Metamenu

Effective results for Pelotomaculum thermopropionicum SI (eggnog40)

Summary

Number of putative secreted proteins: 88
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 24 eukaryotic-like domains, contained in 88 proteins (4 high, 84 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
370438.PTH_2318(PF03306)ER
370438.PTH_2555(PF06245)(mitochondrial)
370438.PTH_1494(PF14330)mitochondrial
370438.PTH_1128(PF09419)ER
370438.PTH_0196(PF16983)ER
370438.PTH_2363(PF04775)ER
370438.PTH_2358(PF03306)ER
370438.PTH_0216(PF01555)(mitochondrial)
370438.PTH_0597(PF00766) (PF01012)
370438.PTH_2431(PF00766) (PF01012)
370438.PTH_0017(PF00766) (PF01012)
370438.PTH_1751(PF07085)(mitochondrial)
370438.PTH_1767(PF00766) (PF01012)
370438.PTH_1553(PF00766) (PF01012)
370438.PTH_2002(PF00766) (PF01012)
370438.PTH_1904(PF05598)
370438.PTH_2010(PF02256)
370438.PTH_1695(PF10609)
370438.PTH_0478(PF13237)
370438.PTH_2658(PF02899)
370438.PTH_2338(PF04775)
370438.PTH_1912(PF02899)
370438.PTH_2667(PF01555)
370438.PTH_1523(PF01555)
370438.PTH_2317(PF03306)
370438.PTH_0151(PF01555)
370438.PTH_0754(PF05598)
370438.PTH_0984(PF06968)
370438.PTH_1432(PF02899)
370438.PTH_2451(PF02899)
370438.PTH_1508(PF07085)
370438.PTH_0213(PF02899)
370438.PTH_2201(PF05598)
370438.PTH_2516PF16760
370438.PTH_1354(PF05598)
370438.PTH_2441(PF13020)
370438.PTH_1248(PF02899)
370438.PTH_2187(PF05598)
370438.PTH_2432(PF01012)
370438.PTH_0587(PF10609)
370438.PTH_0908(PF13237)
370438.PTH_0909(PF03951)
370438.PTH_0165(PF02178)
370438.PTH_0756(PF01555)
370438.PTH_0019(PF13237)
370438.PTH_0016(PF01012)
370438.PTH_0715(PF01555)
370438.PTH_1377(PF02256)
370438.PTH_0392(PF05598)
370438.PTH_2236(PF07085)
370438.PTH_1407(PF04432)
370438.PTH_1765(PF13237)
370438.PTH_2144(PF01555)
370438.PTH_1768(PF01012)
370438.PTH_2410(PF05598)
370438.PTH_2414(PF02899)
370438.PTH_0491(PF07085)
370438.PTH_0388(PF05598)
370438.PTH_2556(PF06245)
370438.PTH_1552(PF01012)
370438.PTH_0731(PF03951)
370438.PTH_0733(PF03951)
370438.PTH_0600(PF01012)
370438.PTH_0049(PF03951)
370438.PTH_1492(PF04432)
370438.PTH_0728(PF03951)
370438.PTH_0723(PF02171)
370438.PTH_1123(PF01555)
370438.PTH_2571(PF05598)
370438.PTH_2026(PF05598)
370438.PTH_0668(PF02256)
370438.PTH_2295(PF02899)
370438.PTH_0521(PF06968)
370438.PTH_0456PF14712
370438.PTH_2635(PF10609)
370438.PTH_2630(PF01969)
370438.PTH_0858(PF13020)
370438.PTH_0983(PF06968)
370438.PTH_1210(PF02899)
370438.PTH_1213(PF05598)
370438.PTH_2911(PF01969)
370438.PTH_2137(PF05598)
370438.PTH_1938PF16760
370438.PTH_0514(PF01012)
370438.PTH_2001(PF01012)
370438.PTH_1410(PF13237)
370438.PTH_0641(PF06968)
370438.PTH_2901PF16760

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================