Metamenu

Effective results for Bacillus weihenstephanensis KBAB4 (eggnog40)

Summary

Number of putative secreted proteins: 181
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 46 eukaryotic-like domains, contained in 181 proteins (16 high, 165 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
315730.BcerKBAB4_0520(PF01773) (PF07662)ER
315730.BcerKBAB4_5028(PF01773) (PF07662)ER
315730.BcerKBAB4_4884(PF01773) (PF07662)ER
315730.BcerKBAB4_4883(PF01773) (PF07662)ER
315730.BcerKBAB4_4888(PF13402) (PF03272)ER
315730.BcerKBAB4_1753(PF01773) (PF07662)ER
315730.BcerKBAB4_0312(PF01773) (PF07662)ER
315730.BcerKBAB4_2787(PF01773) (PF07662)ER
315730.BcerKBAB4_5182(PF00768)ER
315730.BcerKBAB4_4906(PF13127)ER
315730.BcerKBAB4_1190(PF00768)ER
315730.BcerKBAB4_0244(PF02517)ER
315730.BcerKBAB4_0009(PF00768)ER
315730.BcerKBAB4_2417(PF09752)(mitochondrial)
315730.BcerKBAB4_2412(PF00344)mitochondrial; (mitochondrial)
315730.BcerKBAB4_0870(PF04892)ER
315730.BcerKBAB4_2063(PF03717)ER
315730.BcerKBAB4_1283(PF02517)ER
315730.BcerKBAB4_1601(PF04892)ER
315730.BcerKBAB4_1818(PF00768)ER
315730.BcerKBAB4_0721(PF06803)mitochondrial
315730.BcerKBAB4_3134(PF02517)ER
315730.BcerKBAB4_4837(PF00768)ER
315730.BcerKBAB4_5233(PF03788)ER
315730.BcerKBAB4_5232(PF04172)ER
315730.BcerKBAB4_4610(PF09962)ER
315730.BcerKBAB4_1392(PF00768)ER
315730.BcerKBAB4_3890(PF13673)mitochondrial
315730.BcerKBAB4_5033(PF06725)ER
315730.BcerKBAB4_3692(PF04127)ER
315730.BcerKBAB4_3525(PF03788)ER
315730.BcerKBAB4_3524(PF04172)ER
315730.BcerKBAB4_2329(PF03717)ER
315730.BcerKBAB4_3532(PF00388)ER
315730.BcerKBAB4_2488(PF03717)ER
315730.BcerKBAB4_2484(PF04892)ER
315730.BcerKBAB4_2315(PF00768)ER
315730.BcerKBAB4_2319(PF04892)ER
315730.BcerKBAB4_1024(PF02517)ER
315730.BcerKBAB4_1688(PF00965)ER
315730.BcerKBAB4_1756PF11070ER
315730.BcerKBAB4_5040(PF04892)ER
315730.BcerKBAB4_4225(PF03717)ER
315730.BcerKBAB4_3227PF11070ER
315730.BcerKBAB4_2371(PF00768)ER
315730.BcerKBAB4_2208(PF01156)(ER)
315730.BcerKBAB4_0226(PF03851)(mitochondrial)
315730.BcerKBAB4_4202(PF08662)ER
315730.BcerKBAB4_0549(PF02517)ER
315730.BcerKBAB4_2966(PF02517)ER
315730.BcerKBAB4_0125(PF00344)mitochondrial
315730.BcerKBAB4_3481(PF06725)ER
315730.BcerKBAB4_4924(PF04172)ER
315730.BcerKBAB4_4925(PF03788)ER
315730.BcerKBAB4_0595(PF04892)ER
315730.BcerKBAB4_0599(PF06725)ER
315730.BcerKBAB4_3743(PF03717)ER
315730.BcerKBAB4_3742(PF03717)ER
315730.BcerKBAB4_2504(PF03717)ER
315730.BcerKBAB4_3906(PF00768)ER
315730.BcerKBAB4_0588(PF03209)ER
315730.BcerKBAB4_0698(PF03209)(mitochondrial)
315730.BcerKBAB4_3355(PF03788)ER
315730.BcerKBAB4_3356(PF04172)ER
315730.BcerKBAB4_4622(PF12606)ER; not used
315730.BcerKBAB4_5145(PF03851)(mitochondrial)
315730.BcerKBAB4_2864(PF03717)(ER)
315730.BcerKBAB4_4448(PF12746)(mitochondrial)
315730.BcerKBAB4_2335(PF13402) (PF03272)
315730.BcerKBAB4_2330(PF03717)(ER)
315730.BcerKBAB4_5022(PF06803)(mitochondrial)
315730.BcerKBAB4_0182(PF14748)(mitochondrial)
315730.BcerKBAB4_2993(PF02517)(mitochondrial)
315730.BcerKBAB4_2347(PF00388)(ER)
315730.BcerKBAB4_1185(PF13271)(plastid)
315730.BcerKBAB4_2402(PF02517)
315730.BcerKBAB4_4768(PF02517)
315730.BcerKBAB4_2258PF01391
315730.BcerKBAB4_2413(PF12867)
315730.BcerKBAB4_5178(PF13921)
315730.BcerKBAB4_4396(PF02517)
315730.BcerKBAB4_3929(PF04229)
315730.BcerKBAB4_0478(PF12746)
315730.BcerKBAB4_0012(PF02403)
315730.BcerKBAB4_0707(PF06725)
315730.BcerKBAB4_3736(PF02873)
315730.BcerKBAB4_4569(PF13673)
315730.BcerKBAB4_2397(PF01432)
315730.BcerKBAB4_2467(PF01156)
315730.BcerKBAB4_4367(PF09962)
315730.BcerKBAB4_1043(PF08713)
315730.BcerKBAB4_2726(PF04127)
315730.BcerKBAB4_2728(PF13673)
315730.BcerKBAB4_3254(PF01156)
315730.BcerKBAB4_4557PF01391
315730.BcerKBAB4_2473(PF13673)
315730.BcerKBAB4_2278(PF06803)
315730.BcerKBAB4_4926(PF01156)
315730.BcerKBAB4_4602PF01391
315730.BcerKBAB4_4735(PF08713)
315730.BcerKBAB4_1380PF01391
315730.BcerKBAB4_1253(PF12867)
315730.BcerKBAB4_2669(PF13673)
315730.BcerKBAB4_2668(PF12867)
315730.BcerKBAB4_2444(PF13673)
315730.BcerKBAB4_2443(PF12867)
315730.BcerKBAB4_2280PF01391
315730.BcerKBAB4_1933(PF13673)
315730.BcerKBAB4_3090(PF09295)
315730.BcerKBAB4_2877(PF08713)
315730.BcerKBAB4_2707(PF03630)
315730.BcerKBAB4_3477PF01391
315730.BcerKBAB4_2672(PF01432)
315730.BcerKBAB4_2458(PF13673)
315730.BcerKBAB4_4195(PF13673)
315730.BcerKBAB4_4829(PF02517)
315730.BcerKBAB4_3085(PF13673)
315730.BcerKBAB4_2849(PF04229)
315730.BcerKBAB4_2597(PF13673)
315730.BcerKBAB4_2607(PF13673)
315730.BcerKBAB4_2609PF01391
315730.BcerKBAB4_4187(PF09419)
315730.BcerKBAB4_1134(PF13673)
315730.BcerKBAB4_1918(PF13673)
315730.BcerKBAB4_2858(PF08713)
315730.BcerKBAB4_3182PF01166
315730.BcerKBAB4_3071(PF12867)
315730.BcerKBAB4_2583(PF04229)
315730.BcerKBAB4_3451(PF08761)
315730.BcerKBAB4_2321(PF03717)
315730.BcerKBAB4_1102(PF01432)
315730.BcerKBAB4_1745(PF01156)
315730.BcerKBAB4_0612(PF13673)
315730.BcerKBAB4_0982PF11766
315730.BcerKBAB4_2924(PF12867)
315730.BcerKBAB4_3190(PF12867)
315730.BcerKBAB4_3202(PF01432)
315730.BcerKBAB4_2625(PF01432)
315730.BcerKBAB4_2131PF01391
315730.BcerKBAB4_4899(PF02873)
315730.BcerKBAB4_1117PF01391
315730.BcerKBAB4_2494(PF04229)
315730.BcerKBAB4_4458(PF12867)
315730.BcerKBAB4_4403(PF08761)
315730.BcerKBAB4_1945(PF12746)
315730.BcerKBAB4_1944(PF13673)
315730.BcerKBAB4_1942(PF13673)
315730.BcerKBAB4_0413(PF06803)
315730.BcerKBAB4_2806(PF00386)
315730.BcerKBAB4_3224(PF04229)
315730.BcerKBAB4_2791(PF14748)
315730.BcerKBAB4_2378(PF13673)
315730.BcerKBAB4_2579(PF12867)
315730.BcerKBAB4_5250(PF01432)
315730.BcerKBAB4_4126(PF03717)
315730.BcerKBAB4_0313(PF02475)
315730.BcerKBAB4_1794(PF13673)
315730.BcerKBAB4_0951(PF04892)
315730.BcerKBAB4_2975(PF12867)
315730.BcerKBAB4_1408(PF02517)
315730.BcerKBAB4_2784(PF12867)
315730.BcerKBAB4_3495(PF13673)
315730.BcerKBAB4_2217(PF13673)
315730.BcerKBAB4_3813PF10058not used
315730.BcerKBAB4_0238(PF13673)
315730.BcerKBAB4_3969(PF14748)
315730.BcerKBAB4_2730(PF12867)
315730.BcerKBAB4_2734(PF08713)
315730.BcerKBAB4_2681(PF12746)
315730.BcerKBAB4_3572PF01391
315730.BcerKBAB4_4211(PF13673)
315730.BcerKBAB4_4744(PF06725)
315730.BcerKBAB4_3749(PF13921)
315730.BcerKBAB4_2695(PF01156)
315730.BcerKBAB4_2766(PF12867)
315730.BcerKBAB4_2237(PF02517)
315730.BcerKBAB4_4355PF01391
315730.BcerKBAB4_4179(PF14748)
315730.BcerKBAB4_1184(PF13271)
315730.BcerKBAB4_2759(PF06725)
315730.BcerKBAB4_2756(PF02403)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================