Metamenu

Effective results for Erysipelotrichaceae bacterium 3_1_53 (eggnog40)

Summary

Number of putative secreted proteins: 247
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 31 eukaryotic-like domains, contained in 247 proteins (74 high, 173 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
658659.HMPREF0983_00369(PF08279) PF00359(mitochondrial)
658659.HMPREF0983_00524(PF08279) PF00359(ER)
658659.HMPREF0983_02529(PF08279) PF00359ER
658659.HMPREF0983_03579(PF08279) PF00359(mitochondrial)
658659.HMPREF0983_02950(PF01381)(mitochondrial)
658659.HMPREF0983_02946(PF11070)(mitochondrial); (plastid)
658659.HMPREF0983_03089(PF05935)ER
658659.HMPREF0983_00762(PF01381)(mitochondrial)
658659.HMPREF0983_02469(PF08279)ER; (ER)
658659.HMPREF0983_02001PF09820 PF08011(plastid)
658659.HMPREF0983_03055(PF01381)mitochondrial
658659.HMPREF0983_02908(PF01381)(mitochondrial)
658659.HMPREF0983_02670PF00359mitochondrial; (mitochondrial)
658659.HMPREF0983_00384PF08011ER; (ER)
658659.HMPREF0983_02810(PF00232)mitochondrial; (mitochondrial)
658659.HMPREF0983_00914(PF05738)ER
658659.HMPREF0983_00706(PF05738)mitochondrial; (mitochondrial)
658659.HMPREF0983_03906(PF05738)ER
658659.HMPREF0983_00119(PF05738)ER
658659.HMPREF0983_03003(PF05738)ER
658659.HMPREF0983_02176(PF08279)mitochondrial; (mitochondrial)
658659.HMPREF0983_00615(PF01116)(mitochondrial)
658659.HMPREF0983_00826PF08011mitochondrial
658659.HMPREF0983_01686(PF05738)ER
658659.HMPREF0983_00007(PF08282)ER
658659.HMPREF0983_03164(PF08279)(mitochondrial); mitochondrial
658659.HMPREF0983_02962PF00359mitochondrial; (mitochondrial)
658659.HMPREF0983_00570(PF00232)(ER)
658659.HMPREF0983_01820(PF01228) (PF02901)
658659.HMPREF0983_03407(PF13474)(mitochondrial)
658659.HMPREF0983_00214(PF08279) PF00359
658659.HMPREF0983_02843(PF01228) (PF02901)
658659.HMPREF0983_02292(PF08125)(mitochondrial)
658659.HMPREF0983_02920(PF08282)(plastid)
658659.HMPREF0983_02928(PF08279)(mitochondrial)
658659.HMPREF0983_02269(PF08125)(mitochondrial)
658659.HMPREF0983_02708PF09820 PF08011
658659.HMPREF0983_00647(PF08279) PF00359
658659.HMPREF0983_00721(PF08279) PF00359
658659.HMPREF0983_00728PF09820 PF08011
658659.HMPREF0983_01413PF09820 PF08011
658659.HMPREF0983_00781(PF08279) PF00359
658659.HMPREF0983_03389(PF08279) PF00359
658659.HMPREF0983_01408PF09820 PF08011
658659.HMPREF0983_00455(PF01228) (PF02901)
658659.HMPREF0983_01898(PF01228) (PF02901)
658659.HMPREF0983_03904(PF01238)(ER)
658659.HMPREF0983_04036(PF01228) (PF02901)
658659.HMPREF0983_03222PF09820 PF08011
658659.HMPREF0983_00314PF09820 PF08011
658659.HMPREF0983_03413(PF16403)(mitochondrial)
658659.HMPREF0983_02141(PF01228) (PF02901)
658659.HMPREF0983_00510(PF01381)not used
658659.HMPREF0983_04072(PF01784)
658659.HMPREF0983_04074(PF01784)
658659.HMPREF0983_00378(PF08282)
658659.HMPREF0983_00578(PF00398)
658659.HMPREF0983_03626(PF00215)
658659.HMPREF0983_03578(PF08282)
658659.HMPREF0983_02618(PF01381)
658659.HMPREF0983_02428(PF08282)
658659.HMPREF0983_00818(PF01081)
658659.HMPREF0983_02047(PF01381)
658659.HMPREF0983_02980(PF00232)
658659.HMPREF0983_00893(PF01381)
658659.HMPREF0983_01141PF14523
658659.HMPREF0983_00782PF00359
658659.HMPREF0983_00140(PF01381)
658659.HMPREF0983_00145(PF01381)
658659.HMPREF0983_00365PF00359
658659.HMPREF0983_00564PF00359
658659.HMPREF0983_00213(PF00232)
658659.HMPREF0983_03144(PF01381)
658659.HMPREF0983_02544(PF01381)
658659.HMPREF0983_00682PF00359
658659.HMPREF0983_00779(PF01116)
658659.HMPREF0983_04053(PF01381)not used
658659.HMPREF0983_04050(PF01381)
658659.HMPREF0983_00515(PF01381)
658659.HMPREF0983_03085(PF01381)
658659.HMPREF0983_03552(PF08282)
658659.HMPREF0983_02598(PF08279)
658659.HMPREF0983_02449PF09820
658659.HMPREF0983_01976(PF02873)
658659.HMPREF0983_01745(PF01381)
658659.HMPREF0983_00167(PF08282)
658659.HMPREF0983_02599PF00359
658659.HMPREF0983_00186(PF01381)
658659.HMPREF0983_00188(PF00958)
658659.HMPREF0983_00509(PF01381)not used
658659.HMPREF0983_00235(PF01381)
658659.HMPREF0983_02291(PF08125)
658659.HMPREF0983_02114(PF08282)
658659.HMPREF0983_03638PF00834
658659.HMPREF0983_01903(PF00215)
658659.HMPREF0983_04123PF16709
658659.HMPREF0983_02583(PF01381)
658659.HMPREF0983_03858PF00359
658659.HMPREF0983_03988(PF01381)
658659.HMPREF0983_02450PF09820
658659.HMPREF0983_02452PF08011
658659.HMPREF0983_01594(PF08282)
658659.HMPREF0983_01597(PF00215)
658659.HMPREF0983_01590(PF01238)
658659.HMPREF0983_01593(PF08282)
658659.HMPREF0983_00402PF00359
658659.HMPREF0983_03535(PF01381)
658659.HMPREF0983_02267PF00834
658659.HMPREF0983_02268PF00834
658659.HMPREF0983_03997(PF01381)
658659.HMPREF0983_02464(PF06176)
658659.HMPREF0983_02716(PF08282)
658659.HMPREF0983_02712(PF13474)
658659.HMPREF0983_01105(PF01784)
658659.HMPREF0983_01722(PF01381)
658659.HMPREF0983_01721(PF01381)
658659.HMPREF0983_01720(PF01381)
658659.HMPREF0983_00746PF00359
658659.HMPREF0983_00521PF00359
658659.HMPREF0983_00251(PF01381)
658659.HMPREF0983_00254(PF01381)not used
658659.HMPREF0983_04206PF09820not used
658659.HMPREF0983_00418PF00359
658659.HMPREF0983_03056(PF01381)
658659.HMPREF0983_02272(PF01081)
658659.HMPREF0983_01921(PF05738)
658659.HMPREF0983_02278(PF01081)
658659.HMPREF0983_03610(PF03266)
658659.HMPREF0983_03870(PF01381)
658659.HMPREF0983_02671PF00359
658659.HMPREF0983_02672PF00359
658659.HMPREF0983_02490(PF16403)
658659.HMPREF0983_01288(PF01081)
658659.HMPREF0983_02702(PF08279)
658659.HMPREF0983_02703PF00359
658659.HMPREF0983_01605(PF01381)
658659.HMPREF0983_04140(PF01381)
658659.HMPREF0983_00082(PF16403)
658659.HMPREF0983_00435PF00359
658659.HMPREF0983_00432PF00359
658659.HMPREF0983_03867(PF01381)not used
658659.HMPREF0983_03861(PF00232)
658659.HMPREF0983_02399(PF01381)
658659.HMPREF0983_01633(PF13474)
658659.HMPREF0983_00722PF00359
658659.HMPREF0983_00891(PF00398)
658659.HMPREF0983_01411(PF13474)
658659.HMPREF0983_01415PF09820
658659.HMPREF0983_00658(PF08125)
658659.HMPREF0983_00653PF00359
658659.HMPREF0983_00478(PF01381)
658659.HMPREF0983_00475(PF01381)
658659.HMPREF0983_00476(PF01381)
658659.HMPREF0983_00383PF09820
658659.HMPREF0983_03676PF00359
658659.HMPREF0983_03674(PF01116)
658659.HMPREF0983_03678PF00834
658659.HMPREF0983_03253PF09820
658659.HMPREF0983_03252PF08011
658659.HMPREF0983_03255PF09820
658659.HMPREF0983_03926PF00359
658659.HMPREF0983_03925(PF01116)
658659.HMPREF0983_03922PF00359
658659.HMPREF0983_02812(PF00232)
658659.HMPREF0983_01712(PF13474)
658659.HMPREF0983_01710(PF13474)
658659.HMPREF0983_00661PF00359
658659.HMPREF0983_00662(PF01238)
658659.HMPREF0983_00041(PF08282)
658659.HMPREF0983_00045(PF08282)
658659.HMPREF0983_00446PF00359
658659.HMPREF0983_00440PF00359
658659.HMPREF0983_03667(PF01116)
658659.HMPREF0983_02285(PF08282)
658659.HMPREF0983_02286(PF01116)
658659.HMPREF0983_02533(PF00232)
658659.HMPREF0983_00708(PF05738)
658659.HMPREF0983_00674PF00359
658659.HMPREF0983_04025(PF01381)
658659.HMPREF0983_00456(PF00232)
658659.HMPREF0983_03658(PF01381)
658659.HMPREF0983_03901(PF08282)
658659.HMPREF0983_03903(PF08282)
658659.HMPREF0983_03902(PF08282)
658659.HMPREF0983_03909(PF01381)
658659.HMPREF0983_03831(PF08279)
658659.HMPREF0983_02294(PF01081)
658659.HMPREF0983_00908(PF01381)
658659.HMPREF0983_04100(PF01381)
658659.HMPREF0983_00021(PF01381)
658659.HMPREF0983_00118(PF05738)
658659.HMPREF0983_00330(PF08125)
658659.HMPREF0983_00339(PF08279)
658659.HMPREF0983_03001(PF01081)
658659.HMPREF0983_01888(PF02873)
658659.HMPREF0983_03642(PF01116)
658659.HMPREF0983_03646PF00359
658659.HMPREF0983_03647(PF08279)
658659.HMPREF0983_03644(PF00232)
658659.HMPREF0983_02357(PF08282)
658659.HMPREF0983_02601(PF01116)
658659.HMPREF0983_02602PF00359
658659.HMPREF0983_03913(PF01381)not used
658659.HMPREF0983_03824PF00834
658659.HMPREF0983_02510(PF08282)
658659.HMPREF0983_03829PF00834
658659.HMPREF0983_02779(PF00232)
658659.HMPREF0983_00584(PF08282)
658659.HMPREF0983_00611PF00359
658659.HMPREF0983_00612PF00359
658659.HMPREF0983_00616(PF01116)
658659.HMPREF0983_00039(PF08282)
658659.HMPREF0983_01323(PF08282)
658659.HMPREF0983_04138(PF01381)
658659.HMPREF0983_03031PF08011
658659.HMPREF0983_03030PF09820
658659.HMPREF0983_01984(PF12646)
658659.HMPREF0983_03100(PF01381)
658659.HMPREF0983_03104(PF08279)
658659.HMPREF0983_03107(PF00232)
658659.HMPREF0983_03585(PF00232)
658659.HMPREF0983_03583(PF00232)
658659.HMPREF0983_01852(PF08282)
658659.HMPREF0983_02615(PF00398)
658659.HMPREF0983_00620(PF01238)
658659.HMPREF0983_01532PF00359
658659.HMPREF0983_01531(PF08282)
658659.HMPREF0983_00313(PF01381)
658659.HMPREF0983_00315(PF01381)
658659.HMPREF0983_00005(PF01381)
658659.HMPREF0983_03118(PF08282)
658659.HMPREF0983_03596(PF08326)
658659.HMPREF0983_02088PF00834
658659.HMPREF0983_02970PF00834
658659.HMPREF0983_03783(PF08125)
658659.HMPREF0983_02798(PF00215)
658659.HMPREF0983_01541(PF06777)
658659.HMPREF0983_03169(PF08282)
658659.HMPREF0983_02363PF00359
658659.HMPREF0983_02097PF08011
658659.HMPREF0983_02969PF00834
658659.HMPREF0983_02965PF00359
658659.HMPREF0983_02967(PF00215)
658659.HMPREF0983_01945(PF00232)
658659.HMPREF0983_02568(PF00958)
658659.HMPREF0983_02143(PF01381)
658659.HMPREF0983_02785(PF05935)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================