Metamenu

Effective results for Cyanothece sp. PCC 8801 (eggnog40)

Summary

Number of putative secreted proteins: 384
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 148 eukaryotic-like domains, contained in 384 proteins (99 high, 285 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
41431.PCC8801_1857(PF12323) (PF07282)(mitochondrial)
41431.PCC8801_3165(PF13414) (PF00515)ER
41431.PCC8801_3161(PF13414) (PF09295)ER
41431.PCC8801_4435(PF12323) (PF07282)mitochondrial
41431.PCC8801_1098(PF12323) (PF07282)mitochondrial
41431.PCC8801_2948(PF13431) (PF13414)mitochondrial
41431.PCC8801_1300(PF13414) (PF00515)ER
41431.PCC8801_0880(PF12323) (PF07282)(mitochondrial); mitochondrial
41431.PCC8801_1346(PF12323) (PF07282)(mitochondrial)
41431.PCC8801_4201(PF12323) (PF07282)mitochondrial
41431.PCC8801_1159(PF12323) (PF07282)(mitochondrial)
41431.PCC8801_2530(PF13414) (PF00515)ER
41431.PCC8801_3220(PF12323) (PF07282)(mitochondrial)
41431.PCC8801_4156(PF00805) (PF13414)ER; (ER)
41431.PCC8801_0586(PF07282)mitochondrial
41431.PCC8801_0582(PF13414)ER
41431.PCC8801_2531(PF01789)ER
41431.PCC8801_1181(PF07282)(mitochondrial)
41431.PCC8801_0920(PF02163)ER
41431.PCC8801_3901(PF07282)mitochondrial
41431.PCC8801_3166(PF00194)(mitochondrial); mitochondrial
41431.PCC8801_4239(PF13414)ER
41431.PCC8801_1528(PF07282)mitochondrial
41431.PCC8801_0840(PF07282)mitochondrial
41431.PCC8801_3392(PF11016)ER
41431.PCC8801_3390(PF00515)ER
41431.PCC8801_3159(PF05419)ER
41431.PCC8801_2814(PF02163)ER
41431.PCC8801_4410(PF03596)(ER)
41431.PCC8801_3827(PF06514)ER
41431.PCC8801_4400(PF03596)ER
41431.PCC8801_1166(PF13301)ER
41431.PCC8801_2701(PF00805)ER
41431.PCC8801_2126PF08527 (PF03068)(mitochondrial)
41431.PCC8801_3548PF07082(ER)
41431.PCC8801_3055(PF12046)ER
41431.PCC8801_0620(PF13304)(mitochondrial)
41431.PCC8801_0882(PF13414)(mitochondrial)
41431.PCC8801_0089PF05685(mitochondrial)
41431.PCC8801_4091(PF00059)(mitochondrial)
41431.PCC8801_0575(PF00805)ER
41431.PCC8801_0975(PF00194)ER; (ER)
41431.PCC8801_1112(PF13449)ER
41431.PCC8801_2955(PF13304)(mitochondrial)
41431.PCC8801_2486(PF07927)(mitochondrial)
41431.PCC8801_3195(PF13326)ER
41431.PCC8801_1108(PF07282)(mitochondrial)
41431.PCC8801_0211(PF07927)(mitochondrial)
41431.PCC8801_1035PF05685ER; (ER)
41431.PCC8801_2035(PF02163)ER
41431.PCC8801_2673(PF07444)ER
41431.PCC8801_0175(PF07927)(mitochondrial)
41431.PCC8801_4071(PF02931)ER
41431.PCC8801_2939(PF00805)ER
41431.PCC8801_4320(PF11965)(mitochondrial)
41431.PCC8801_1134(PF13414)ER
41431.PCC8801_1137(PF00515)ER
41431.PCC8801_4328(PF01716)ER
41431.PCC8801_2110PF05757ER
41431.PCC8801_3467(PF07444)ER; (ER)
41431.PCC8801_2596(PF11805)ER
41431.PCC8801_2598(PF12049)(ER)
41431.PCC8801_3643(PF13414) (PF00515) (PF13676)
41431.PCC8801_0834PF07082(ER)
41431.PCC8801_2699(PF00805)ER
41431.PCC8801_2473(PF01737)ER
41431.PCC8801_3896(PF02366)ER
41431.PCC8801_3472(PF13449)ER
41431.PCC8801_2306(PF02366)ER
41431.PCC8801_0753(PF02985)ER
41431.PCC8801_1939(PF04483)(mitochondrial)
41431.PCC8801_1803(PF11152)(ER)
41431.PCC8801_1337(PF07282)mitochondrial
41431.PCC8801_2917PF04278ER
41431.PCC8801_2916PF04278ER
41431.PCC8801_1488(PF10716)(ER)
41431.PCC8801_1489(PF11460)ER
41431.PCC8801_4307(PF03092)(mitochondrial)
41431.PCC8801_2046(PF07282)mitochondrial
41431.PCC8801_3402(PF02507)ER
41431.PCC8801_3797PF05685(mitochondrial)
41431.PCC8801_3134(PF00805)ER
41431.PCC8801_0781(PF11909)mitochondrial
41431.PCC8801_0783(PF00805)ER
41431.PCC8801_0815(PF00515)ER
41431.PCC8801_1075(PF13449)ER; (ER)
41431.PCC8801_1074(PF13449)ER
41431.PCC8801_3238(PF07927)(mitochondrial)
41431.PCC8801_1311(PF00610)ER; (ER)
41431.PCC8801_2068(PF13301)ER
41431.PCC8801_2332(PF04481)(mitochondrial)
41431.PCC8801_3206(PF01094)(ER)
41431.PCC8801_3207(PF01241)ER; plastid
41431.PCC8801_3111(PF04423)mitochondrial; (mitochondrial)
41431.PCC8801_4154(PF12323) (PF07282)(mitochondrial)
41431.PCC8801_1457(PF02163)(ER); ER
41431.PCC8801_4012(PF12159)ER
41431.PCC8801_0267PF05685ER
41431.PCC8801_0863(PF08662) (PF12894)(mitochondrial)
41431.PCC8801_1512(PF07927)(mitochondrial)
41431.PCC8801_2356(PF02163)ER
41431.PCC8801_0456(PF01241)plastid
41431.PCC8801_0852(PF07927)(mitochondrial); not used
41431.PCC8801_1430(PF13676)(mitochondrial)
41431.PCC8801_3581(PF12323) (PF07282)
41431.PCC8801_3012(PF12323) (PF07282)
41431.PCC8801_0934(PF12894) (PF13676)
41431.PCC8801_2620PF05685(plastid)
41431.PCC8801_3481(PF03235)(mitochondrial)
41431.PCC8801_1663PF05685(ER)
41431.PCC8801_3701(PF03040)(mitochondrial)
41431.PCC8801_2159(PF00805)(mitochondrial)
41431.PCC8801_0965(PF13431) (PF00515)
41431.PCC8801_0392PF05685(mitochondrial)
41431.PCC8801_0153(PF12323) (PF07282)
41431.PCC8801_1599(PF00101)(mitochondrial)
41431.PCC8801_1750(PF04983)(mitochondrial)
41431.PCC8801_3267(PF13414) (PF00515)
41431.PCC8801_4127(PF07282)(mitochondrial)
41431.PCC8801_3278(PF12600)plastid
41431.PCC8801_3183(PF12323) (PF07282)
41431.PCC8801_0373(PF12323) (PF07282)
41431.PCC8801_1644(PF02468)ER; not used
41431.PCC8801_0521(PF11910)(mitochondrial)
41431.PCC8801_2874(PF12323) (PF07282)
41431.PCC8801_2272(PF05419) (PF13676)
41431.PCC8801_0754(PF16639) (PF01333)
41431.PCC8801_1931(PF12323) (PF07282)
41431.PCC8801_2043(PF10664)(mitochondrial)
41431.PCC8801_3401(PF01701)ER; not used
41431.PCC8801_1565(PF13414)(ER)
41431.PCC8801_4146(PF00283)(ER); not used
41431.PCC8801_4147(PF00284) (PF00283)
41431.PCC8801_2067PF05685(mitochondrial)
41431.PCC8801_2853(PF12323) (PF07282)
41431.PCC8801_3923PF05685(mitochondrial)
41431.PCC8801_1858PF05685
41431.PCC8801_1855PF05685
41431.PCC8801_1852(PF13431)
41431.PCC8801_1850(PF00515)
41431.PCC8801_0076PF05685
41431.PCC8801_4007(PF13359)
41431.PCC8801_0100PF05685
41431.PCC8801_2536PF05685
41431.PCC8801_0857(PF00805)
41431.PCC8801_1501PF05685
41431.PCC8801_1213(PF13246)
41431.PCC8801_1412PF05685
41431.PCC8801_1187PF05685
41431.PCC8801_2742(PF04455)
41431.PCC8801_1723(PF04755)
41431.PCC8801_1727PF05685
41431.PCC8801_2185(PF07282)
41431.PCC8801_3762(PF00805)
41431.PCC8801_0545(PF00805)
41431.PCC8801_1237(PF00124)
41431.PCC8801_1895PF05685
41431.PCC8801_0594PF05685
41431.PCC8801_1143(PF11264)
41431.PCC8801_4290PF05685
41431.PCC8801_4291(PF11267)
41431.PCC8801_0289(PF00805)
41431.PCC8801_4104(PF00223)
41431.PCC8801_1523(PF02943)
41431.PCC8801_1530(PF08417)
41431.PCC8801_2752(PF08853)
41431.PCC8801_2628PF05685
41431.PCC8801_2575(PF12204)
41431.PCC8801_3576(PF08041)not used
41431.PCC8801_3577(PF03912)
41431.PCC8801_2194(PF11623)
41431.PCC8801_3970(PF02171)
41431.PCC8801_3483(PF13911)
41431.PCC8801_2378(PF13676)
41431.PCC8801_3379PF05685
41431.PCC8801_3373PF05685
41431.PCC8801_3395PF05685
41431.PCC8801_3399(PF13359)
41431.PCC8801_3157PF05685
41431.PCC8801_0616(PF04983)
41431.PCC8801_0056(PF00124)
41431.PCC8801_0057PF05685
41431.PCC8801_0122PF05685
41431.PCC8801_0542(PF02392)
41431.PCC8801_1238PF05685
41431.PCC8801_2619(PF03235)
41431.PCC8801_1705(PF08847)
41431.PCC8801_3704(PF00805)
41431.PCC8801_2387PF05685
41431.PCC8801_2815PF05685
41431.PCC8801_3366(PF00805)
41431.PCC8801_3638PF05685
41431.PCC8801_0600(PF08855)
41431.PCC8801_0422(PF02529)not used
41431.PCC8801_1399(PF07282)
41431.PCC8801_4389PF05685
41431.PCC8801_4383(PF06485)
41431.PCC8801_0950(PF00805)
41431.PCC8801_4412(PF12894)
41431.PCC8801_4258(PF13359)
41431.PCC8801_1770(PF13304)
41431.PCC8801_2986(PF13359)
41431.PCC8801_1603(PF02341)
41431.PCC8801_1601PF05685
41431.PCC8801_1604(PF00101)
41431.PCC8801_2395PF03742not used
41431.PCC8801_2809PF05685
41431.PCC8801_2558(PF05419)
41431.PCC8801_3601(PF10184)
41431.PCC8801_3738PF05685
41431.PCC8801_0634(PF10999)
41431.PCC8801_3589(PF10013)not used
41431.PCC8801_0705PF05685
41431.PCC8801_0701(PF05419)
41431.PCC8801_0383(PF00805)
41431.PCC8801_0141(PF00515)
41431.PCC8801_1942(PF03652)
41431.PCC8801_1945PF05685
41431.PCC8801_1385PF05685
41431.PCC8801_1389PF05685
41431.PCC8801_0566(PF13676)
41431.PCC8801_0961PF05685
41431.PCC8801_4404(PF03596)
41431.PCC8801_2946PF05685
41431.PCC8801_2943(PF07927)
41431.PCC8801_1767(PF13301)
41431.PCC8801_1761PF05685
41431.PCC8801_2016(PF00124)
41431.PCC8801_2017PF05685
41431.PCC8801_2706(PF13304)
41431.PCC8801_2703(PF13676)
41431.PCC8801_3945(PF07282)
41431.PCC8801_3834PF05685
41431.PCC8801_3839(PF11347)
41431.PCC8801_2233PF05685
41431.PCC8801_3613(PF13301)
41431.PCC8801_3723(PF02985)
41431.PCC8801_0626(PF13304)
41431.PCC8801_0711(PF16166)
41431.PCC8801_1373PF05685
41431.PCC8801_1289(PF01947)
41431.PCC8801_0970(PF03982)
41431.PCC8801_2954(PF03235)
41431.PCC8801_2480(PF13676)
41431.PCC8801_1624(PF11282)
41431.PCC8801_1620PF05685
41431.PCC8801_3999(PF16095)
41431.PCC8801_2825(PF11317)
41431.PCC8801_3842PF05685
41431.PCC8801_3268(PF00515)
41431.PCC8801_3060(PF05542)
41431.PCC8801_0769(PF08417)
41431.PCC8801_0131(PF02427)
41431.PCC8801_1960(PF00124)
41431.PCC8801_1950(PF00805)
41431.PCC8801_4125(PF00805)
41431.PCC8801_0161PF05685
41431.PCC8801_0162(PF05419)
41431.PCC8801_4082(PF11965)
41431.PCC8801_4088(PF01192)
41431.PCC8801_1106(PF05542)
41431.PCC8801_2929PF05685
41431.PCC8801_3927PF05685
41431.PCC8801_2033(PF11360)
41431.PCC8801_3982(PF02605)
41431.PCC8801_2458PF05685
41431.PCC8801_3529PF05685
41431.PCC8801_3851PF05685
41431.PCC8801_3850(PF00124)
41431.PCC8801_2213(PF07927)
41431.PCC8801_3277(PF02532)not used
41431.PCC8801_3070(PF01405)not used
41431.PCC8801_1915(PF00805)
41431.PCC8801_1910(PF05421)
41431.PCC8801_0379PF05685
41431.PCC8801_0378(PF02531)
41431.PCC8801_4180(PF08975)
41431.PCC8801_4079(PF06485)
41431.PCC8801_4076(PF05419)
41431.PCC8801_0999PF05685
41431.PCC8801_0997(PF02941)
41431.PCC8801_4210PF05685
41431.PCC8801_2736(PF09353)
41431.PCC8801_1647(PF11833)
41431.PCC8801_1645(PF00737)
41431.PCC8801_2440(PF00805)
41431.PCC8801_2447PF05685
41431.PCC8801_2023PF05685
41431.PCC8801_2027PF05685
41431.PCC8801_3514(PF07927)
41431.PCC8801_2593(PF11051)
41431.PCC8801_3860(PF00805)
41431.PCC8801_2200PF05685
41431.PCC8801_3885(PF10162)
41431.PCC8801_3640(PF12527)
41431.PCC8801_0748(PF13304)
41431.PCC8801_0698(PF00515)
41431.PCC8801_0693PF05685
41431.PCC8801_0112(PF00805)
41431.PCC8801_4103(PF00223)
41431.PCC8801_1344PF05115not used
41431.PCC8801_0837PF05685
41431.PCC8801_2695PF05685
41431.PCC8801_2055(PF01192)
41431.PCC8801_3506(PF03235)
41431.PCC8801_2879PF05685
41431.PCC8801_3874(PF00805)
41431.PCC8801_3895PF05685
41431.PCC8801_3478(PF11378)
41431.PCC8801_2300(PF03235)
41431.PCC8801_3258PF05685
41431.PCC8801_2304(PF00805)
41431.PCC8801_3250(PF13355)
41431.PCC8801_3099(PF06298)not used
41431.PCC8801_3655(PF04839)
41431.PCC8801_3652(PF02672)
41431.PCC8801_3651PF05685
41431.PCC8801_3650PF05685
41431.PCC8801_1141(PF01744)
41431.PCC8801_0752(PF00805)
41431.PCC8801_0533(PF02533)not used
41431.PCC8801_2911(PF11998)
41431.PCC8801_1066(PF09366)
41431.PCC8801_1060(PF00515)
41431.PCC8801_1485(PF04755)
41431.PCC8801_1460(PF13304)
41431.PCC8801_1660(PF07927)
41431.PCC8801_2465PF05685
41431.PCC8801_2861(PF05151)not used
41431.PCC8801_2268PF05685
41431.PCC8801_3228(PF02366)
41431.PCC8801_3130(PF00805)
41431.PCC8801_3131(PF05419)
41431.PCC8801_0329(PF13414)
41431.PCC8801_1255PF05685
41431.PCC8801_1321PF05685
41431.PCC8801_1078(PF14249)
41431.PCC8801_4313(PF04970)
41431.PCC8801_3303(PF14622)
41431.PCC8801_3414PF05685
41431.PCC8801_3419(PF00805)
41431.PCC8801_2283(PF11947)
41431.PCC8801_3801(PF11341)
41431.PCC8801_1869PF05685
41431.PCC8801_0024PF05685
41431.PCC8801_4030PF05685
41431.PCC8801_4144(PF01788)not used
41431.PCC8801_4145PF02419not used
41431.PCC8801_2664(PF10063)
41431.PCC8801_2406PF05685
41431.PCC8801_2060(PF03652)
41431.PCC8801_2882(PF13359)
41431.PCC8801_3425(PF08854)
41431.PCC8801_3119(PF06799)
41431.PCC8801_0497(PF11371)
41431.PCC8801_1879PF12873
41431.PCC8801_0472(PF13304)
41431.PCC8801_1272PF05685
41431.PCC8801_0900(PF13304)
41431.PCC8801_1052(PF12095)
41431.PCC8801_2505(PF00805)
41431.PCC8801_1317PF05685
41431.PCC8801_3929(PF09366)
41431.PCC8801_2437PF00305
41431.PCC8801_3216(PF00124)
41431.PCC8801_3323PF05685
41431.PCC8801_3697(PF13246)
41431.PCC8801_3106PF00305
41431.PCC8801_0645(PF14622)
41431.PCC8801_1841(PF12452)
41431.PCC8801_0002PF05685
41431.PCC8801_4011(PF10693)
41431.PCC8801_4014(PF10674)
41431.PCC8801_0467PF05685
41431.PCC8801_1202(PF12617)
41431.PCC8801_1209(PF03912)
41431.PCC8801_4342(PF13676)
41431.PCC8801_4343PF05685
41431.PCC8801_4346(PF11210)
41431.PCC8801_1198PF05685
41431.PCC8801_0914(PF02672)
41431.PCC8801_3591(PF05969)not used
41431.PCC8801_2515PF05685
41431.PCC8801_3774(PF04970)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================