Metamenu

Effective results for Epulopiscium sp. N.t. morphotype B (eggnog40)

Summary

Number of putative secreted proteins: 44
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 9 eukaryotic-like domains, contained in 44 proteins (22 high, 22 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
420336.Epulo_010100009583(PF13306)ER
420336.Epulo_010100003020(PF00079)ER
420336.Epulo_010100005988PF06467ER
420336.Epulo_010100009328PF06013
420336.Epulo_010100000310PF06013
420336.Epulo_010100000315PF06013
420336.Epulo_010100004034(PF01991)
420336.Epulo_010100009338PF06013
420336.Epulo_010100009333PF06013
420336.Epulo_010100010392(PF13306)
420336.Epulo_010100006333(PF01969)
420336.Epulo_010100009393PF06013
420336.Epulo_010100003462(PF13306)
420336.Epulo_010100007988(PF07892)
420336.Epulo_010100001581(PF13306)
420336.Epulo_010100005379(PF07892)
420336.Epulo_010100006815(PF13306)
420336.Epulo_010100006820(PF13306)
420336.Epulo_010100006825(PF13306)
420336.Epulo_010100009388PF06013
420336.Epulo_010100009383PF06013
420336.Epulo_010100000979(PF09419)
420336.Epulo_010100007763(PF13306)
420336.Epulo_010100001776(PF01409)
420336.Epulo_010100001771(PF01409)
420336.Epulo_010100009363PF06013
420336.Epulo_010100000350PF06013
420336.Epulo_010100003025(PF00079)not used
420336.Epulo_010100001591(PF13306)
420336.Epulo_010100009378PF06013
420336.Epulo_010100010422(PF13306)
420336.Epulo_010100000340PF06013
420336.Epulo_010100000345PF06013
420336.Epulo_010100009268(PF13306)
420336.Epulo_010100009343PF06013
420336.Epulo_010100009348PF06013
420336.Epulo_010100000335PF06013
420336.Epulo_010100000330PF06013
420336.Epulo_010100004630(PF13306)
420336.Epulo_010100009358PF06013
420336.Epulo_010100009353PF06013
420336.Epulo_010100000325PF06013
420336.Epulo_010100000320PF06013
420336.Epulo_010100006338(PF01969)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================