Metamenu

Effective results for Anaerobaculum hydrogeniformans ATCC BAA-1850 (eggnog40)

Summary

Number of putative secreted proteins: 123
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 40 eukaryotic-like domains, contained in 123 proteins (30 high, 93 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
592015.HMPREF1705_02463(PF09370)(mitochondrial)
592015.HMPREF1705_00832(PF00137)ER
592015.HMPREF1705_00163(PF03266)mitochondrial
592015.HMPREF1705_01203PF14336(mitochondrial)
592015.HMPREF1705_02417(PF00137)ER
592015.HMPREF1705_01681(PF09370)(mitochondrial)
592015.HMPREF1705_01194(PF00977)(mitochondrial)
592015.HMPREF1705_01242(PF02655)mitochondrial; (mitochondrial)
592015.HMPREF1705_00442(PF14330)(mitochondrial)
592015.HMPREF1705_02173(PF02655)mitochondrial; (mitochondrial)
592015.HMPREF1705_00892(PF01610)mitochondrial
592015.HMPREF1705_00943(PF00137)ER
592015.HMPREF1705_00707(PF01610)mitochondrial; (mitochondrial)
592015.HMPREF1705_02531(PF00137)ER
592015.HMPREF1705_02046(PF00137)ER
592015.HMPREF1705_00826PF01813mitochondrial
592015.HMPREF1705_02190(PF10143)(ER)
592015.HMPREF1705_00939(PF02874) PF16886
592015.HMPREF1705_00938(PF02874)(mitochondrial)
592015.HMPREF1705_00789(PF05970) (PF02689)
592015.HMPREF1705_01651(PF01513)(mitochondrial)
592015.HMPREF1705_01070(PF07837) (PF02971)
592015.HMPREF1705_00195(PF01558) (PF01855)
592015.HMPREF1705_00987(PF01148)(ER)
592015.HMPREF1705_02218(PF01558) (PF01855)
592015.HMPREF1705_02486(PF02874) PF16886
592015.HMPREF1705_00944PF01496(mitochondrial)
592015.HMPREF1705_01545(PF01855)(mitochondrial)
592015.HMPREF1705_02528(PF03652)(ER)
592015.HMPREF1705_02049(PF02874) PF16886
592015.HMPREF1705_00828(PF02874) PF16886
592015.HMPREF1705_01965(PF02548)
592015.HMPREF1705_02465PF01502
592015.HMPREF1705_02464(PF00977)not used
592015.HMPREF1705_02467(PF08459)not used
592015.HMPREF1705_02466PF01502not used
592015.HMPREF1705_02469(PF06421)not used
592015.HMPREF1705_00616(PF02548)
592015.HMPREF1705_00610(PF02548)
592015.HMPREF1705_02050(PF02874)
592015.HMPREF1705_00830PF01992
592015.HMPREF1705_00831(PF01991)
592015.HMPREF1705_00833PF01496
592015.HMPREF1705_01571(PF10143)
592015.HMPREF1705_02503(PF05970)
592015.HMPREF1705_00751(PF06421)
592015.HMPREF1705_02475(PF02410)not used
592015.HMPREF1705_00937PF01813
592015.HMPREF1705_02263(PF01930)
592015.HMPREF1705_01508(PF02874)
592015.HMPREF1705_02092(PF11074)
592015.HMPREF1705_00484(PF02655)
592015.HMPREF1705_00258(PF01512)
592015.HMPREF1705_00643(PF01610)
592015.HMPREF1705_00480(PF00977)
592015.HMPREF1705_00796(PF02410)
592015.HMPREF1705_00133(PF01902)
592015.HMPREF1705_00001(PF01268)not used
592015.HMPREF1705_00314(PF01855)
592015.HMPREF1705_00317(PF14330)
592015.HMPREF1705_00313(PF01558)
592015.HMPREF1705_02420(PF00977)
592015.HMPREF1705_01784(PF01512)
592015.HMPREF1705_01654(PF01512)
592015.HMPREF1705_01530(PF01558)
592015.HMPREF1705_01531(PF01855)
592015.HMPREF1705_00018(PF01610)not used
592015.HMPREF1705_02430(PF01148)not used
592015.HMPREF1705_02431(PF01148)not used
592015.HMPREF1705_00662(PF00755)
592015.HMPREF1705_01195PF01502
592015.HMPREF1705_01197(PF04008)
592015.HMPREF1705_01193(PF00977)
592015.HMPREF1705_00688(PF02548)
592015.HMPREF1705_00141(PF01930)
592015.HMPREF1705_00066(PF01930)
592015.HMPREF1705_00518(PF01610)
592015.HMPREF1705_00941PF01992
592015.HMPREF1705_00477(PF01513)
592015.HMPREF1705_01060(PF01855)
592015.HMPREF1705_02348(PF04008)
592015.HMPREF1705_02345PF14336
592015.HMPREF1705_01058(PF01558)
592015.HMPREF1705_02216(PF01855)not used
592015.HMPREF1705_02214(PF01558)not used
592015.HMPREF1705_00054(PF01512)
592015.HMPREF1705_01135(PF01268)
592015.HMPREF1705_00428(PF01610)
592015.HMPREF1705_02364(PF03726)not used
592015.HMPREF1705_00954(PF08459)
592015.HMPREF1705_02487PF01990not used
592015.HMPREF1705_02390(PF01513)not used
592015.HMPREF1705_01851(PF01512)
592015.HMPREF1705_02555PF01992
592015.HMPREF1705_02554PF01502not used
592015.HMPREF1705_00894(PF01610)
592015.HMPREF1705_00893(PF01610)
592015.HMPREF1705_00899(PF01513)
592015.HMPREF1705_01700(PF01610)
592015.HMPREF1705_02496PF01813not used
592015.HMPREF1705_02545(PF01512)
592015.HMPREF1705_02542PF01992not used
592015.HMPREF1705_00973(PF03652)
592015.HMPREF1705_01543(PF01558)
592015.HMPREF1705_00578(PF01610)
592015.HMPREF1705_00701(PF01268)
592015.HMPREF1705_02538(PF01512)not used
592015.HMPREF1705_02532PF01496not used
592015.HMPREF1705_02443PF00312
592015.HMPREF1705_00965(PF01855)
592015.HMPREF1705_00963(PF01558)
592015.HMPREF1705_01176PF00312
592015.HMPREF1705_01175(PF03726)
592015.HMPREF1705_02425PF01813not used
592015.HMPREF1705_02453(PF01148)not used
592015.HMPREF1705_02043PF03179
592015.HMPREF1705_02042PF01813
592015.HMPREF1705_02047PF01990
592015.HMPREF1705_02045PF01496
592015.HMPREF1705_02044PF01992
592015.HMPREF1705_00827(PF02874)
592015.HMPREF1705_00829PF01990
592015.HMPREF1705_02287(PF01902)not used

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================