Effective results for Fusobacterium gonidiaformans ATCC 25563 (eggnog40)

Summary

Number of putative secreted proteins: 9
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 5 eukaryotic-like domains, contained in 9 proteins (2 high, 7 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
469615.FGAG_00570(PF07837) (PF02971)
469615.FGAG_00514(PF08011) (PF09820)
469615.FGAG_00017(PF08011) (PF09820)
469615.FGAG_00018(PF08011) (PF09820)
469615.FGAG_00662(PF08011) (PF09820)
469615.FGAG_00140(PF08011) (PF09820)
469615.FGAG_00090(PF08011) (PF09820)
469615.FGAG_00126PF06176
469615.FGAG_00847PF06176

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================