Metamenu

Effective results for Granulicella mallensis MP5ACTX8 (eggnog40)

Summary

Number of putative secreted proteins: 382
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 65 eukaryotic-like domains, contained in 382 proteins (158 high, 224 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type VI

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
682795.AciX8_0968(PF16334) (PF16335) (PF17168) (PF08760)ER
682795.AciX8_3725(PF00703) (PF16355) (PF02837) (PF02836)ER
682795.AciX8_1122(PF00703) (PF16355) (PF02837) (PF02836)mitochondrial
682795.AciX8_3430(PF00703) (PF02837) (PF02836)mitochondrial; (mitochondrial)
682795.AciX8_2295(PF14686) PF06045 (PF14683)ER
682795.AciX8_3246(PF00703) (PF02837) (PF02836)(ER)
682795.AciX8_3828(PF00703) (PF02837) (PF02836)mitochondrial; (mitochondrial)
682795.AciX8_0889(PF00703) (PF02837) (PF02836)ER
682795.AciX8_3508(PF00703) (PF02837) (PF02836)(mitochondrial)
682795.AciX8_1956(PF00703) (PF02837) (PF02836)ER
682795.AciX8_1217(PF01431) (PF05649)ER
682795.AciX8_3580(PF16990) (PF16499)mitochondrial
682795.AciX8_3584(PF10282) (PF04185)ER
682795.AciX8_3465(PF14310) (PF01915)ER
682795.AciX8_4841(PF14310) (PF01915)ER
682795.AciX8_2502(PF14310) (PF01915)ER
682795.AciX8_4281(PF13802) (PF17137)ER
682795.AciX8_3677(PF01431) (PF05649)ER
682795.AciX8_2298(PF00703) (PF16355) (PF02837) (PF02836)
682795.AciX8_2297(PF00703) (PF16355) (PF02837) (PF02836)
682795.AciX8_1463(PF13802) (PF17137)ER
682795.AciX8_3813(PF00703) (PF02837) (PF02836)(mitochondrial)
682795.AciX8_0257(PF01431) (PF05649)ER
682795.AciX8_3603(PF13802) (PF17137)(mitochondrial); (plastid)
682795.AciX8_1661(PF14310) (PF01915)ER; (mitochondrial)
682795.AciX8_2662(PF00703) (PF02837) (PF02836)(ER)
682795.AciX8_4565(PF01431) (PF05649)ER
682795.AciX8_2399(PF14310) (PF01915)mitochondrial; (mitochondrial)
682795.AciX8_2482(PF14310) (PF01915)ER
682795.AciX8_0890(PF16875) (PF16874)ER
682795.AciX8_2235(PF00703) (PF02837) (PF02836)(mitochondrial)
682795.AciX8_2640(PF14310) (PF01915)ER
682795.AciX8_2642(PF14310) (PF01915)ER
682795.AciX8_3608(PF14310) (PF01915)ER
682795.AciX8_2438(PF16990) (PF16499)mitochondrial; (mitochondrial)
682795.AciX8_1614(PF13802) (PF17137)ER
682795.AciX8_1615(PF14310) (PF01915)(mitochondrial); plastid
682795.AciX8_0850(PF16875) (PF16874)ER
682795.AciX8_3505(PF00703) (PF16355) (PF02837) (PF02836)
682795.AciX8_3982(PF10282) (PF04185)ER
682795.AciX8_2689(PF14310) (PF01915)mitochondrial
682795.AciX8_3978(PF14310) (PF01915)ER
682795.AciX8_0037(PF06101)ER
682795.AciX8_1576PF13620ER
682795.AciX8_3315PF13620ER
682795.AciX8_0921PF09286ER
682795.AciX8_3228PF13620ER
682795.AciX8_2332PF13620ER
682795.AciX8_0816(PF03544)ER
682795.AciX8_0818(PF10282)ER
682795.AciX8_0965PF13620ER
682795.AciX8_0962PF13620ER
682795.AciX8_3718PF13620ER
682795.AciX8_3431(PF07971)(mitochondrial)
682795.AciX8_3439PF13620mitochondrial
682795.AciX8_3945(PF07731)mitochondrial; (mitochondrial)
682795.AciX8_3949(PF15780)ER
682795.AciX8_4018(PF16499)ER
682795.AciX8_4015PF13620ER
682795.AciX8_4013(PF10282)mitochondrial; (ER)
682795.AciX8_0796(PF02265)ER
682795.AciX8_3111PF09286ER; mitochondrial
682795.AciX8_0774PF07168ER
682795.AciX8_3238PF13620(ER); ER
682795.AciX8_3239(PF07971)(mitochondrial)
682795.AciX8_2326(PF17132)ER
682795.AciX8_2437PF13620ER
682795.AciX8_3123PF09286ER
682795.AciX8_4279PF13620ER
682795.AciX8_4313PF13620(mitochondrial)
682795.AciX8_3688PF13620ER
682795.AciX8_4007PF13620ER
682795.AciX8_3597PF13620ER
682795.AciX8_3594PF13620ER
682795.AciX8_1511PF13620(mitochondrial)
682795.AciX8_4869PF13620ER
682795.AciX8_4867PF13620ER
682795.AciX8_4860(PF05426)ER
682795.AciX8_2337PF13620mitochondrial
682795.AciX8_2331(PF00295)ER
682795.AciX8_3112(PF07971)ER
682795.AciX8_3117PF13620ER
682795.AciX8_3116PF07168ER
682795.AciX8_2520(PF07971)mitochondrial
682795.AciX8_2523PF13620mitochondrial
682795.AciX8_2522(PF00703)ER
682795.AciX8_3063PF09286ER
682795.AciX8_2633PF13620ER; mitochondrial
682795.AciX8_2632(PF04185)ER
682795.AciX8_3589PF13620ER
682795.AciX8_3218(PF10282)ER
682795.AciX8_3104PF09286mitochondrial
682795.AciX8_3109PF13620ER
682795.AciX8_1249(PF14534)mitochondrial; plastid
682795.AciX8_2537(PF13231)ER
682795.AciX8_4581PF13620ER
682795.AciX8_0264PF13620mitochondrial
682795.AciX8_3071PF09286ER
682795.AciX8_3074(PF16670)ER
682795.AciX8_3076PF13620ER
682795.AciX8_3148(PF07971)ER
682795.AciX8_4450PF13620mitochondrial
682795.AciX8_3463(PF01301)ER
682795.AciX8_3462PF13620ER
682795.AciX8_4067PF13620ER
682795.AciX8_4064(PF07731)ER
682795.AciX8_4065PF13620ER
682795.AciX8_1537(PF13231)ER
682795.AciX8_0108(PF13231)ER
682795.AciX8_3481(PF10282)(mitochondrial)
682795.AciX8_3487(PF01301)ER
682795.AciX8_4119(PF13231)ER
682795.AciX8_2913PF13620ER
682795.AciX8_1252(PF04185)(mitochondrial)
682795.AciX8_4590(PF03544)ER
682795.AciX8_4591PF13620ER
682795.AciX8_4284(PF05426)ER
682795.AciX8_0927PF13620ER
682795.AciX8_3716PF13620(ER)
682795.AciX8_3479PF13620ER
682795.AciX8_0421(PF14534)ER
682795.AciX8_0424PF13620ER
682795.AciX8_2473PF13620ER
682795.AciX8_2471(PF13231)mitochondrial
682795.AciX8_4616(PF01757)(ER); (mitochondrial)
682795.AciX8_1061PF13620ER; (ER)
682795.AciX8_1069(PF02265)ER
682795.AciX8_2271PF13620ER; (ER)
682795.AciX8_2278PF13620ER
682795.AciX8_3706PF13620ER
682795.AciX8_1913PF09286ER
682795.AciX8_2862PF11721ER
682795.AciX8_0120PF13620ER
682795.AciX8_2288PF13620ER
682795.AciX8_0706PF13620ER
682795.AciX8_2265PF13620ER
682795.AciX8_1279(PF11937)ER
682795.AciX8_3392(PF06414)(mitochondrial); (plastid)
682795.AciX8_4737PF13620ER
682795.AciX8_1890(PF04253)ER; (ER)
682795.AciX8_3814(PF07786)(mitochondrial); (plastid)
682795.AciX8_3812PF13620ER
682795.AciX8_0258(PF01757)mitochondrial
682795.AciX8_3818(PF11937)(mitochondrial)
682795.AciX8_1470(PF13231)ER
682795.AciX8_2073PF09286mitochondrial
682795.AciX8_2383(PF07731)ER
682795.AciX8_3252PF13620ER; (ER)
682795.AciX8_0402(PF01790)ER
682795.AciX8_4633PF13620mitochondrial; (mitochondrial)
682795.AciX8_4564(PF10282)ER
682795.AciX8_4563(PF10282)mitochondrial; (mitochondrial)
682795.AciX8_3823(PF07971)ER; (ER)
682795.AciX8_1441PF13620ER
682795.AciX8_4151(PF00295)ER
682795.AciX8_2936PF13620ER
682795.AciX8_4083PF13620ER
682795.AciX8_0093(PF07731)mitochondrial; (mitochondrial)
682795.AciX8_0095PF13620ER
682795.AciX8_1676(PF13231)ER
682795.AciX8_2488(PF16670)ER
682795.AciX8_2486(PF07971)mitochondrial
682795.AciX8_2487PF13620mitochondrial
682795.AciX8_0506PF13620ER
682795.AciX8_2244PF13620(ER)
682795.AciX8_0873PF13620ER
682795.AciX8_4579PF13620ER
682795.AciX8_4571(PF03544)(mitochondrial)
682795.AciX8_2904(PF16499)ER
682795.AciX8_2902PF13620ER
682795.AciX8_4364PF13620ER
682795.AciX8_0081(PF03544)(ER)
682795.AciX8_1608PF13620ER
682795.AciX8_2015(PF01229)ER
682795.AciX8_2010PF13620ER
682795.AciX8_0466(PF01757)ER
682795.AciX8_1118PF13620ER
682795.AciX8_1026(PF00163)mitochondrial; (mitochondrial)
682795.AciX8_2237PF13620ER
682795.AciX8_2231(PF07971)mitochondrial
682795.AciX8_2233PF11721ER
682795.AciX8_0881(PF17132)ER
682795.AciX8_3741PF09286ER
682795.AciX8_2731(PF13231)ER
682795.AciX8_0865PF13620ER
682795.AciX8_3607(PF01301)ER
682795.AciX8_3605PF13620ER
682795.AciX8_3604(PF01229)(mitochondrial); (plastid)
682795.AciX8_4502PF13620mitochondrial
682795.AciX8_2826PF13620ER
682795.AciX8_3515(PF01301)ER
682795.AciX8_3514PF13620ER
682795.AciX8_0267PF13620ER
682795.AciX8_3995PF13620(ER)
682795.AciX8_3998(PF04185)(mitochondrial)
682795.AciX8_1616PF13620mitochondrial
682795.AciX8_2134(PF07786)mitochondrial
682795.AciX8_0451(PF03544)ER
682795.AciX8_4774(PF16499)ER
682795.AciX8_4772PF13620ER
682795.AciX8_4773PF13620(ER)
682795.AciX8_0859(PF10282)ER
682795.AciX8_4517PF13620ER
682795.AciX8_2589(PF05426)mitochondrial
682795.AciX8_1583PF11721ER
682795.AciX8_2697(PF16990) (PF16499)(plastid)
682795.AciX8_2694PF13620ER; (ER)
682795.AciX8_2693PF13620ER; (ER)
682795.AciX8_1921PF13620ER
682795.AciX8_1926PF13620ER
682795.AciX8_4344(PF14534)ER
682795.AciX8_2030(PF10282)ER
682795.AciX8_2107PF13620ER
682795.AciX8_2214(PF04185)ER
682795.AciX8_4746PF13620mitochondrial; (mitochondrial)
682795.AciX8_2364PF13620mitochondrial
682795.AciX8_2360PF13620ER
682795.AciX8_0844PF13620mitochondrial
682795.AciX8_0847(PF00703)ER
682795.AciX8_3832PF13620ER
682795.AciX8_2020PF13620ER
682795.AciX8_1121(PF05426)mitochondrial
682795.AciX8_4821PF13620ER
682795.AciX8_2206PF13620ER
682795.AciX8_0545(PF04185)ER
682795.AciX8_0544(PF07731)ER; (mitochondrial)
682795.AciX8_1017PF09286ER
682795.AciX8_3082PF13620(ER)
682795.AciX8_4752(PF17137)ER
682795.AciX8_3792(PF00295)(ER); (mitochondrial)
682795.AciX8_3156PF13620ER; (ER)
682795.AciX8_0836(PF05426)ER
682795.AciX8_3560PF13620ER
682795.AciX8_3964PF13620ER
682795.AciX8_3965PF13620ER
682795.AciX8_2940(PF10282)(ER)
682795.AciX8_0049(PF05426)mitochondrial; (mitochondrial)
682795.AciX8_4033PF13620ER
682795.AciX8_1157PF11721ER
682795.AciX8_1156PF11721ER
682795.AciX8_2301(PF17132)ER
682795.AciX8_3149PF13620ER
682795.AciX8_0825(PF14534)ER
682795.AciX8_4786(PF14534)ER
682795.AciX8_0952PF13620ER
682795.AciX8_4258(PF01229)ER
682795.AciX8_4254PF13620ER
682795.AciX8_4256PF13620mitochondrial
682795.AciX8_4338(PF03544)ER
682795.AciX8_1977(PF00295)mitochondrial; (mitochondrial)
682795.AciX8_2957PF13620(mitochondrial); ER
682795.AciX8_3428(PF16499)ER
682795.AciX8_3426PF13620ER
682795.AciX8_3425PF13620ER
682795.AciX8_0147PF13620(ER)
682795.AciX8_3313(PF13231)(mitochondrial)
682795.AciX8_2312(PF16499)(plastid)
682795.AciX8_3133PF13620(ER)
682795.AciX8_0779(PF04185)(ER)
682795.AciX8_2325PF13620(mitochondrial)
682795.AciX8_2559(PF01757)(mitochondrial)
682795.AciX8_4124(PF00163)(mitochondrial)
682795.AciX8_2512PF13620(mitochondrial)
682795.AciX8_4432(PF09752)(mitochondrial)
682795.AciX8_4555(PF01757)plastid
682795.AciX8_4896PF13620(plastid)
682795.AciX8_4086PF13620plastid
682795.AciX8_2242(PF10282)(ER)
682795.AciX8_0887PF13620(mitochondrial)
682795.AciX8_0674PF09286plastid
682795.AciX8_2133(PF03544)(mitochondrial)
682795.AciX8_2696(PF16875) (PF16874)
682795.AciX8_2263(PF01229)(ER)
682795.AciX8_3182(PF02971) (PF07837)
682795.AciX8_4741(PF01757)(plastid)
682795.AciX8_0846PF13620(ER)
682795.AciX8_1848PF07460(mitochondrial)
682795.AciX8_3155(PF11523)(mitochondrial)
682795.AciX8_0950PF13620(ER)
682795.AciX8_2561(PF01757)(plastid)
682795.AciX8_3567(PF12222)(ER)
682795.AciX8_4326PF13620(plastid)
682795.AciX8_2948(PF00201)(plastid)
682795.AciX8_4020PF13620
682795.AciX8_4696(PF03544)
682795.AciX8_1148(PF07786)
682795.AciX8_0561PF13620
682795.AciX8_3225(PF00201)
682795.AciX8_3226(PF13936)
682795.AciX8_2403(PF01790)
682795.AciX8_2549PF13620
682795.AciX8_2548(PF05426)
682795.AciX8_4792(PF00201)
682795.AciX8_2544(PF00190)
682795.AciX8_0967(PF07786)
682795.AciX8_0960PF13620
682795.AciX8_2898PF13620
682795.AciX8_3432PF13620
682795.AciX8_3943(PF00070)
682795.AciX8_4012PF13620
682795.AciX8_0773(PF16401)
682795.AciX8_2328(PF00295)
682795.AciX8_4474(PF13231)
682795.AciX8_3443(PF07731)
682795.AciX8_1992(PF01757)
682795.AciX8_3933(PF01757)
682795.AciX8_0011(PF00190)
682795.AciX8_3456(PF00201)
682795.AciX8_2639(PF01757)
682795.AciX8_0008PF13620
682795.AciX8_4109(PF16401)
682795.AciX8_1430(PF13936)
682795.AciX8_4106PF11721
682795.AciX8_1244(PF03544)
682795.AciX8_4583(PF01757)
682795.AciX8_4589(PF01757)
682795.AciX8_4297PF13620
682795.AciX8_2628(PF01757)
682795.AciX8_2849(PF15780)
682795.AciX8_4117PF13620
682795.AciX8_1744(PF14534)
682795.AciX8_3261PF15636
682795.AciX8_2501PF13620
682795.AciX8_2507(PF04185)
682795.AciX8_4288(PF06414)
682795.AciX8_4054(PF00201)
682795.AciX8_1419(PF13936)
682795.AciX8_2053(PF14534)
682795.AciX8_2296PF13620
682795.AciX8_3278(PF13668)
682795.AciX8_1398(PF01757)
682795.AciX8_2470(PF00190)
682795.AciX8_1889(PF03544)
682795.AciX8_1091(PF14534)
682795.AciX8_0458(PF13936)
682795.AciX8_3245PF13620
682795.AciX8_4427PF13620
682795.AciX8_1474(PF01757)
682795.AciX8_1663(PF01757)
682795.AciX8_3257PF13620
682795.AciX8_2493(PF13668)
682795.AciX8_2492(PF13668)
682795.AciX8_3034PF13620
682795.AciX8_3820(PF13668)
682795.AciX8_3827(PF05153)
682795.AciX8_1702(PF05495)
682795.AciX8_0092(PF04185)
682795.AciX8_0091(PF01790)
682795.AciX8_1677(PF13231)
682795.AciX8_2398(PF13231)
682795.AciX8_1056(PF01790)
682795.AciX8_4403(PF03544)
682795.AciX8_4162(PF04185)
682795.AciX8_4167(PF01757)
682795.AciX8_4166(PF01757)
682795.AciX8_2011PF13620
682795.AciX8_2013(PF07786)
682795.AciX8_1339(PF03544)
682795.AciX8_4174PF00179
682795.AciX8_4171(PF01757)
682795.AciX8_0078(PF00295)
682795.AciX8_0077PF13620
682795.AciX8_2005(PF13936)
682795.AciX8_2741(PF13936)
682795.AciX8_2749(PF14792)
682795.AciX8_2588PF13620
682795.AciX8_3983PF13620
682795.AciX8_0688(PF13231)
682795.AciX8_2215(PF07731)
682795.AciX8_2207(PF07971)
682795.AciX8_2560(PF01757)
682795.AciX8_2563(PF01757)
682795.AciX8_2564(PF01757)
682795.AciX8_2788(PF13936)
682795.AciX8_1155PF11721
682795.AciX8_1371(PF00703)
682795.AciX8_2411(PF03544)
682795.AciX8_2579(PF01757)
682795.AciX8_4789(PF00201)
682795.AciX8_2575(PF01757)
682795.AciX8_4257(PF01229)
682795.AciX8_3429(PF00295)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: YES (FDR = 7.7 %)
    Estimated copy number = 1.625 (13/8 KEGG proteins)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================