Metamenu

Effective results for Faecalibacterium prausnitzii SL3/3 (eggnog40)

Summary

Number of putative secreted proteins: 78
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 17 eukaryotic-like domains, contained in 78 proteins (11 high, 67 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
657322.FPR_21900(PF06541)(ER); ER
657322.FPR_28220(PF01554)ER
657322.FPR_04440(PF03432)(mitochondrial)
657322.FPR_25740(PF01554)ER
657322.FPR_25620(PF06541)ER
657322.FPR_08830(PF01554)ER
657322.FPR_23120(PF09511)(mitochondrial)
657322.FPR_18840(PF03432)(mitochondrial)
657322.FPR_12500PF16994(mitochondrial)
657322.FPR_08660(PF01554)(ER)
657322.FPR_06050(PF01554)ER
657322.FPR_12670(PF01554)ER; (ER)
657322.FPR_19180(PF03432)(mitochondrial); mitochondrial
657322.FPR_01580(PF03432)(ER)
657322.FPR_25070PF01807(plastid)
657322.FPR_09440(PF05697) (PF05698)
657322.FPR_31270(PF05697) (PF05698)
657322.FPR_08390PF01807(ER)
657322.FPR_20450PF01807(plastid)
657322.FPR_08740(PF01554)(mitochondrial)
657322.FPR_28830(PF01554)(ER)
657322.FPR_10060(PF06541)(ER)
657322.FPR_01300(PF00239)(mitochondrial)
657322.FPR_21580(PF03054)
657322.FPR_01670(PF00239)
657322.FPR_06860(PF01880)
657322.FPR_17480(PF01554)
657322.FPR_14260PF01807
657322.FPR_15130(PF00239)
657322.FPR_13150(PF00239)
657322.FPR_18960(PF00239)
657322.FPR_00230(PF00239)
657322.FPR_10320(PF03432)
657322.FPR_10890(PF00239)
657322.FPR_19770(PF01554)
657322.FPR_31040(PF03054)
657322.FPR_10330PF01807
657322.FPR_06620(PF01554)
657322.FPR_02990(PF05698)
657322.FPR_15200(PF00239)
657322.FPR_14360(PF03432)
657322.FPR_15760(PF03054)
657322.FPR_03210(PF03432)
657322.FPR_11000(PF00239)
657322.FPR_23970(PF00239)
657322.FPR_12290(PF01554)
657322.FPR_16100(PF00239)
657322.FPR_01190(PF03432)
657322.FPR_02640(PF04432)
657322.FPR_29670PF01807
657322.FPR_14140(PF00239)
657322.FPR_03900(PF09419)
657322.FPR_10860PF01807
657322.FPR_24760(PF00239)
657322.FPR_22390PF05183
657322.FPR_13090PF01807
657322.FPR_25010(PF00239)
657322.FPR_01350(PF01554)
657322.FPR_19390(PF04432)
657322.FPR_01460(PF00239)
657322.FPR_24020PF01807
657322.FPR_00780(PF00239)
657322.FPR_18390(PF01554)
657322.FPR_03320(PF00239)
657322.FPR_08650(PF00239)
657322.FPR_12270(PF05698)
657322.FPR_08010(PF00239)
657322.FPR_20510(PF00239)
657322.FPR_21860(PF01487)
657322.FPR_03450(PF01554)
657322.FPR_27980(PF01554)
657322.FPR_16990(PF00239)not used
657322.FPR_07330(PF01880)
657322.FPR_01480(PF13151)
657322.FPR_25900(PF12646)
657322.FPR_01000(PF01487)
657322.FPR_17830(PF01554)
657322.FPR_19560(PF00239)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================