Metamenu

Genomes encoding eukaryotic-like proteins

PF02371 Transposase IS116/IS110/IS902 family

Copy number in non-pathogens:
Mean=1.27 Stddev=2.14

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Escherichia coli O104:H4 str. 2011C-3493 s 5 13
Paraburkholderia mimosarum LMG 23256 = NBRC 106338 s 5 14
Bradyrhizobium diazoefficiens s 8 20
Mesorhizobium loti MAFF303099 s 5 13
Yersinia enterocolitica subsp. palearctica Y11 s 5 12
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 s 4 11
Xenorhabdus nematophila ATCC 19061 s 8 19
Yersinia enterocolitica IP 10393 s 4 11
Streptococcus gallolyticus s 5 14
Escherichia coli O26:H11 s 4 10
Yersinia enterocolitica (type O:5,27) str. YE149/02 s 4 10
Yersinia enterocolitica (type O:3) str. YE12/03 s 5 12
Methylobacterium nodulans ORS 2060 s 7 17
Kutzneria sp. 744 s 4 10
Shigella flexneri CCH060 s 4 10
Shigella sonnei 4822-66 s 4 10
[Clostridium] clostridioforme WAL-7855 s 4 10
Mycobacterium parascrofulaceum ATCC BAA-614 s 5 12
Collinsella aerofaciens ATCC 25986 s 5 13
Shigella dysenteriae 225-75 s 5 13
Burkholderia sp. BT03 s 9 22
Mycobacterium chimaera s 4 10
Lachnospiraceae bacterium A4 s 5 14
Lachnospiraceae bacterium A2 s 6 16
Eubacterium plexicaudatum ASF492 s 4 10
Cupriavidus sp. UYPR2.512 s 5 13
Bradyrhizobium elkanii USDA 76 s 8 19
Bradyrhizobium sp. WSM1253 s 4 10
Microvirga lotononidis s 9 22
Coxiella burnetii 'MSU Goat Q177' s 6 15
Shigella dysenteriae 1012 s 6 15
Leptospira interrogans str. UI 12758 s 5 14
Leptospira mayottensis 200901122 s 9 21
Leptospira mayottensis 200901116 s 5 14
Leptospira santarosai str. JET s 4 10
Leptospira santarosai serovar Arenal str. MAVJ 401 s 5 12
Leptospira santarosai str. ST188 s 5 13
Leptospira interrogans serovar Grippotyphosa str. 2006006986 s 4 11
Leptospira santarosai str. 200403458 s 10 23
Leptospira santarosai str. 200702252 s 7 18
Sinorhizobium meliloti WSM4191 s 5 13
Rhizobium mesoamericanum STM6155 s 5 12
Paraburkholderia mimosarum LMG 23256 = NBRC 106338 s 4 11
Paraburkholderia mimosarum STM 3621 s 5 12
Burkholderia sp. WSM4176 s 9 22
Bradyrhizobium japonicum USDA 123 s 4 10
Bradyrhizobium sp. USDA 3384 s 4 10
Streptococcus suis 89/1591 s 5 12
Ruminiclostridium thermocellum JW20 s 4 11
Sutterella wadsworthensis 2_1_59BFAA s 4 10
Sinorhizobium fredii CCBAU 45436 s 4 10
Leptospira santarosai serovar Shermani str. LT 821 s 5 12
Shigella dysenteriae CDC 74-1112 s 5 14
[Clostridium] clostridioforme 90A6 s 5 14
[Clostridium] clostridioforme 90A4 s 5 14
[Clostridium] clostridioforme 90B1 s 5 14
[Clostridium] clostridioforme 90A1 s 7 17
[Clostridium] clostridioforme 90A3 s 5 13
[Clostridium] clostridioforme 90A8 s 5 12
[Clostridium] clostridioforme CM201 s 5 13
Hungatella hathewayi 12489931 s 4 10
Rhizobium leguminosarum bv. trifolii CC278f s 4 11
Frankia sp. EAN1pec s 4 10
Streptococcus suis ST3 s 4 10
Lactobacillus amylovorus s 4 10
Shigella boydii Sb227 s 5 13
Leptospira borgpetersenii serovar Hardjo-bovis str. L550 s 15 35
Coxiella burnetii CbuK_Q154 s 6 16
Lactobacillus delbrueckii subsp. bulgaricus ND02 s 4 10
Shigella boydii CDC 3083-94 s 6 15
Sinorhizobium fredii USDA 257 s 4 10
Klebsiella pneumoniae subsp. pneumoniae KPNIH27 s 4 10
Sinorhizobium sp. PC2 s 7 17
Yersinia enterocolitica s 7 18
Streptococcus suis 6407 s 5 12
Candidatus Paracaedibacter acanthamoebae s 4 11
Yersinia enterocolitica s 7 18
Shigella boydii 08-0009 s 6 15
Avibacterium paragallinarum s 4 11
Burkholderia ubonensis s 5 13
Burkholderia ubonensis s 4 11
Microvirga vignae s 6 15
Streptococcus suis s 4 10
Kozakia baliensis s 4 10
Kozakia baliensis s 4 10
Streptomyces scabiei s 4 10
Streptomyces scabiei s 4 11
Opitutaceae bacterium TSB47 s 6 15
Ensifer aridi s 5 14
Mycobacterium chimaera s 4 10
Bradyrhizobium liaoningense s 4 10
Bacillus simplex s 5 12
Paracoccus yeei s 7 17
Neisseria sicca s 4 10
Burkholderia cenocepacia s 4 10
Burkholderia cenocepacia s 4 11
Burkholderia cenocepacia s 4 10
Burkholderia cenocepacia s 4 10
Mycobacterium gordonae s 4 10
Mycobacterium gordonae s 4 11
Yersinia enterocolitica s 7 18
Yersinia enterocolitica s 9 22
Yersinia enterocolitica s 9 22
Yersinia enterocolitica s 9 22
Yersinia enterocolitica s 9 22
Yersinia enterocolitica s 9 22
Burkholderia sp. BT03 s 6 16
Mycobacterium avium subsp. paratuberculosis s 4 10
Bradyrhizobium diazoefficiens USDA 110 s 5 12
Bordetella pertussis Tohama I s 6 16
Coxiella burnetii RSA 493 s 8 20
Yersinia enterocolitica subsp. enterocolitica 8081 s 4 10
Staphylococcus epidermidis ATCC 12228 s 5 13
Leptospira interrogans serovar Lai str. 56601 s 20 46
[Pseudomonas syringae] pv. tomato str. DC3000 s 4 10
Sinorhizobium medicae WSM419 s 6 15
Sinorhizobium fredii NGR234 s 8 20

*p=pathogen;s=symbiont