Metamenu

Effective results for Faecalibacterium cf. prausnitzii KLE1255 (eggnog40)

Summary

Number of putative secreted proteins: 96
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 17 eukaryotic-like domains, contained in 96 proteins (42 high, 54 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
748224.HMPREF9436_02358PF01131(mitochondrial)
748224.HMPREF9436_00033(PF01554)ER
748224.HMPREF9436_03225PF03432(mitochondrial)
748224.HMPREF9436_00587PF03432(mitochondrial)
748224.HMPREF9436_01669PF03432(mitochondrial)
748224.HMPREF9436_02185PF16994(mitochondrial)
748224.HMPREF9436_02899(PF01554)(ER); ER
748224.HMPREF9436_00545(PF01554)ER
748224.HMPREF9436_02601(PF00239)ER
748224.HMPREF9436_00809(PF12821)ER; (ER)
748224.HMPREF9436_00423(PF02446)(ER); (mitochondrial)
748224.HMPREF9436_02583(PF01554)ER; (ER)
748224.HMPREF9436_01753PF03432(mitochondrial)
748224.HMPREF9436_01734(PF01554)ER; (ER)
748224.HMPREF9436_00644(PF02446)ER
748224.HMPREF9436_00656(PF01554)ER
748224.HMPREF9436_01265(PF01554)(ER)
748224.HMPREF9436_03116(PF00239)(mitochondrial)
748224.HMPREF9436_01498PF05698 (PF05697)
748224.HMPREF9436_00185(PF01554)(ER)
748224.HMPREF9436_00745(PF00239)(mitochondrial)
748224.HMPREF9436_00727(PF05697) PF05698
748224.HMPREF9436_03127PF01624
748224.HMPREF9436_03120PF03432not used
748224.HMPREF9436_03138PF01131not used
748224.HMPREF9436_03134PF01131
748224.HMPREF9436_03137PF01131not used
748224.HMPREF9436_01525(PF01554)
748224.HMPREF9436_03222PF01624
748224.HMPREF9436_00325PF05698
748224.HMPREF9436_01213PF03432
748224.HMPREF9436_01666PF01131not used
748224.HMPREF9436_01843PF03432not used
748224.HMPREF9436_01990(PF01554)
748224.HMPREF9436_03117PF13151
748224.HMPREF9436_03111PF03432
748224.HMPREF9436_00789(PF01880)
748224.HMPREF9436_01837PF13151
748224.HMPREF9436_00833(PF07892)
748224.HMPREF9436_01231PF03432
748224.HMPREF9436_00499PF03432
748224.HMPREF9436_01308(PF03054)
748224.HMPREF9436_03300(PF12821)
748224.HMPREF9436_01955PF01131
748224.HMPREF9436_01950PF03432
748224.HMPREF9436_01227(PF00239)
748224.HMPREF9436_00286(PF00239)
748224.HMPREF9436_02429(PF12646)
748224.HMPREF9436_01784PF03432
748224.HMPREF9436_01786(PF00239)
748224.HMPREF9436_03176(PF00239)
748224.HMPREF9436_01762PF13151
748224.HMPREF9436_03317PF05698
748224.HMPREF9436_02049(PF07892)
748224.HMPREF9436_01799(PF01554)
748224.HMPREF9436_00179PF03432
748224.HMPREF9436_03142PF01131
748224.HMPREF9436_01775(PF00239)
748224.HMPREF9436_01975(PF00239)
748224.HMPREF9436_00998(PF03054)
748224.HMPREF9436_00518(PF01554)
748224.HMPREF9436_00168(PF01554)
748224.HMPREF9436_00769(PF00239)
748224.HMPREF9436_01742(PF00239)
748224.HMPREF9436_01902(PF01554)
748224.HMPREF9436_01904(PF00239)
748224.HMPREF9436_00504PF01131not used
748224.HMPREF9436_00750PF01624
748224.HMPREF9436_01750(PF12821)
748224.HMPREF9436_03183(PF01880)
748224.HMPREF9436_02076(PF01554)
748224.HMPREF9436_02860PF01624
748224.HMPREF9436_02862(PF01554)
748224.HMPREF9436_02489PF05698
748224.HMPREF9436_00257PF12873
748224.HMPREF9436_01923(PF00239)
748224.HMPREF9436_02719(PF00239)
748224.HMPREF9436_00730(PF01554)
748224.HMPREF9436_01608(PF00239)
748224.HMPREF9436_03054(PF00239)
748224.HMPREF9436_02278(PF01554)
748224.HMPREF9436_01936PF03432
748224.HMPREF9436_02704PF01131
748224.HMPREF9436_02705(PF00239)
748224.HMPREF9436_02733PF03432
748224.HMPREF9436_02654(PF00239)
748224.HMPREF9436_03250(PF01880)
748224.HMPREF9436_02627PF01131not used
748224.HMPREF9436_01242(PF00239)
748224.HMPREF9436_00440(PF02446)
748224.HMPREF9436_01472PF01624
748224.HMPREF9436_00055PF03432
748224.HMPREF9436_03249(PF02943)
748224.HMPREF9436_02750(PF00239)
748224.HMPREF9436_02637PF03432
748224.HMPREF9436_00903(PF03054)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================