Metamenu

Effective results for Streptomyces sp. Mg1 (eggnog40)

Summary

Number of putative secreted proteins: 277
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 53 eukaryotic-like domains, contained in 277 proteins (9 high, 268 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
465541.SSAG_05272(PF17103) (PF17101) (PF11380) (PF17102)(plastid)
465541.SSAG_05274(PF17103) (PF17101) (PF11380) (PF17102)plastid
465541.SSAG_01422(PF13517) (PF05630)mitochondrial; (plastid)
465541.SSAG_06938(PF04539) (PF04545)(mitochondrial)
465541.SSAG_03541(PF05147)mitochondrial
465541.SSAG_06911(PF00438) (PF02773) (PF02772)
465541.SSAG_02207(PF07228)mitochondrial
465541.SSAG_06956PF00687(mitochondrial)
465541.SSAG_01376(PF14494)ER
465541.SSAG_05044(PF12740)(ER)
465541.SSAG_06507(PF12138)(mitochondrial)
465541.SSAG_05082(PF14273)ER
465541.SSAG_04753(PF14273)ER
465541.SSAG_04752(PF14273)ER
465541.SSAG_06313(PF14033)(mitochondrial); (plastid)
465541.SSAG_06306(PF07228)mitochondrial
465541.SSAG_00888(PF13517)mitochondrial
465541.SSAG_00038(PF00581)(mitochondrial)
465541.SSAG_03219(PF00438) (PF02773) (PF02772)
465541.SSAG_00544(PF00581)(mitochondrial); mitochondrial
465541.SSAG_00569(PF13517)ER
465541.SSAG_00250(PF01833)mitochondrial; (mitochondrial)
465541.SSAG_00874(PF13613)(mitochondrial)
465541.SSAG_04016(PF01483)mitochondrial
465541.SSAG_03444(PF13517)(ER); ER
465541.SSAG_03832(PF00571)ER
465541.SSAG_03831(PF00571)ER
465541.SSAG_00128(PF13613)mitochondrial; plastid
465541.SSAG_01863(PF07228)ER
465541.SSAG_00141(PF00582)mitochondrial
465541.SSAG_05011(PF05630)ER
465541.SSAG_00167(PF00582)mitochondrial
465541.SSAG_06017(PF00582)mitochondrial
465541.SSAG_05910(PF00571)ER
465541.SSAG_03329(PF00438) (PF02773) (PF02772)
465541.SSAG_04977(PF00581)(mitochondrial)
465541.SSAG_01130(PF13613)(mitochondrial)
465541.SSAG_03067(PF00275)(mitochondrial)
465541.SSAG_00623(PF07228)(mitochondrial)
465541.SSAG_04480(PF13517)mitochondrial; (mitochondrial)
465541.SSAG_02437(PF07228)mitochondrial
465541.SSAG_01204(PF07228)(mitochondrial); (plastid)
465541.SSAG_02842PF00687(mitochondrial)
465541.SSAG_05814(PF12051)(ER)
465541.SSAG_01488(PF00571)mitochondrial; (mitochondrial)
465541.SSAG_00687(PF13517)mitochondrial; (mitochondrial)
465541.SSAG_00686(PF13517)(ER)
465541.SSAG_00965(PF07228)ER
465541.SSAG_00234(PF01483)(ER)
465541.SSAG_00489(PF07228)ER
465541.SSAG_04347(PF00571)(mitochondrial); (ER)
465541.SSAG_04113(PF00582)mitochondrial
465541.SSAG_05210(PF13517)ER
465541.SSAG_00490(PF11999)ER; plastid
465541.SSAG_02081(PF01483)ER
465541.SSAG_02352(PF00571)ER
465541.SSAG_05020PF00161(ER)
465541.SSAG_01789(PF07228)(mitochondrial)
465541.SSAG_04935(PF13517)(ER)
465541.SSAG_02670(PF13613)(plastid)
465541.SSAG_00421(PF13613)(plastid)
465541.SSAG_01352(PF02148)(plastid)
465541.SSAG_04921(PF08659)(ER)
465541.SSAG_01706(PF04539) (PF04545)
465541.SSAG_03754(PF04539) (PF04545)
465541.SSAG_03753(PF04539) (PF04545)
465541.SSAG_01279(PF00571)(mitochondrial)
465541.SSAG_06807(PF04539) (PF04545)
465541.SSAG_00505(PF12051)(mitochondrial)
465541.SSAG_00248(PF13613)(mitochondrial)
465541.SSAG_03383PF03020(ER)
465541.SSAG_04292(PF00275)(mitochondrial)
465541.SSAG_03055(PF04539) (PF04545)
465541.SSAG_01157(PF13613)(plastid)
465541.SSAG_01824(PF04539) (PF04545)not used
465541.SSAG_01136(PF13613)(plastid)
465541.SSAG_06182(PF13613)(plastid)
465541.SSAG_04381(PF04539) (PF04545)
465541.SSAG_05783(PF04539) (PF04545)
465541.SSAG_06592(PF04539) (PF04545)
465541.SSAG_01555(PF01483)plastid
465541.SSAG_00210(PF04539) (PF04545)
465541.SSAG_00217(PF13613)(plastid)
465541.SSAG_00519(PF13613)(plastid)
465541.SSAG_00727(PF04539) (PF04545)
465541.SSAG_00705(PF01833)(plastid)
465541.SSAG_02554(PF04539) (PF04545)
465541.SSAG_00815(PF04539) (PF04545)
465541.SSAG_06221(PF08659)not used
465541.SSAG_06220(PF08659)
465541.SSAG_02764(PF00571)
465541.SSAG_00580(PF07228)
465541.SSAG_01446(PF07228)
465541.SSAG_01331(PF07228)
465541.SSAG_00315(PF00582)
465541.SSAG_00314(PF00582)not used
465541.SSAG_00313(PF00571)
465541.SSAG_00311(PF00582)
465541.SSAG_02765(PF04545)
465541.SSAG_04315(PF05147)
465541.SSAG_00379(PF08659)
465541.SSAG_04932(PF08659)not used
465541.SSAG_00291(PF02148)
465541.SSAG_04083(PF04545)
465541.SSAG_03053(PF01014)
465541.SSAG_06957(PF00298)
465541.SSAG_01594(PF13638)
465541.SSAG_00428(PF13499)
465541.SSAG_00358(PF00571)
465541.SSAG_03338(PF07228)
465541.SSAG_02062(PF01483)
465541.SSAG_05738PF13405
465541.SSAG_03079(PF00582)
465541.SSAG_04383(PF02148)
465541.SSAG_06525(PF07228)
465541.SSAG_06506(PF00581)
465541.SSAG_04922(PF08659)
465541.SSAG_05770(PF05147)
465541.SSAG_03037(PF07228)
465541.SSAG_01278(PF00582)
465541.SSAG_01275(PF12900)
465541.SSAG_01272(PF00582)
465541.SSAG_01216(PF13517)
465541.SSAG_00039(PF00581)
465541.SSAG_04687(PF02945)
465541.SSAG_06137(PF13499)
465541.SSAG_05655(PF04928)not used
465541.SSAG_04009(PF12740)
465541.SSAG_03795(PF07228)
465541.SSAG_05828(PF08659)
465541.SSAG_05829(PF08659)
465541.SSAG_05539(PF12900)
465541.SSAG_05532(PF04107)
465541.SSAG_00542(PF00581)
465541.SSAG_00545(PF00581)
465541.SSAG_06379(PF00581)
465541.SSAG_05670(PF00275)
465541.SSAG_05808(PF07228)
465541.SSAG_05110(PF07228)
465541.SSAG_00567PF00161
465541.SSAG_01439(PF04107)
465541.SSAG_01431(PF04107)
465541.SSAG_01927(PF01014)
465541.SSAG_04606(PF00571)
465541.SSAG_05862(PF04545)
465541.SSAG_00717(PF01833)
465541.SSAG_00529(PF07228)
465541.SSAG_00526(PF07228)
465541.SSAG_04352(PF00275)
465541.SSAG_04162(PF00582)
465541.SSAG_04835(PF08659)
465541.SSAG_06295(PF02898)
465541.SSAG_01418(PF13499)
465541.SSAG_03815(PF00581)
465541.SSAG_00106(PF07228)
465541.SSAG_00107(PF07228)
465541.SSAG_01086(PF00275)
465541.SSAG_04106(PF00581)
465541.SSAG_04100(PF00581)
465541.SSAG_04101(PF00581)
465541.SSAG_04819(PF05711)
465541.SSAG_02976(PF00581)
465541.SSAG_01692(PF13638)
465541.SSAG_00121(PF00582)
465541.SSAG_05692(PF00581)
465541.SSAG_00036(PF00581)
465541.SSAG_01864(PF07228)
465541.SSAG_06786(PF00571)
465541.SSAG_04742(PF07228)
465541.SSAG_03140(PF00582)
465541.SSAG_02540(PF04107)
465541.SSAG_00798(PF07228)
465541.SSAG_00597(PF07228)
465541.SSAG_05220(PF01980)
465541.SSAG_01303(PF00571)
465541.SSAG_00343(PF00582)
465541.SSAG_00304(PF00582)
465541.SSAG_00305(PF00582)
465541.SSAG_00306(PF00571)
465541.SSAG_05071(PF13582)
465541.SSAG_06219(PF08659)
465541.SSAG_06210(PF04545)
465541.SSAG_03533(PF13499)
465541.SSAG_01361(PF04545)
465541.SSAG_01580(PF07228)
465541.SSAG_00364(PF00571)
465541.SSAG_00365(PF00571)
465541.SSAG_00363(PF00582)
465541.SSAG_06007(PF00582)
465541.SSAG_03189(PF07228)
465541.SSAG_03187(PF17124)
465541.SSAG_05582(PF13499)
465541.SSAG_05054(PF02148)
465541.SSAG_05729(PF07228)
465541.SSAG_05059(PF07228)
465541.SSAG_04099(PF00581)
465541.SSAG_06493(PF07228)
465541.SSAG_00348PF02736
465541.SSAG_01294(PF00571)
465541.SSAG_04975(PF00581)
465541.SSAG_05702(PF03644)
465541.SSAG_01286(PF00582)
465541.SSAG_01282(PF00582)
465541.SSAG_01283(PF00582)
465541.SSAG_01280(PF00571)
465541.SSAG_01281(PF00571)
465541.SSAG_00340(PF00571)
465541.SSAG_00084(PF00581)
465541.SSAG_00887(PF13517)
465541.SSAG_04978(PF00581)
465541.SSAG_04572(PF02403)
465541.SSAG_04918(PF08659)
465541.SSAG_04911(PF08659)
465541.SSAG_04910(PF08659)
465541.SSAG_04913(PF08659)
465541.SSAG_04912(PF08659)
465541.SSAG_03497(PF07228)
465541.SSAG_00068(PF00582)
465541.SSAG_04762(PF07228)
465541.SSAG_03006(PF12900)
465541.SSAG_00472(PF11918)
465541.SSAG_03747(PF00582)
465541.SSAG_02197(PF07228)
465541.SSAG_05977(PF12862)
465541.SSAG_00459(PF11999)
465541.SSAG_01050(PF12900)
465541.SSAG_01261(PF12900)
465541.SSAG_01264(PF00582)
465541.SSAG_01267(PF00582)
465541.SSAG_01268(PF00582)
465541.SSAG_01269(PF00571)
465541.SSAG_01194(PF07228)
465541.SSAG_05337(PF08659)
465541.SSAG_01529(PF05147)
465541.SSAG_00925(PF07228)
465541.SSAG_02431PF03114
465541.SSAG_03202(PF17124)
465541.SSAG_03203(PF02148)
465541.SSAG_02843(PF00298)
465541.SSAG_05097(PF07228)
465541.SSAG_00576(PF01980)
465541.SSAG_00575(PF01980)
465541.SSAG_00688(PF13517)
465541.SSAG_03089(PF07228)
465541.SSAG_00746(PF00571)
465541.SSAG_05609(PF07228)
465541.SSAG_01036(PF00571)
465541.SSAG_06510(PF04107)
465541.SSAG_04302(PF07228)
465541.SSAG_06857(PF13638)
465541.SSAG_04828(PF05711)
465541.SSAG_06288(PF00275)
465541.SSAG_05164(PF00581)
465541.SSAG_03863(PF07228)
465541.SSAG_03134(PF07228)
465541.SSAG_03138(PF04545)
465541.SSAG_00742(PF07228)
465541.SSAG_00276(PF00571)
465541.SSAG_05184(PF07228)
465541.SSAG_01660(PF04545)
465541.SSAG_03118(PF12138)
465541.SSAG_00704(PF01833)
465541.SSAG_00702(PF08659)
465541.SSAG_04130(PF00581)
465541.SSAG_04797(PF02403)
465541.SSAG_06241(PF02898)
465541.SSAG_01457PF00241
465541.SSAG_06933(PF07228)
465541.SSAG_00339(PF00571)
465541.SSAG_00335(PF00571)
465541.SSAG_00336(PF00571)
465541.SSAG_00158(PF00582)
465541.SSAG_00329(PF00571)
465541.SSAG_03174(PF04107)
465541.SSAG_00494(PF04107)
465541.SSAG_00327(PF12900)
465541.SSAG_06305(PF07228)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================