Metamenu

Effective results for Eubacterium cellulosolvens 6 (eggnog40)

Summary

Number of putative secreted proteins: 87
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 25 eukaryotic-like domains, contained in 87 proteins (4 high, 83 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
633697.EubceDRAFT_0719(PF02018) (PF00759)ER
633697.EubceDRAFT_0688(PF02018) (PF00759)ER
633697.EubceDRAFT_1256(PF02018) (PF00759)ER
633697.EubceDRAFT_0718(PF00112)ER
633697.EubceDRAFT_0144(PF06541)ER
633697.EubceDRAFT_1937(PF14200)ER
633697.EubceDRAFT_0600(PF00209)(ER)
633697.EubceDRAFT_0601(PF00209)(ER)
633697.EubceDRAFT_2165(PF00759)ER
633697.EubceDRAFT_0722(PF00112)(ER)
633697.EubceDRAFT_0617(PF14200)(ER)
633697.EubceDRAFT_0616(PF14200) (PF00759)(plastid)
633697.EubceDRAFT_0615(PF14200)ER
633697.EubceDRAFT_0614(PF14200)ER
633697.EubceDRAFT_0613(PF14200)ER
633697.EubceDRAFT_1666(PF06541)ER
633697.EubceDRAFT_1660(PF14200)ER
633697.EubceDRAFT_1893(PF14200)ER
633697.EubceDRAFT_2659(PF02018)ER
633697.EubceDRAFT_0924(PF00112)(ER)
633697.EubceDRAFT_0920(PF00759)ER
633697.EubceDRAFT_2010(PF02018)ER
633697.EubceDRAFT_2588(PF06541)ER
633697.EubceDRAFT_1659(PF14200)mitochondrial
633697.EubceDRAFT_0919(PF00759)mitochondrial
633697.EubceDRAFT_1263PF09736ER
633697.EubceDRAFT_0215(PF14200)ER
633697.EubceDRAFT_2097(PF13240)(mitochondrial)
633697.EubceDRAFT_0761(PF14200)ER
633697.EubceDRAFT_2155(PF14200)ER
633697.EubceDRAFT_1175(PF03283)(ER); ER
633697.EubceDRAFT_2179(PF06165) (PF17167)
633697.EubceDRAFT_1589(PF06165) (PF17167)
633697.EubceDRAFT_0670(PF05704)(mitochondrial)
633697.EubceDRAFT_2300(PF13394)(ER)
633697.EubceDRAFT_0653(PF17167) (PF06165)
633697.EubceDRAFT_0652(PF17167) (PF06165)
633697.EubceDRAFT_1944(PF01501)(ER)
633697.EubceDRAFT_0494(PF00209)(ER)
633697.EubceDRAFT_2402(PF14512)(plastid)
633697.EubceDRAFT_1005(PF12437)
633697.EubceDRAFT_1494(PF04326)
633697.EubceDRAFT_1726(PF08797)
633697.EubceDRAFT_0701(PF01128)
633697.EubceDRAFT_0704(PF13394)
633697.EubceDRAFT_0529(PF13240)
633697.EubceDRAFT_0454(PF00209)
633697.EubceDRAFT_2171PF13151
633697.EubceDRAFT_2592(PF13394)
633697.EubceDRAFT_2162(PF03283)
633697.EubceDRAFT_2298(PF13240)
633697.EubceDRAFT_1138(PF13240)
633697.EubceDRAFT_1595PF13151
633697.EubceDRAFT_0067(PF01501)
633697.EubceDRAFT_1842(PF00302)
633697.EubceDRAFT_1051(PF03309)
633697.EubceDRAFT_0891(PF12437)
633697.EubceDRAFT_1070(PF01991)
633697.EubceDRAFT_0420(PF13240)
633697.EubceDRAFT_2121(PF14622)
633697.EubceDRAFT_0781(PF13240)
633697.EubceDRAFT_1302(PF13394)
633697.EubceDRAFT_0433(PF14512)
633697.EubceDRAFT_1268(PF01795)
633697.EubceDRAFT_2519(PF14622)
633697.EubceDRAFT_0793(PF04326)
633697.EubceDRAFT_2472(PF13394)
633697.EubceDRAFT_1522(PF01501)
633697.EubceDRAFT_2446(PF00302)
633697.EubceDRAFT_2223(PF14200)
633697.EubceDRAFT_0757(PF13394)
633697.EubceDRAFT_2180(PF01795)
633697.EubceDRAFT_2456PF13151
633697.EubceDRAFT_2528(PF13394)
633697.EubceDRAFT_2523(PF04326)
633697.EubceDRAFT_0744(PF03309)
633697.EubceDRAFT_1768(PF04326)
633697.EubceDRAFT_0569(PF03309)
633697.EubceDRAFT_2607(PF08797)
633697.EubceDRAFT_1976(PF13394)
633697.EubceDRAFT_1516(PF01128)
633697.EubceDRAFT_0399(PF00209)
633697.EubceDRAFT_1943(PF01501)
633697.EubceDRAFT_1946(PF01501)
633697.EubceDRAFT_0833(PF04326)
633697.EubceDRAFT_1173(PF01128)
633697.EubceDRAFT_2574(PF13240)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================