Effective results for Burkholderia mallei ATCC 23344 (eggnog40)

Summary

Number of putative secreted proteins: 780
- Predicted by EffectiveT3: 154 (high confidence), 255 (low confidence)
- Predicted by EffectiveCCBD: 14 within, 7 before, 34 behind expected region 25..70aa
- Predicted by T4SEpre: 99
- Predicted by EffectiveELD: 15 eukaryotic-like domains, contained in 254 proteins (223 high, 31 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type III, (Type IV), Type VI

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
243160.BMAA1378PF13683 PF13276(mitochondrial)
243160.BMA2723+ER; (ER)
243160.BMA0441PF13683 PF13276(mitochondrial)
243160.BMA1375+(mitochondrial)
243160.BMA3394PF13683 PF13276(mitochondrial)
243160.BMAA1897(+)+(mitochondrial); (plastid)
243160.BMA1478PF13683 PF13276(mitochondrial)
243160.BMA2283PF13683 PF13276(mitochondrial)
243160.BMA2759PF13683 PF13276(mitochondrial)
243160.BMAA1789PF13683 PF13276(mitochondrial)
243160.BMAA0413PF13683 PF13276(mitochondrial)
243160.BMA2527PF13683 PF13276(mitochondrial)
243160.BMA2834PF13683 PF13276(mitochondrial)
243160.BMAA1099+(mitochondrial)
243160.BMA0456+(mitochondrial)
243160.BMAA1945+mitochondrial
243160.BMA1083PF13683 PF13276(mitochondrial)
243160.BMA0110PF13683 PF13276(mitochondrial)
243160.BMA0274+mitochondrial; (mitochondrial)
243160.BMA1141.1+mitochondrial; (mitochondrial)
243160.BMAA0174PF13683 PF13276(mitochondrial)
243160.BMAA1227PF13683 PF13276(mitochondrial)
243160.BMA0598(>)mitochondrial
243160.BMA2252+(mitochondrial)
243160.BMA1077PF13683 PF13276(mitochondrial)
243160.BMA3006PF13683 PF13276(mitochondrial)
243160.BMAA1947PF13683 PF13276(mitochondrial)
243160.BMA2199PF13683 PF13276(mitochondrial)
243160.BMA2351(PF08857)ER
243160.BMA3351PF13683 PF13276(mitochondrial)
243160.BMA0321PF13683 PF13276(mitochondrial)
243160.BMA2779(>)mitochondrial
243160.BMA0857PF13683 PF13276(mitochondrial)
243160.BMAA1308PF13683 PF13276(mitochondrial)
243160.BMAA0436PF13683 PF13276(mitochondrial)
243160.BMA1216PF13683 PF13276(mitochondrial)
243160.BMAA1054PF13683 PF13276(mitochondrial)
243160.BMA0131PF13683 PF13276(mitochondrial)
243160.BMA0005PF13683 PF13276(mitochondrial)
243160.BMA1537(PF05023)ER
243160.BMAA0555PF13683 PF13276(mitochondrial)
243160.BMAA0552PF13683 PF13276(mitochondrial)
243160.BMAA0083PF13683 PF13276(mitochondrial)
243160.BMAA0887PF13683 PF13276(mitochondrial)
243160.BMA1841PF13683 PF13276(mitochondrial)
243160.BMAA1339+ER
243160.BMAA0423+mitochondrial
243160.BMA1203PF13683 PF13276(mitochondrial)
243160.BMA0483PF13683 PF13276(mitochondrial)
243160.BMA2508+mitochondrial; (mitochondrial)
243160.BMAA0890PF13683 PF13276(mitochondrial)
243160.BMA3026PF13683 PF13276(mitochondrial)
243160.BMA2087PF13683 PF13276(mitochondrial)
243160.BMAA0489+mitochondrial
243160.BMA2793PF13683 PF13276(mitochondrial)
243160.BMA2564PF13683 PF13276(mitochondrial)
243160.BMA1232PF13683 PF13276(mitochondrial)
243160.BMA2899PF13683 PF13276(mitochondrial)
243160.BMA0495PF13683 PF13276(mitochondrial)
243160.BMA0948PF13683 PF13276(mitochondrial)
243160.BMAA1412PF13683 PF13276(mitochondrial)
243160.BMA1041PF13683 PF13276(mitochondrial)
243160.BMA0806PF13683 PF13276(mitochondrial)
243160.BMAA0194+mitochondrial; (mitochondrial)
243160.BMAA0992PF13683 PF13276(mitochondrial)
243160.BMA1954PF13683 PF13276(mitochondrial)
243160.BMAA1005PF13683 PF13276(mitochondrial)
243160.BMAA0845PF13683 PF13276(mitochondrial)
243160.BMAA0840+(mitochondrial); mitochondrial
243160.BMA0573PF13683 PF13276(mitochondrial)
243160.BMAA1901++(plastid)
243160.BMAA2092+(ER)
243160.BMA1763(>)ER
243160.BMA0586PF13683 PF13276(mitochondrial)
243160.BMA2225PF13683 PF13276(mitochondrial)
243160.BMAA0276PF13683 PF13276(mitochondrial)
243160.BMA1277(+)+(mitochondrial); (plastid)
243160.BMA3091PF13683 PF13276(mitochondrial)
243160.BMA0684+mitochondrial
243160.BMA2237(PF01610)(ER)
243160.BMA2231+(mitochondrial); (plastid)
243160.BMA1709+(mitochondrial)
243160.BMAA0609(PF09458)mitochondrial
243160.BMAA1975.1+(mitochondrial); plastid
243160.BMA1975PF13683 PF13276(mitochondrial)
243160.BMAA1644PF13683 PF13276(mitochondrial)
243160.BMAA1242+ER
243160.BMAA1023PF13683 PF13276(mitochondrial)
243160.BMA2687PF13683 PF13276(mitochondrial)
243160.BMAA0869PF13683 PF13276(mitochondrial)
243160.BMA1012+mitochondrial
243160.BMA2595PF13683 PF13276(mitochondrial)
243160.BMA1876(>)ER
243160.BMA0235++(plastid)
243160.BMA2655PF13683 PF13276(mitochondrial)
243160.BMAA0497PF13683 PF13276(mitochondrial)
243160.BMAA0811PF13683 PF13276(mitochondrial)
243160.BMA2695+(mitochondrial)
243160.BMA0500PF13683 PF13276(mitochondrial)
243160.BMA0436+ER
243160.BMA0757PF13683 PF13276(mitochondrial)
243160.BMA1759PF13683 PF13276(mitochondrial)
243160.BMA2217+(mitochondrial)
243160.BMA3183+ER
243160.BMA2103+ER; (ER)
243160.BMA0245+(mitochondrial); plastid
243160.BMA2078(>)(ER)
243160.BMAA0486+ER
243160.BMAA0318(>)mitochondrial
243160.BMA2491+ER
243160.BMA2268PF13683 PF13276(mitochondrial)
243160.BMA3195(>)ER
243160.BMA1439(>)ER
243160.BMAA0724PF13683 PF13276(mitochondrial)
243160.BMAA0342PF13683 PF13276(mitochondrial)
243160.BMA2671+(ER)
243160.BMAA1741PF13683 PF13276(mitochondrial)
243160.BMA1337+ER
243160.BMA1119PF13683 PF13276(mitochondrial)
243160.BMAA0308+ER
243160.BMA3290+mitochondrial
243160.BMA3164.1+(mitochondrial)
243160.BMA0266PF13683 PF13276(mitochondrial)
243160.BMAA0647PF13683 PF13276(mitochondrial)
243160.BMA1281+(ER); ER
243160.BMAA1512PF13683 PF13276(mitochondrial)
243160.BMAA1175PF13683 PF13276(mitochondrial)
243160.BMAA0918PF13683 PF13276(mitochondrial)
243160.BMAA2073PF13683 PF13276(mitochondrial)
243160.BMA0721PF13683 PF13276(mitochondrial)
243160.BMAA0881+mitochondrial; (mitochondrial)
243160.BMA0658PF13683 PF13276(mitochondrial)
243160.BMA2249PF13683 PF13276(mitochondrial)
243160.BMA3264+mitochondrial; (mitochondrial)
243160.BMAA0105PF13683 PF13276(mitochondrial)
243160.BMAA0584PF13683 PF13276(mitochondrial)
243160.BMAA1502+mitochondrial; (mitochondrial)
243160.BMAA1503PF13683 PF13276(mitochondrial)
243160.BMA0899PF13683 PF13276(mitochondrial)
243160.BMAA1185+ER; (ER)
243160.BMA1238(>)ER; mitochondrial
243160.BMAA1760PF13683 PF13276(mitochondrial)
243160.BMA1257PF13683 PF13276(mitochondrial)
243160.BMA0710+mitochondrial
243160.BMA1409PF13683 PF13276(mitochondrial)
243160.BMA0284PF13683 PF13276(mitochondrial)
243160.BMA0209+ER
243160.BMA2626(+)mitochondrial; (mitochondrial)
243160.BMAA0685(+)(>)(plastid)
243160.BMA3241(PF01610)(mitochondrial)
243160.BMA2639(PF01610)(mitochondrial)
243160.BMAA1369+(mitochondrial)
243160.BMAA0418+(plastid)
243160.BMA0450++
243160.BMA1512(PF01610)(mitochondrial)
243160.BMA1863(PF01610)(mitochondrial)
243160.BMAA1316(+)(mitochondrial)
243160.BMA0590(+)ER; (ER)
243160.BMA1894.2+plastid
243160.BMAA1944(+)(ER)
243160.BMA0614+(plastid)
243160.BMAA1102(+)(mitochondrial)
243160.BMAA1123(PF01610)(mitochondrial)
243160.BMA1663+(plastid)
243160.BMA3032+plastid
243160.BMA0130(PF10908)(plastid)
243160.BMA0133(PF01610)(mitochondrial)
243160.BMAA1111+(PF10462)
243160.BMA0952+(mitochondrial)
243160.BMAA0712(+)ER
243160.BMA1230(PF01610)(mitochondrial)
243160.BMA1233(+)(PF01610)(mitochondrial)
243160.BMAA1213(PF01610)(mitochondrial)
243160.BMA0794(PF10908)(plastid)
243160.BMA2090(PF01610)(mitochondrial)
243160.BMA2097+plastid
243160.BMA2956(<)+
243160.BMA1037(+)mitochondrial
243160.BMA0384(+)(mitochondrial)
243160.BMAA2054(+)(ER); plastid
243160.BMA0366(+)(ER)
243160.BMAA1675+(PF10908)
243160.BMAA1279+(mitochondrial)
243160.BMA2438(PF01610)(mitochondrial)
243160.BMA0561+(plastid)
243160.BMA3327++
243160.BMAA0464(>)(plastid)
243160.BMA1016(PF01610)(mitochondrial)
243160.BMAA0057.1+(plastid)
243160.BMA1111(+)(mitochondrial); (plastid)
243160.BMA0502(+)(mitochondrial); (plastid)
243160.BMAA0810+plastid
243160.BMA3181(PF01610)(mitochondrial)
243160.BMAA1281(+)mitochondrial; plastid
243160.BMAA1299(+)(ER)
243160.BMA3388(+)+(plastid)
243160.BMAA1997+(PF12588)
243160.BMA1730+(plastid)
243160.BMAA1870+(mitochondrial)
243160.BMA1493+(plastid)
243160.BMAA0516+(mitochondrial)
243160.BMA1934(PF01610)(mitochondrial)
243160.BMA2520(>)(mitochondrial)
243160.BMAA2072(PF01610)(mitochondrial)
243160.BMAA0031(+)mitochondrial; (mitochondrial)
243160.BMA0470(PF01610)(mitochondrial)
243160.BMAA2028.1+(mitochondrial)
243160.BMAA1374+
243160.BMAA1377PF01527
243160.BMA2728(+)(plastid)
243160.BMAA0110(>)
243160.BMAA0682(+)+
243160.BMA0666+
243160.BMAA1790PF13683
243160.BMAA1085+
243160.BMAA2052+
243160.BMA0442PF01527
243160.BMAA0752(+)(plastid)
243160.BMA0709+
243160.BMA1986(+)plastid
243160.BMA3060+
243160.BMA0676PF05598
243160.BMAA1964+
243160.BMAA1968PF05598
243160.BMA3393PF01527
243160.BMA2477+
243160.BMA1479PF01527
243160.BMA0051PF05598
243160.BMA1503PF05598
243160.BMA1500PF05598
243160.BMAA0353+
243160.BMA2288(+)(plastid)
243160.BMA2284PF01527
243160.BMA2287+
243160.BMA2753PF05598
243160.BMA1891+
243160.BMAA0167+
243160.BMAA1565+
243160.BMAA1566+
243160.BMAA1368(PF10703)
243160.BMAA1788PF01527
243160.BMAA0414PF01527
243160.BMA2835PF01527
243160.BMA1271(PF08857)
243160.BMA1276+
243160.BMA0265PF01527
243160.BMAA1946PF01527
243160.BMA0454+
243160.BMAA0410+
243160.BMA1082PF01527
243160.BMA0111PF01527
243160.BMA2510+
243160.BMA3239PF05598
243160.BMA1513(+)(mitochondrial)
243160.BMA1450(<)
243160.BMAA0170PF05598
243160.BMAA0172+
243160.BMAA0175PF01527
243160.BMAA0177+
243160.BMAA1226PF01527
243160.BMA0848+
243160.BMAA0004+
243160.BMAA0400+
243160.BMA1265PF05598
243160.BMAA0794(PF11805)
243160.BMA1268(+)+
243160.BMAA2035+
243160.BMA2469+
243160.BMA1078PF01527
243160.BMA3002+
243160.BMA3007PF01527
243160.BMA0882+
243160.BMAA0788+
243160.BMA3134+
243160.BMA3139PF05598
243160.BMA2194(+)(mitochondrial)
243160.BMA2191+
243160.BMA2198PF01527
243160.BMA3352PF01527
243160.BMA0322PF01527
243160.BMAA0981+
243160.BMA0858PF01527
243160.BMAA0891PF01527
243160.BMA1982+
243160.BMAA1302+
243160.BMAA1121PF05598
243160.BMAA1124(+)plastid
243160.BMAA0437PF01527
243160.BMA1217PF01527
243160.BMA1215(>)
243160.BMAA2021+
243160.BMAA1055PF01527
243160.BMA1324+
243160.BMA1322+
243160.BMA2982PF05598
243160.BMA1661(+)plastid
243160.BMA1666(+)(mitochondrial)
243160.BMA2898PF01527
243160.BMA0271+
243160.BMA1689+
243160.BMA1685(+)plastid
243160.BMA2189+
243160.BMA2340PF05598
243160.BMA3216PF05598
243160.BMA0004PF01527
243160.BMAA0715(>)
243160.BMA3348(+)plastid
243160.BMA3361PF05598
243160.BMAA0556PF01527
243160.BMAA0551PF01527
243160.BMAA0082PF01527
243160.BMA2760PF01527
243160.BMA2767(+)(plastid)
243160.BMA2765+
243160.BMAA0332PF05598
243160.BMAA0886PF01527
243160.BMA1842PF01527
243160.BMA1848+
243160.BMAA1337+
243160.BMAA1687+
243160.BMA1204PF01527
243160.BMA0484PF01527
243160.BMA0488PF05598
243160.BMA2978(+)(>)
243160.BMA1122+
243160.BMA3025PF01527
243160.BMA3114+
243160.BMAA1850(+)plastid
243160.BMA2378+
243160.BMA3329(+)+
243160.BMA2086PF01527
243160.BMA1972+
243160.BMA0301+
243160.BMAA0528+
243160.BMAA0527+
243160.BMA2792PF01527
243160.BMA2790PF05598
243160.BMA3240+
243160.BMAA1307PF01527
243160.BMA0839(<)
243160.BMA2563PF05598
243160.BMA2896+
243160.BMA0496PF01527
243160.BMA0949PF01527
243160.BMA2418PF05598
243160.BMAA1588+
243160.BMA1307+not used
243160.BMAA1538+
243160.BMA1040PF01527
243160.BMA2912PF05598
243160.BMA0541(>)
243160.BMAA1865+
243160.BMA2362PF05598
243160.BMA1556(>)
243160.BMA2094+
243160.BMA3306+
243160.BMA0373+
243160.BMA1701+
243160.BMA2142+
243160.BMA0203+
243160.BMA0805PF01527
243160.BMAA0600+
243160.BMA1827(>)
243160.BMA1826(>)
243160.BMA2575(>)
243160.BMAA0991PF01527
243160.BMA1953PF01527
243160.BMA0973(+)+
243160.BMAA1004PF01527
243160.BMAA0846PF01527
243160.BMAA0376+
243160.BMAA1488+
243160.BMA0574PF01527
243160.BMA1494+
243160.BMA0585PF01527
243160.BMA0548+
243160.BMA2314+
243160.BMA1413+
243160.BMAA1642+
243160.BMA1760PF01527
243160.BMAA1646+
243160.BMA2227PF05598
243160.BMA2224PF01527
243160.BMA3319+
243160.BMA0362(<)
243160.BMAA0500+
243160.BMA2891+
243160.BMA0816(>)
243160.BMA2601+
243160.BMAA1499+
243160.BMA2047(+)(ER)
243160.BMA2044(+)(mitochondrial)
243160.BMA2043+
243160.BMAA0275PF01527
243160.BMAA1015+not used
243160.BMA2439+
243160.BMAA0878PF05598
243160.BMA1365+
243160.BMAA0870PF01527
243160.BMAA0872PF05598
243160.BMAA2115+
243160.BMAA2116PF05598
243160.BMAA2117(+)plastid
243160.BMAA1411PF01527
243160.BMA3143+
243160.BMA2521(>)
243160.BMAA1804PF05598
243160.BMA2529PF01527
243160.BMAA1869+
243160.BMA3092PF01527
243160.BMA3326(+)(plastid)
243160.BMA3322+
243160.BMA0353+
243160.BMA2565PF01527
243160.BMA0220+
243160.BMAA0608(+)(plastid)
243160.BMAA0605+
243160.BMA0132PF01527
243160.BMAA0286+
243160.BMAA1641+
243160.BMA1974PF01527
243160.BMAA1645PF01527
243160.BMAA1648+
243160.BMAA1248+
243160.BMAA1024PF01527
243160.BMAA0213+
243160.BMA2688PF01527
243160.BMA0510(>)
243160.BMA0517+
243160.BMA2596PF01527
243160.BMA2597(+)(ER)
243160.BMAA0265(>)
243160.BMA1162(>)
243160.BMA0429+
243160.BMA0426PF05598
243160.BMA2848(>)
243160.BMAA1296+
243160.BMA0161+
243160.BMA0168PF05598
243160.BMA0760+
243160.BMAA1693+
243160.BMA1585PF05598
243160.BMAA0568.1+
243160.BMA0697+
243160.BMA1742PF05598
243160.BMA2203+
243160.BMA3330+
243160.BMA3334+
243160.BMA0344(+)(plastid)
243160.BMA2116+
243160.BMAA0677+
243160.BMA2654PF01527
243160.BMAA1350+
243160.BMAA1669+
243160.BMA1871(+)plastid
243160.BMAA0498PF01527
243160.BMAA0738+
243160.BMAA1031+
243160.BMA1345+
243160.BMAA0812PF01527
243160.BMAA0212(>)
243160.BMA0501PF01527
243160.BMAA0925(+)(>)
243160.BMA0629(+)(>)
243160.BMA2895+
243160.BMA0755+
243160.BMA0758PF01527
243160.BMAA0445+
243160.BMAA0446+
243160.BMA1594+
243160.BMA1751+
243160.BMA1750+
243160.BMA3182PF05598
243160.BMA2817+not used
243160.BMAA0089+
243160.BMAA0661(+)(mitochondrial)
243160.BMAA0665+
243160.BMA2075+
243160.BMAA0249+
243160.BMAA0391+
243160.BMAA1532(PF07720)
243160.BMA2661(PF10703)
243160.BMAA2060(+)(plastid)
243160.BMA1136+
243160.BMAA1759PF01527
243160.BMA0530+
243160.BMAA0932+
243160.BMAA1487+
243160.BMA2482+
243160.BMA2481+
243160.BMAA1832+
243160.BMA2269PF01527
243160.BMA3196+
243160.BMA3193+
243160.BMAA1906+
243160.BMAA0655(<)not used
243160.BMAA0656+not used
243160.BMAA0651+
243160.BMAA0652(<)
243160.BMA0295.1(>)
243160.BMAA1909+
243160.BMA1295PF01527
243160.BMAA0725PF01527
243160.BMAA0728+
243160.BMAA0239+
243160.BMAA2091+
243160.BMA2904+
243160.BMAA1682(+)(plastid)
243160.BMAA1740PF01527
243160.BMAA0909+
243160.BMA2874+
243160.BMA2873+
243160.BMA1118PF01527
243160.BMA3336+
243160.BMA1498+
243160.BMAA0231(+)(plastid)
243160.BMA3291PF05598
243160.BMA0082PF05598
243160.BMAA1990+
243160.BMA1732(<)
243160.BMA1739PF05598
243160.BMA2278PF05598
243160.BMA1738+
243160.BMA1427+
243160.BMAA1978+
243160.BMA0524+
243160.BMAA0648PF01527
243160.BMA1338+
243160.BMAA0734(+)plastid
243160.BMAA0735+
243160.BMA2705(+)+
243160.BMAA1662+
243160.BMAA1513PF01527
243160.BMAA0823+
243160.BMAA1174PF01527
243160.BMAA0917PF01527
243160.BMA2803PF05598
243160.BMA2805(+)(plastid)
243160.BMAA2075PF05598
243160.BMAA2074PF01527
243160.BMAA2003+
243160.BMAA0314+not used
243160.BMA0729+
243160.BMA0728PF05598
243160.BMA0720PF01527
243160.BMAA2087+
243160.BMA3281+
243160.BMA3288+
243160.BMA1708(+)(>)
243160.BMA0659PF01527
243160.BMA0388PF05598
243160.BMA0381PF05598
243160.BMA1410PF01527
243160.BMAA0106PF01527
243160.BMAA0108+
243160.BMAA0219+
243160.BMAA0747+
243160.BMAA0196+
243160.BMAA0583PF01527
243160.BMA2731+
243160.BMAA1506PF05598
243160.BMAA1504PF01527
243160.BMA0898PF01527
243160.BMAA0691(PF08123)
243160.BMAA0697+
243160.BMA1256PF01527
243160.BMAA0057+
243160.BMAA0977+
243160.BMA1718PF05598
243160.BMAA1971+
243160.BMA1715PF05598
243160.BMA1938+
243160.BMA2250PF01527
243160.BMA1231PF01527
243160.BMA2258(>)
243160.BMA3387+
243160.BMA0285PF01527
243160.BMA3250+
243160.BMA3253+
243160.BMA0044(>)
243160.BMA2391+
243160.BMAA0750(+)
243160.BMAA1047(+)
243160.BMAA0594(+)
243160.BMA0934(+)
243160.BMAA0927(+)
243160.BMA1382(+)
243160.BMA0706(+)
243160.BMA0677(+)
243160.BMA0289(+)
243160.BMA0298(+)
243160.BMA0053(+)
243160.BMA0052(+)
243160.BMAA0379(+)
243160.BMAA0561(+)
243160.BMAA1492(+)
243160.BMA2637(+)
243160.BMAA1786(+)
243160.BMAA1149(+)
243160.BMA2524(+)
243160.BMAA0732(+)
243160.BMA1057(+)
243160.BMA0276(+)
243160.BMA3126(+)
243160.BMA3127(+)
243160.BMA1468(+)
243160.BMAA1444(+)
243160.BMA3234(+)
243160.BMA0024(+)
243160.BMAA0586(+)not used
243160.BMAA0178(+)not used
243160.BMA1887(+)
243160.BMA0840(+)
243160.BMAA1421(+)
243160.BMAA1424(+)
243160.BMA1676(+)
243160.BMA1671(+)
243160.BMA0611(+)
243160.BMA3132(+)
243160.BMA0100(+)
243160.BMA0262(+)not used
243160.BMA2350(+)
243160.BMA2399(+)
243160.BMAA1106(+)
243160.BMAA0324(+)
243160.BMAA1549(+)
243160.BMAA0439(+)
243160.BMA1060(+)
243160.BMA1482(+)
243160.BMA0001(+)
243160.BMA0003(+)
243160.BMAA0153(+)
243160.BMAA0158(+)
243160.BMA0946(+)
243160.BMAA1336(+)
243160.BMA1991(+)
243160.BMA1997(+)
243160.BMAA1681(+)
243160.BMAA2019(+)not used
243160.BMA1343(+)
243160.BMA1055(+)
243160.BMAA1929(+)
243160.BMA0630(+)
243160.BMAA1510(+)
243160.BMA3279(+)
243160.BMA3111(+)
243160.BMA0125(+)
243160.BMAA1854(+)
243160.BMA3247(+)
243160.BMA0382(+)
243160.BMAA1320(+)
243160.BMAA1459+
243160.BMAA0980(+)
243160.BMA1947(+)
243160.BMA2505(+)
243160.BMA1308(+)
243160.BMA2969(+)
243160.BMA2968(+)
243160.BMAA1914(+)
243160.BMAA1913(+)
243160.BMA0098(+)
243160.BMA2099(+)
243160.BMA0652(+)
243160.BMA0204(+)
243160.BMA1220(+)
243160.BMAA1262(+)
243160.BMAA1003(+)
243160.BMA2427(+)
243160.BMAA2102(+)
243160.BMA0781(+)
243160.BMA2318(+)
243160.BMA2315(+)
243160.BMA1568(+)
243160.BMA1569(+)
243160.BMA1565(+)
243160.BMA1566(+)
243160.BMA2804(+)
243160.BMA2913(+)
243160.BMAA0798(+)
243160.BMA2489(+)
243160.BMAA1531(+)
243160.BMA0214(+)not used
243160.BMA0819(+)
243160.BMAA1473(+)
243160.BMAA1478(+)
243160.BMAA1671(+)
243160.BMAA1276(+)
243160.BMA0965(+)
243160.BMA2435(+)
243160.BMA2434(+)
243160.BMAA0737(+)
243160.BMA1952(+)
243160.BMA1151(+)
243160.BMA1159(+)
243160.BMA1196(+)
243160.BMA0778(+)
243160.BMA1574(+)
243160.BMA0351(+)
243160.BMA0190(+)
243160.BMAA0040(+)
243160.BMA2124(+)
243160.BMA0223(+)
243160.BMA1448(+)
243160.BMAA0463(+)
243160.BMAA1025(+)
243160.BMAA1731(+)
243160.BMA0428(+)
243160.BMA3157(+)
243160.BMA0165(+)
243160.BMA0764(+)
243160.BMA2336(+)
243160.BMA1583(+)
243160.BMA3086(+)
243160.BMA3339(+)not used
243160.BMAA1661(+)
243160.BMAA1395(+)
243160.BMAA0702(+)
243160.BMAA1256(+)
243160.BMA0623(+)
243160.BMAA1038(+)
243160.BMAA1037(+)
243160.BMAA0924(+)
243160.BMA0438(+)
243160.BMAA1689(+)
243160.BMA2322(+)
243160.BMAA0122(+)
243160.BMA1313(+)
243160.BMA3188(+)
243160.BMA0618(+)
243160.BMAA0063(+)
243160.BMAA0482(+)
243160.BMAA0398(+)
243160.BMA1586(+)
243160.BMAA0331(+)
243160.BMA1614(+)
243160.BMAA1385(+)
243160.BMAA0900.1(+)
243160.BMA0537(+)
243160.BMA3194(+)
243160.BMA0818(+)
243160.BMA1787(+)
243160.BMA0255(+)not used
243160.BMAA0303(+)
243160.BMA2000(+)
243160.BMA0718(+)
243160.BMA2716(+)
243160.BMA2471(+)
243160.BMAA1298(+)
243160.BMA2906(+)
243160.BMA2679(+)
243160.BMAA0641(+)
243160.BMAA1744(+)
243160.BMA0415(+)
243160.BMA0733(+)
243160.BMA2883(+)
243160.BMAA1991(+)
243160.BMA2271(+)
243160.BMAA0002(+)
243160.BMA1333(+)
243160.BMAA1511(+)
243160.BMAA1517(+)
243160.BMA2646(+)
243160.BMAA0448(+)
243160.BMA3287(+)
243160.BMAA0933(+)
243160.BMA2395(+)
243160.BMA3262(+)
243160.BMAA1380(+)
243160.BMA1346(+)
243160.BMAA1342(+)
243160.BMAA0744(+)
243160.BMA3312(+)
243160.BMA1252(+)
243160.BMAA0403(+)
243160.BMA2925(+)
243160.BMA3384(+)
243160.BMAA0408(+)
243160.BMA2531(+)
243160.BMA2387(+)
243160.BMAA1974(+)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: YES (FDR = 12.5 %)
    Estimated copy number = 1.9 (19/10 KEGG proteins)
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0.0 (0/10 KEGG proteins)
  • Functional Type VI secretion system: YES (FDR = 7.7 %)
    Estimated copy number = 2.375 (19/8 KEGG proteins)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================