Metamenu

Effective results for Erysipelatoclostridium ramosum DSM 1402 (eggnog40)

Summary

Number of putative secreted proteins: 246
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 33 eukaryotic-like domains, contained in 246 proteins (132 high, 114 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
445974.CLORAM_03009PF01418 (PF01380)(mitochondrial); mitochondrial
445974.CLORAM_01901PF01418 (PF01380)ER
445974.CLORAM_00410PF01418 (PF01380)(mitochondrial)
445974.CLORAM_02370(PF02690)ER
445974.CLORAM_00947(PF12832)(mitochondrial)
445974.CLORAM_01886PF01418 (PF01380)(mitochondrial)
445974.CLORAM_02993(PF02690)ER; (ER)
445974.CLORAM_01401(PF01554)ER
445974.CLORAM_03023PF01418(ER)
445974.CLORAM_02645(PF12832)ER
445974.CLORAM_00823PF01418 (PF01380)(mitochondrial)
445974.CLORAM_00820(PF16403)ER
445974.CLORAM_00904PF08282(mitochondrial)
445974.CLORAM_02651(PF16403)ER; (ER)
445974.CLORAM_01527(PF01554)ER
445974.CLORAM_02099(PF11070)ER
445974.CLORAM_00240(PF02357)(mitochondrial)
445974.CLORAM_02790(PF01554)ER
445974.CLORAM_01750(PF16403)ER
445974.CLORAM_00938(PF00367)ER
445974.CLORAM_01038(PF16403)ER
445974.CLORAM_00472(PF12832)ER
445974.CLORAM_01027(PF16656)ER
445974.CLORAM_00682(PF00367)ER
445974.CLORAM_00869(PF02357)(mitochondrial); mitochondrial
445974.CLORAM_02690(PF01554)(ER)
445974.CLORAM_00209PF00232(mitochondrial)
445974.CLORAM_01712PF01418(ER)
445974.CLORAM_01674(PF01554)mitochondrial
445974.CLORAM_02125(PF12832)(ER)
445974.CLORAM_00408(PF01554)ER
445974.CLORAM_02711(PF02690)ER
445974.CLORAM_02625(PF00367)ER
445974.CLORAM_00091(PF00365)mitochondrial; (mitochondrial)
445974.CLORAM_00095(PF01121)(mitochondrial)
445974.CLORAM_00522PF00232(mitochondrial); mitochondrial
445974.CLORAM_00520(PF00367)(mitochondrial)
445974.CLORAM_02568(PF07555)(ER)
445974.CLORAM_02566(PF00367)(mitochondrial)
445974.CLORAM_02703PF08282(mitochondrial)
445974.CLORAM_00899(PF01554)(ER); ER
445974.CLORAM_00779PF01418ER; (ER)
445974.CLORAM_00953PF01418(ER); (mitochondrial)
445974.CLORAM_00954(PF04794)ER
445974.CLORAM_00381PF01418 (PF01380)
445974.CLORAM_01891PF01418 (PF01380)
445974.CLORAM_02803PF01418 (PF01380)
445974.CLORAM_01981(PF01795)(mitochondrial)
445974.CLORAM_00592PF01418(ER)
445974.CLORAM_02849PF01418(ER)
445974.CLORAM_00563PF01418 (PF01380)
445974.CLORAM_01188PF08282(plastid)
445974.CLORAM_02670PF01418 (PF01380)
445974.CLORAM_01991PF01418(ER)
445974.CLORAM_00135(PF12464) PF08282
445974.CLORAM_00136(PF12832)(ER)
445974.CLORAM_00821PF01418 (PF01380)
445974.CLORAM_00344PF01418 (PF01380)
445974.CLORAM_01743PF01418 (PF01380)
445974.CLORAM_01744PF01418 (PF01380)
445974.CLORAM_00930PF01418 (PF01380)
445974.CLORAM_01684(PF00367)(mitochondrial)
445974.CLORAM_01813PF01418 (PF01380)
445974.CLORAM_00471PF01418 (PF01380)
445974.CLORAM_03078PF00232(mitochondrial)
445974.CLORAM_00780PF01418 (PF01380)
445974.CLORAM_03072PF01418 (PF01380)
445974.CLORAM_01252PF01418(plastid)
445974.CLORAM_00683PF01418 (PF01380)
445974.CLORAM_00684PF01418 (PF01380)
445974.CLORAM_00694PF01418 (PF01380)
445974.CLORAM_00737PF01418 (PF01380)
445974.CLORAM_02354PF01418 (PF01380)
445974.CLORAM_00845PF01418 (PF01380)
445974.CLORAM_02776PF01418 (PF01380)
445974.CLORAM_01469PF01418 (PF01380)
445974.CLORAM_01105PF01418 (PF01380)
445974.CLORAM_00211PF01418 (PF01380)
445974.CLORAM_01676PF01418 (PF01380)
445974.CLORAM_02802PF01418 (PF01380)
445974.CLORAM_00703(PF16656)(ER)
445974.CLORAM_03149PF01418 (PF01380)
445974.CLORAM_01545PF08282(mitochondrial)
445974.CLORAM_01553(PF02357)
445974.CLORAM_01557PF08282
445974.CLORAM_01140PF08282
445974.CLORAM_00384PF00232
445974.CLORAM_00380PF00232
445974.CLORAM_00389(PF01554)
445974.CLORAM_00764(PF02690)
445974.CLORAM_01700PF01418
445974.CLORAM_02804PF00232
445974.CLORAM_00942(PF01554)
445974.CLORAM_02053(PF00365)
445974.CLORAM_01596PF08282
445974.CLORAM_01569PF01418
445974.CLORAM_01396PF00232
445974.CLORAM_01882(PF01554)
445974.CLORAM_01887PF00232
445974.CLORAM_02848PF01418
445974.CLORAM_03134PF00232
445974.CLORAM_03137(PF00834)
445974.CLORAM_03133PF00232
445974.CLORAM_01717(PF13597)
445974.CLORAM_02265(PF03006)
445974.CLORAM_01579PF08282
445974.CLORAM_01573(PF16403)
445974.CLORAM_00748(PF12464)
445974.CLORAM_00365PF00232
445974.CLORAM_00366PF01418
445974.CLORAM_01988(PF01554)
445974.CLORAM_00108(PF01795)
445974.CLORAM_02524(PF05167)
445974.CLORAM_02523(PF05167)
445974.CLORAM_02986PF00232
445974.CLORAM_02455(PF02811)
445974.CLORAM_00962PF08282
445974.CLORAM_00969PF01418
445974.CLORAM_02075PF01418
445974.CLORAM_01211(PF14249)
445974.CLORAM_01172(PF01554)
445974.CLORAM_01170PF08282
445974.CLORAM_01171PF08282
445974.CLORAM_00008(PF12002)
445974.CLORAM_03022PF01418
445974.CLORAM_02512PF00799
445974.CLORAM_03116PF01418
445974.CLORAM_03111PF00232
445974.CLORAM_00914PF08282
445974.CLORAM_02643(PF01554)
445974.CLORAM_02644(PF04794)
445974.CLORAM_02647PF00232
445974.CLORAM_02648(PF00367)
445974.CLORAM_00828PF08282
445974.CLORAM_00826(PF16656)
445974.CLORAM_01510PF08282
445974.CLORAM_00653PF08282
445974.CLORAM_03054(PF12464)
445974.CLORAM_02477PF00232
445974.CLORAM_01697PF00232
445974.CLORAM_02658PF08282
445974.CLORAM_02092(PF12464)
445974.CLORAM_00241(PF02357)
445974.CLORAM_00480(PF01554)
445974.CLORAM_03045(PF00365)
445974.CLORAM_02794(PF12464)
445974.CLORAM_00663PF08282
445974.CLORAM_00662PF08282
445974.CLORAM_00933(PF00834)
445974.CLORAM_00932(PF00367)
445974.CLORAM_01685PF00232
445974.CLORAM_01534PF08282
445974.CLORAM_01533PF08282
445974.CLORAM_02134PF08282
445974.CLORAM_02139PF08282
445974.CLORAM_01225(PF02811)
445974.CLORAM_02785PF08282
445974.CLORAM_02304(PF12646)
445974.CLORAM_01785(PF02811)
445974.CLORAM_01251PF01418
445974.CLORAM_00510PF08282
445974.CLORAM_01339(PF03006)
445974.CLORAM_01029PF00232
445974.CLORAM_01024PF00232
445974.CLORAM_00318(PF01554)
445974.CLORAM_01801PF08282
445974.CLORAM_03085PF00232
445974.CLORAM_02680PF01418
445974.CLORAM_02751(PF03006)
445974.CLORAM_02207(PF01554)
445974.CLORAM_01244PF00232
445974.CLORAM_01245(PF01554)
445974.CLORAM_01246PF00232
445974.CLORAM_01879PF08282
445974.CLORAM_01902PF00232
445974.CLORAM_00055(PF01554)
445974.CLORAM_00052(PF12464)
445974.CLORAM_00697(PF01554)
445974.CLORAM_01491PF00232
445974.CLORAM_01490(PF01554)
445974.CLORAM_00870(PF02357)
445974.CLORAM_02103PF01418
445974.CLORAM_02104PF00232
445974.CLORAM_01310(PF02811)
445974.CLORAM_01002PF08282
445974.CLORAM_01005(PF00367)
445974.CLORAM_01869PF00232
445974.CLORAM_01866PF00232
445974.CLORAM_02355PF00232
445974.CLORAM_02351(PF00365)
445974.CLORAM_00843PF08282
445974.CLORAM_00847PF00232
445974.CLORAM_01464(PF02811)
445974.CLORAM_01468PF00232
445974.CLORAM_03139PF00232
445974.CLORAM_01106(PF12002)
445974.CLORAM_00180PF08282
445974.CLORAM_00181(PF00365)
445974.CLORAM_00210(PF00367)
445974.CLORAM_01928PF08282
445974.CLORAM_00432(PF04794)
445974.CLORAM_00721(PF00882)
445974.CLORAM_00722(PF00882)
445974.CLORAM_03183(PF02811)
445974.CLORAM_03162(PF16472)
445974.CLORAM_03161(PF16472)
445974.CLORAM_01847(PF02811)
445974.CLORAM_00534PF08282
445974.CLORAM_00153PF01418
445974.CLORAM_00400PF01418
445974.CLORAM_00403(PF13597)
445974.CLORAM_00402(PF13597)
445974.CLORAM_00154PF00232
445974.CLORAM_00159(PF00367)
445974.CLORAM_00158(PF02811)
445974.CLORAM_03193PF10401
445974.CLORAM_01662PF00232
445974.CLORAM_02570(PF00834)
445974.CLORAM_01592(PF12681)
445974.CLORAM_00885(PF01380)
445974.CLORAM_00094(PF01121)
445974.CLORAM_00099(PF02811)
445974.CLORAM_00701(PF12681)
445974.CLORAM_03146PF00232
445974.CLORAM_02564(PF07555)
445974.CLORAM_02360PF08282
445974.CLORAM_01721PF03179
445974.CLORAM_01727(PF01991)
445974.CLORAM_02386(PF02811)
445974.CLORAM_02389PF08282
445974.CLORAM_02701PF00232
445974.CLORAM_02149(PF01380)
445974.CLORAM_01047(PF00367)
445974.CLORAM_01044PF00232
445974.CLORAM_01139(PF13597)
445974.CLORAM_01953(PF12002)
445974.CLORAM_00399PF00232
445974.CLORAM_00398(PF00367)
445974.CLORAM_00558PF00232
445974.CLORAM_00775(PF00365)
445974.CLORAM_00774PF00232
445974.CLORAM_00171PF08282
445974.CLORAM_03151PF00232
445974.CLORAM_02824PF00232
445974.CLORAM_02822(PF00367)
445974.CLORAM_01739(PF00367)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================