Metamenu

Effective results for Marvinbryantia formatexigens DSM 14469 (eggnog40)

Summary

Number of putative secreted proteins: 285
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 39 eukaryotic-like domains, contained in 285 proteins (74 high, 211 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
478749.BRYFOR_09880(PF01915) (PF00933) (PF14310)(mitochondrial); (ER)
478749.BRYFOR_07059(PF01915) (PF00933) (PF14310)ER
478749.BRYFOR_09536(PF01915) (PF00933) (PF14310)ER
478749.BRYFOR_07061(PF01915) (PF00933) (PF14310)(ER)
478749.BRYFOR_08861(PF01915) (PF00933) (PF14310)ER
478749.BRYFOR_05265PF09820 (PF01381) PF08011(mitochondrial)
478749.BRYFOR_08110(PF01915) (PF00933) (PF14310)(mitochondrial)
478749.BRYFOR_09312PF09820 PF08011(mitochondrial)
478749.BRYFOR_06915(PF01915) (PF00933)ER; (mitochondrial)
478749.BRYFOR_06917(PF01915) (PF00933)ER; (ER)
478749.BRYFOR_05917PF09820 PF08011(mitochondrial)
478749.BRYFOR_05924(PF00703) (PF02836) (PF02837)
478749.BRYFOR_09939(PF01381)(mitochondrial)
478749.BRYFOR_06610PF01554(ER)
478749.BRYFOR_09412(PF02368)ER
478749.BRYFOR_08655PF01554(ER)
478749.BRYFOR_08476(PF04886)ER
478749.BRYFOR_05931(PF06480)ER
478749.BRYFOR_09475(PF06541)(ER)
478749.BRYFOR_09394(PF01381)(mitochondrial); mitochondrial
478749.BRYFOR_08862(PF01915) (PF00933) (PF14310)
478749.BRYFOR_08716(PF13529)ER
478749.BRYFOR_09710(PF06541)ER
478749.BRYFOR_08047(PF06541)ER
478749.BRYFOR_09090(PF02368)ER
478749.BRYFOR_09273(PF00882)(mitochondrial)
478749.BRYFOR_08294(PF03644)(ER)
478749.BRYFOR_09643PF01554ER
478749.BRYFOR_08026(PF02368)ER
478749.BRYFOR_06733(PF01915) (PF00933) (PF14310)
478749.BRYFOR_06732(PF01915) (PF00933) (PF14310)
478749.BRYFOR_07733PF01554ER
478749.BRYFOR_07839(PF01915) (PF00933) (PF14310)
478749.BRYFOR_07831(PF00703) (PF02836) (PF02837)
478749.BRYFOR_09674(PF00664)mitochondrial
478749.BRYFOR_06725PF01554ER
478749.BRYFOR_07225(PF02368)ER
478749.BRYFOR_05502(PF00664)mitochondrial
478749.BRYFOR_09207(PF00703) (PF02836) (PF02837)
478749.BRYFOR_09446(PF01915) (PF00933) (PF14310)
478749.BRYFOR_06664(PF00664)(ER)
478749.BRYFOR_06404(PF01229)ER
478749.BRYFOR_07218(PF00703) (PF02836) (PF02837)
478749.BRYFOR_05519(PF00664)(ER)
478749.BRYFOR_06896(PF02368)ER
478749.BRYFOR_09548(PF13173)(mitochondrial)
478749.BRYFOR_05178(PF01915) (PF00933) (PF14310)
478749.BRYFOR_07673(PF02719)(ER)
478749.BRYFOR_07208(PF01915) (PF00933) (PF14310)
478749.BRYFOR_07209(PF02368)ER
478749.BRYFOR_07843(PF00664)(mitochondrial)
478749.BRYFOR_09949(PF00664)ER; (ER)
478749.BRYFOR_06023PF01554(ER)
478749.BRYFOR_07355PF01554(ER)
478749.BRYFOR_09953(PF02719)ER
478749.BRYFOR_07305(PF13173)mitochondrial
478749.BRYFOR_08976(PF05738)ER
478749.BRYFOR_05225(PF00664)ER
478749.BRYFOR_09762(PF01381)(mitochondrial)
478749.BRYFOR_08364PF01554ER; (ER)
478749.BRYFOR_08211(PF00664)ER; (ER)
478749.BRYFOR_06434PF01554(ER); ER
478749.BRYFOR_06326(PF13173)mitochondrial
478749.BRYFOR_06910(PF00703) (PF02836) (PF02837)
478749.BRYFOR_09151(PF13529)ER
478749.BRYFOR_05493(PF00664)(mitochondrial); mitochondrial
478749.BRYFOR_09791(PF00664)ER
478749.BRYFOR_09773(PF01915) (PF00933) (PF14310)
478749.BRYFOR_06122(PF00703) (PF02836) (PF02837)
478749.BRYFOR_06909(PF01915) (PF00933) (PF14310)
478749.BRYFOR_08180(PF02368)ER
478749.BRYFOR_08183(PF00703) (PF02836) (PF02837)
478749.BRYFOR_08238(PF01381)(mitochondrial)
478749.BRYFOR_08232(PF01915) (PF00933) (PF14310)
478749.BRYFOR_08230(PF00703) (PF02836) (PF02837)
478749.BRYFOR_08433(PF13529)ER
478749.BRYFOR_06698(PF06541)ER
478749.BRYFOR_07242(PF00664)mitochondrial
478749.BRYFOR_08980(PF13529)(mitochondrial)
478749.BRYFOR_09005(PF01381)(mitochondrial)
478749.BRYFOR_06974(PF06480)ER
478749.BRYFOR_05476(PF05738)ER
478749.BRYFOR_06807PF01554(mitochondrial)
478749.BRYFOR_05294(PF01915) (PF00933) (PF14310)
478749.BRYFOR_05330(PF01915) (PF00933) (PF14310)
478749.BRYFOR_06100(PF00703) (PF02836) (PF02837)
478749.BRYFOR_06101(PF00703) (PF02836) (PF02837)
478749.BRYFOR_05612(PF00664)ER
478749.BRYFOR_06816(PF01915)(mitochondrial)
478749.BRYFOR_09439(PF00703) (PF02836) (PF02837)
478749.BRYFOR_06743PF01554(ER)
478749.BRYFOR_06171(PF02368)ER
478749.BRYFOR_07281PF01554ER; (ER)
478749.BRYFOR_06950(PF13529)(mitochondrial)
478749.BRYFOR_06956PF01554(ER)
478749.BRYFOR_09424(PF02368)(mitochondrial)
478749.BRYFOR_06554(PF01381)mitochondrial
478749.BRYFOR_09634PF01554(plastid)
478749.BRYFOR_09411(PF01381)(mitochondrial)
478749.BRYFOR_07013PF01554(mitochondrial)
478749.BRYFOR_05717(PF06964)(mitochondrial)
478749.BRYFOR_08860PF09820 PF08011
478749.BRYFOR_09716(PF01381)(ER)
478749.BRYFOR_08286PF09820 PF08011
478749.BRYFOR_07147(PF00703) (PF02837)
478749.BRYFOR_07729PF09820 PF08011
478749.BRYFOR_06199PF09820 PF08011
478749.BRYFOR_06993(PF00664)(ER)
478749.BRYFOR_08607PF09820 PF08011
478749.BRYFOR_06665(PF00664)(ER)
478749.BRYFOR_08000PF09820 PF08011
478749.BRYFOR_06400PF09820 PF08011
478749.BRYFOR_09541PF09820 PF08011
478749.BRYFOR_09309PF09820 PF08011
478749.BRYFOR_08123(PF02836) (PF02837)
478749.BRYFOR_09748PF01554(plastid)
478749.BRYFOR_07442PF09820 PF08011
478749.BRYFOR_07063PF09820 PF08011
478749.BRYFOR_06325PF09820 PF08011
478749.BRYFOR_07886PF09820 PF08011
478749.BRYFOR_05492(PF00664)(mitochondrial)
478749.BRYFOR_08226PF09820 PF08011
478749.BRYFOR_06212(PF01381)(mitochondrial)
478749.BRYFOR_05725PF09820 PF08011
478749.BRYFOR_09294PF09820 PF08011
478749.BRYFOR_09292PF09820 PF08011
478749.BRYFOR_05042PF09820 PF08011
478749.BRYFOR_05049PF01554(mitochondrial)
478749.BRYFOR_06582PF09820 PF08011
478749.BRYFOR_05733(PF01381)(plastid)
478749.BRYFOR_07361PF01554
478749.BRYFOR_05700(PF04326)
478749.BRYFOR_05446(PF05738)
478749.BRYFOR_09639PF01554
478749.BRYFOR_08386(PF13597)
478749.BRYFOR_08387(PF13597)not used
478749.BRYFOR_06493(PF13481)
478749.BRYFOR_08277PF08011
478749.BRYFOR_05621(PF16387)
478749.BRYFOR_07840(PF00703)
478749.BRYFOR_05389(PF01381)
478749.BRYFOR_07570(PF01381)
478749.BRYFOR_08660(PF01381)
478749.BRYFOR_08662PF01554
478749.BRYFOR_06147(PF01381)
478749.BRYFOR_06145(PF06250)
478749.BRYFOR_05899(PF06480)
478749.BRYFOR_05422(PF01381)
478749.BRYFOR_08916PF01554
478749.BRYFOR_08672(PF00664)
478749.BRYFOR_08678(PF13481)
478749.BRYFOR_05176PF01554
478749.BRYFOR_09858PF13151
478749.BRYFOR_09895PF01554
478749.BRYFOR_05951PF01554
478749.BRYFOR_06045(PF01381)
478749.BRYFOR_07934(PF02938)
478749.BRYFOR_05776PF13151
478749.BRYFOR_05411(PF01381)
478749.BRYFOR_05413(PF01381)
478749.BRYFOR_06991(PF12646)
478749.BRYFOR_06992(PF00664)
478749.BRYFOR_08023(PF13481)
478749.BRYFOR_05180(PF00664)
478749.BRYFOR_06604(PF04326)
478749.BRYFOR_06600(PF01381)
478749.BRYFOR_05740(PF01381)
478749.BRYFOR_05980(PF01381)
478749.BRYFOR_05986(PF01381)not used
478749.BRYFOR_07904(PF04326)
478749.BRYFOR_06182PF13151
478749.BRYFOR_08857(PF00933)
478749.BRYFOR_09673(PF00664)
478749.BRYFOR_06870(PF00703)
478749.BRYFOR_08039PF01554
478749.BRYFOR_08320(PF01381)
478749.BRYFOR_07587(PF13481)
478749.BRYFOR_06505(PF05738)
478749.BRYFOR_05975(PF00664)
478749.BRYFOR_06470(PF13481)
478749.BRYFOR_05597PF01554
478749.BRYFOR_08928(PF00933)
478749.BRYFOR_08924(PF01381)
478749.BRYFOR_05501(PF00664)
478749.BRYFOR_09331(PF02719)
478749.BRYFOR_09339(PF02719)
478749.BRYFOR_05323(PF07247)
478749.BRYFOR_08314(PF12437)
478749.BRYFOR_09330PF08011
478749.BRYFOR_06401PF09820
478749.BRYFOR_09840(PF00882)
478749.BRYFOR_07851(PF00664)
478749.BRYFOR_07850(PF00664)
478749.BRYFOR_06091(PF02126)
478749.BRYFOR_06096(PF06250)
478749.BRYFOR_06097(PF06250)
478749.BRYFOR_06099PF01554
478749.BRYFOR_05552(PF01381)
478749.BRYFOR_07693(PF01381)
478749.BRYFOR_08121(PF00933)
478749.BRYFOR_08124(PF01381)
478749.BRYFOR_05179(PF00664)
478749.BRYFOR_07207PF01554
478749.BRYFOR_09830(PF06250)
478749.BRYFOR_07842(PF00664)
478749.BRYFOR_06240(PF01381)
478749.BRYFOR_08941(PF13173)
478749.BRYFOR_05520(PF00664)
478749.BRYFOR_05523PF01554
478749.BRYFOR_05522PF01554
478749.BRYFOR_05011(PF06964)
478749.BRYFOR_05010(PF06964)
478749.BRYFOR_08205(PF04326)
478749.BRYFOR_08208(PF06480)
478749.BRYFOR_07662PF01554
478749.BRYFOR_07275PF01554
478749.BRYFOR_06333PF01554
478749.BRYFOR_07307(PF01381)
478749.BRYFOR_05226(PF00664)
478749.BRYFOR_05229(PF00059)
478749.BRYFOR_08149(PF04383)
478749.BRYFOR_08210(PF00664)
478749.BRYFOR_08218(PF01381)
478749.BRYFOR_08219PF13151
478749.BRYFOR_09811(PF00664)not used
478749.BRYFOR_09810(PF00664)
478749.BRYFOR_07261(PF13173)
478749.BRYFOR_07262(PF06250)not used
478749.BRYFOR_08963(PF01381)
478749.BRYFOR_09026PF01554
478749.BRYFOR_09029(PF14310)
478749.BRYFOR_05250PF01554
478749.BRYFOR_09772(PF02126)
478749.BRYFOR_08686(PF00664)
478749.BRYFOR_08682(PF01381)
478749.BRYFOR_08771(PF04326)
478749.BRYFOR_09808(PF06480)
478749.BRYFOR_06233PF13151
478749.BRYFOR_07321PF13151
478749.BRYFOR_07320(PF01381)
478749.BRYFOR_05671(PF04383)
478749.BRYFOR_05486(PF02368)
478749.BRYFOR_07414(PF14490)
478749.BRYFOR_09741(PF13597)
478749.BRYFOR_08691(PF02912)
478749.BRYFOR_08692(PF02912)not used
478749.BRYFOR_08762(PF06541)
478749.BRYFOR_09582(PF01018)
478749.BRYFOR_08231(PF01229)
478749.BRYFOR_07241(PF00664)
478749.BRYFOR_05805(PF05738)
478749.BRYFOR_08985(PF01381)
478749.BRYFOR_09009(PF13481)
478749.BRYFOR_05279(PF06964)
478749.BRYFOR_06977PF01554
478749.BRYFOR_05586(PF01381)
478749.BRYFOR_09355(PF02719)
478749.BRYFOR_05299(PF01381)
478749.BRYFOR_08407PF01554
478749.BRYFOR_05909(PF01381)
478749.BRYFOR_06218(PF01018)not used
478749.BRYFOR_07296(PF13173)
478749.BRYFOR_05613(PF00664)
478749.BRYFOR_05727(PF13173)
478749.BRYFOR_09293PF09820
478749.BRYFOR_06810(PF14490)
478749.BRYFOR_06817(PF00933)
478749.BRYFOR_09725(PF14490)
478749.BRYFOR_09610PF01554
478749.BRYFOR_07503(PF01381)
478749.BRYFOR_08259PF01554
478749.BRYFOR_05918(PF12437)
478749.BRYFOR_05911(PF04326)
478749.BRYFOR_05604(PF01381)
478749.BRYFOR_09736(PF02938)
478749.BRYFOR_09730(PF01381)
478749.BRYFOR_07420(PF02126)
478749.BRYFOR_06957(PF01381)
478749.BRYFOR_08734(PF06964)
478749.BRYFOR_08733(PF01229)
478749.BRYFOR_08731(PF13481)
478749.BRYFOR_08642PF01554
478749.BRYFOR_08647(PF06250)
478749.BRYFOR_05856PF09820
478749.BRYFOR_06559PF01554

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================