Effective results for Mycoplasma alligatoris A21JP2 (eggnog40)

Summary

Number of putative secreted proteins: 13
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 6 eukaryotic-like domains, contained in 13 proteins (6 high, 7 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
747682.MALL_0358PF07555ER
747682.MALL_0675PF07555ER
747682.MALL_0459(PF04193)(mitochondrial)
747682.MALL_0841PF07555ER
747682.MALL_0840PF07555(ER)
747682.MALL_0237(PF04193)(ER)
747682.MALL_0241PF04275(mitochondrial)
747682.MALL_0674PF07555
747682.MALL_0524(PF01633)
747682.MALL_0239(PF11074)
747682.MALL_0837(PF04997)
747682.MALL_0838(PF04997)
747682.MALL_0175(PF01633)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================