Effective results for Kosmotoga olearia TBF 19.5.1 (eggnog40)

Summary

Number of putative secreted proteins: 61
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 16 eukaryotic-like domains, contained in 61 proteins (2 high, 59 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
521045.Kole_1797(PF00665)(mitochondrial)
521045.Kole_1238(PF00665)mitochondrial; (mitochondrial)
521045.Kole_2021(PF00162)(mitochondrial)
521045.Kole_0333(PF00665)mitochondrial; (mitochondrial)
521045.Kole_0518(PF12483)ER
521045.Kole_1019(PF01695)(mitochondrial); mitochondrial
521045.Kole_1047(PF01695)(mitochondrial); mitochondrial
521045.Kole_0231(PF13173)ER
521045.Kole_1051(PF01695)(mitochondrial); mitochondrial
521045.Kole_0482(PF16317)ER
521045.Kole_1293(PF00665)(mitochondrial)
521045.Kole_1080(PF10142)ER
521045.Kole_0057(PF01695)(mitochondrial); mitochondrial
521045.Kole_1504(PF00665)(mitochondrial)
521045.Kole_0784(PF00665)(plastid)
521045.Kole_1787(PF00665)(ER)
521045.Kole_0066(PF00665)(mitochondrial)
521045.Kole_0628(PF00665)(plastid)
521045.Kole_0766(PF00665)(plastid)
521045.Kole_0490(PF01637)(mitochondrial)
521045.Kole_1720(PF07837) (PF02971)
521045.Kole_0260PF12719
521045.Kole_1317(PF13173)
521045.Kole_1136(PF00665)
521045.Kole_1259(PF13173)
521045.Kole_1796(PF01695)
521045.Kole_1824(PF00665)
521045.Kole_0079(PF13173)
521045.Kole_0073(PF13173)
521045.Kole_0074(PF13173)
521045.Kole_1301(PF01637)
521045.Kole_1300(PF01637)
521045.Kole_0525(PF00665)
521045.Kole_0526(PF01695)
521045.Kole_0069(PF13173)
521045.Kole_0065(PF01695)
521045.Kole_1423(PF00665)
521045.Kole_1426(PF01695)
521045.Kole_1427(PF00665)
521045.Kole_0335(PF00665)
521045.Kole_2006(PF13173)
521045.Kole_2008(PF01637)
521045.Kole_0364(PF00665)
521045.Kole_1018(PF00665)
521045.Kole_0995(PF00162)
521045.Kole_1146(PF03266)
521045.Kole_1048(PF00665)
521045.Kole_0976(PF09752)
521045.Kole_1825(PF00665)
521045.Kole_0237(PF09419)
521045.Kole_1052(PF00665)
521045.Kole_1948PF12765
521045.Kole_1069(PF00862)
521045.Kole_1294(PF01695)
521045.Kole_1279(PF01695)
521045.Kole_1278(PF00665)
521045.Kole_1670(PF00665)
521045.Kole_1505(PF00665)
521045.Kole_1507(PF01695)
521045.Kole_1506(PF01695)
521045.Kole_0058(PF00665)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================