 2
Streptomyces acidiscabies s 6 3
Streptomyces acidiscabies s 6 3
Nocardia seriolae s 4 2
Nocardia seriolae s 4 2
Lactobacillus reuteri s 4 2
Lactobacillus reuteri s 4 2
Lactobacillus reuteri s 4 2
Lactobacillus reuteri s 4 2
Lactobacillus reuteri s 4 2
Rhodococcus triatomae s 4 2
Mycobacterium shimoidei s 4 2
Mycobacterium malmoense s 4 2
Mycobacterium branderi s 4 2
Mycobacterium malmoense s 4 2
Bacillus megaterium s 4 2
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 4 2
Nocardia seriolae s 4 2
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 6 3
Mycobacterium kansasii s 6 3
Bifidobacterium dentium s 4 2
Lactobacillus brevis s 4 2

*p=pathogen;s=symbiont