Metamenu

Effective results for Erysipelotrichaceae bacterium 5_2_54FAA (eggnog40)

Summary

Number of putative secreted proteins: 118
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 27 eukaryotic-like domains, contained in 118 proteins (22 high, 96 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
552396.HMPREF0863_00518(PF00359)(ER)
552396.HMPREF0863_01074(PF08282)(mitochondrial)
552396.HMPREF0863_00844(PF11070)ER
552396.HMPREF0863_01906PF05738ER
552396.HMPREF0863_00513PF05738ER
552396.HMPREF0863_02578(PF12972) (PF12971) (PF05089)
552396.HMPREF0863_01587PF05738(ER)
552396.HMPREF0863_01908PF05738ER
552396.HMPREF0863_02170(PF01238)(mitochondrial)
552396.HMPREF0863_02169(PF08282)ER
552396.HMPREF0863_02839PF05738ER
552396.HMPREF0863_01156PF05738(mitochondrial)
552396.HMPREF0863_02844PF05738ER
552396.HMPREF0863_01386(PF00359)(ER)
552396.HMPREF0863_02857PF05738(ER)
552396.HMPREF0863_01910(PF13306)ER
552396.HMPREF0863_01342PF05738ER
552396.HMPREF0863_01358(PF05257)ER
552396.HMPREF0863_01193(PF13306)ER
552396.HMPREF0863_00247PF05738ER
552396.HMPREF0863_02266PF05738ER
552396.HMPREF0863_02402(PF12972) (PF12971) (PF05089)
552396.HMPREF0863_02311(PF05257)ER
552396.HMPREF0863_02327(PF01228) (PF02901)
552396.HMPREF0863_02126(PF01238)(ER)
552396.HMPREF0863_01802(PF01228) (PF02901)
552396.HMPREF0863_01476(PF01228) (PF02901)
552396.HMPREF0863_02156(PF01238)(mitochondrial)
552396.HMPREF0863_01378(PF01228) (PF02901)
552396.HMPREF0863_02463(PF03266)(mitochondrial)
552396.HMPREF0863_01218(PF01228) (PF02901)
552396.HMPREF0863_02274(PF08282)
552396.HMPREF0863_01687(PF08282)
552396.HMPREF0863_01312(PF06777)
552396.HMPREF0863_01651(PF05257)
552396.HMPREF0863_00515(PF13306)
552396.HMPREF0863_02658(PF05076)
552396.HMPREF0863_02652(PF00359)
552396.HMPREF0863_02653(PF00359)
552396.HMPREF0863_02651(PF00359)
552396.HMPREF0863_02430(PF13306)
552396.HMPREF0863_02323PF02037
552396.HMPREF0863_01223(PF02485)
552396.HMPREF0863_00516PF05738
552396.HMPREF0863_00519(PF01238)
552396.HMPREF0863_02227(PF00359)
552396.HMPREF0863_02228(PF00359)
552396.HMPREF0863_01494(PF01116)
552396.HMPREF0863_01491(PF13580)
552396.HMPREF0863_01493(PF01116)
552396.HMPREF0863_02128(PF08282)
552396.HMPREF0863_02125(PF08282)
552396.HMPREF0863_02127(PF08282)
552396.HMPREF0863_01807(PF08282)
552396.HMPREF0863_01907PF05738not used
552396.HMPREF0863_01586PF05738
552396.HMPREF0863_01585PF05738
552396.HMPREF0863_01610(PF08282)
552396.HMPREF0863_01616(PF00359)
552396.HMPREF0863_01120(PF02421)
552396.HMPREF0863_00050(PF01116)
552396.HMPREF0863_01723(PF00359)
552396.HMPREF0863_00236(PF00438)
552396.HMPREF0863_02580(PF13306)
552396.HMPREF0863_00526(PF01116)
552396.HMPREF0863_00520(PF00359)not used
552396.HMPREF0863_00521(PF00359)
552396.HMPREF0863_01268(PF12646)
552396.HMPREF0863_00086(PF08282)
552396.HMPREF0863_00555PF05738
552396.HMPREF0863_00554PF05738
552396.HMPREF0863_02004(PF13306)not used
552396.HMPREF0863_01925(PF01116)
552396.HMPREF0863_01924(PF00359)
552396.HMPREF0863_01927(PF00359)
552396.HMPREF0863_00439(PF05257)
552396.HMPREF0863_02766(PF08282)
552396.HMPREF0863_02499(PF05076)
552396.HMPREF0863_02160(PF08282)
552396.HMPREF0863_02382(PF00958)
552396.HMPREF0863_02159(PF08282)
552396.HMPREF0863_02840(PF13306)
552396.HMPREF0863_02846(PF13306)
552396.HMPREF0863_01385(PF00359)
552396.HMPREF0863_01381(PF01116)
552396.HMPREF0863_01382(PF13580)
552396.HMPREF0863_01303(PF01991)
552396.HMPREF0863_00366(PF08282)
552396.HMPREF0863_02149(PF02485)
552396.HMPREF0863_02455(PF08282)
552396.HMPREF0863_01427(PF00438)
552396.HMPREF0863_02852PF05738not used
552396.HMPREF0863_01881(PF13306)
552396.HMPREF0863_01392(PF13580)
552396.HMPREF0863_01391(PF13580)
552396.HMPREF0863_01917(PF08282)
552396.HMPREF0863_00779(PF08282)
552396.HMPREF0863_00350(PF00438)
552396.HMPREF0863_02192(PF08282)
552396.HMPREF0863_01968(PF00958)
552396.HMPREF0863_01411(PF16158)
552396.HMPREF0863_02863(PF13306)
552396.HMPREF0863_02868PF05738not used
552396.HMPREF0863_00612(PF05076)
552396.HMPREF0863_02188(PF08282)
552396.HMPREF0863_02186(PF08282)
552396.HMPREF0863_02503(PF02421)
552396.HMPREF0863_02053(PF08282)
552396.HMPREF0863_02054(PF08282)
552396.HMPREF0863_02505PF14853
552396.HMPREF0863_01401(PF13580)
552396.HMPREF0863_02877(PF13306)
552396.HMPREF0863_02878PF05738not used
552396.HMPREF0863_01998(PF00359)
552396.HMPREF0863_01197(PF02421)
552396.HMPREF0863_00119(PF00359)
552396.HMPREF0863_01692(PF11074)
552396.HMPREF0863_01506(PF02421)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================