Effective results for Thermodesulfatator indicus DSM 15286 (eggnog40)

Summary

Number of putative secreted proteins: 50
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 15 eukaryotic-like domains, contained in 50 proteins (2 high, 48 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
667014.Thein_0858(PF01535)ER
667014.Thein_1070(PF03266)mitochondrial
667014.Thein_1741(PF14885)ER
667014.Thein_1843PF07998ER
667014.Thein_2014(PF10143)ER
667014.Thein_1214(PF00731)(mitochondrial)
667014.Thein_2222(PF00037)ER
667014.Thein_0748(PF00037)(ER)
667014.Thein_1323(PF01875)(mitochondrial)
667014.Thein_2043(PF00037)(plastid)
667014.Thein_2107(PF00037)
667014.Thein_2112PF07998
667014.Thein_0426(PF02371)
667014.Thein_0857(PF02371)
667014.Thein_0679(PF02371)
667014.Thein_0840(PF02527)
667014.Thein_1824(PF00037)
667014.Thein_1624(PF00037)
667014.Thein_1535(PF00684)
667014.Thein_0472(PF00731)
667014.Thein_0495(PF02256)
667014.Thein_0497(PF02256)
667014.Thein_0498(PF00037)
667014.Thein_0009(PF00684)
667014.Thein_0468(PF00037)
667014.Thein_0469(PF00037)
667014.Thein_0803(PF01875)
667014.Thein_2069(PF00037)
667014.Thein_0245(PF11969)
667014.Thein_1195(PF02527)
667014.Thein_0346(PF00684)
667014.Thein_0234(PF02371)
667014.Thein_1366(PF02256)
667014.Thein_1749(PF02371)
667014.Thein_2044(PF00037)
667014.Thein_0911(PF02371)
667014.Thein_0778(PF05189)
667014.Thein_0717(PF02371)
667014.Thein_0781(PF02371)
667014.Thein_1764(PF02371)
667014.Thein_0045(PF00731)
667014.Thein_0200(PF10143)
667014.Thein_2233(PF02371)
667014.Thein_0306(PF00037)
667014.Thein_0099(PF02371)
667014.Thein_2175(PF02371)
667014.Thein_0408(PF00025)
667014.Thein_0404(PF00037)
667014.Thein_0082(PF02371)
667014.Thein_1040(PF00037)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================