Metamenu

Effective results for Streptococcus anginosus SK52 = DSM 20563 (eggnog40)

Summary

Number of putative secreted proteins: 84
- Predicted by T4SEpre: 99
- Predicted by EffectiveELD: 3 eukaryotic-like domains, contained in 4 proteins (2 high, 2 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type IV)

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
1000570.HMPREF9966_0407+ER
1000570.HMPREF9966_0085+ER
1000570.HMPREF9966_0081+ER
1000570.HMPREF9966_1859+ER
1000570.HMPREF9966_0333+ER
1000570.HMPREF9966_0436+ER
1000570.HMPREF9966_1467+(ER)
1000570.HMPREF9966_1319+(mitochondrial)
1000570.HMPREF9966_0689+(ER); ER
1000570.HMPREF9966_1526+ER
1000570.HMPREF9966_0230+ER
1000570.HMPREF9966_1403+(mitochondrial)
1000570.HMPREF9966_1625+ER
1000570.HMPREF9966_1761+ER
1000570.HMPREF9966_0219+ER
1000570.HMPREF9966_0108+ER
1000570.HMPREF9966_0369+ER
1000570.HMPREF9966_0556+ER
1000570.HMPREF9966_1949+(mitochondrial)
1000570.HMPREF9966_1495(PF02938)mitochondrial; (mitochondrial)
1000570.HMPREF9966_1920+ER
1000570.HMPREF9966_1552+ER
1000570.HMPREF9966_1555+(mitochondrial)
1000570.HMPREF9966_0463+ER
1000570.HMPREF9966_0541+(ER)
1000570.HMPREF9966_1053+ER
1000570.HMPREF9966_0184+ER
1000570.HMPREF9966_1634+PF00910
1000570.HMPREF9966_1875+plastid
1000570.HMPREF9966_1535PF02916(ER)
1000570.HMPREF9966_1048+
1000570.HMPREF9966_0269+
1000570.HMPREF9966_0667+
1000570.HMPREF9966_1919+
1000570.HMPREF9966_0088+
1000570.HMPREF9966_1853(PF02938)
1000570.HMPREF9966_1854+
1000570.HMPREF9966_0094+
1000570.HMPREF9966_1524+
1000570.HMPREF9966_0282+
1000570.HMPREF9966_1308+
1000570.HMPREF9966_1780+
1000570.HMPREF9966_0650+
1000570.HMPREF9966_1651+
1000570.HMPREF9966_1790+
1000570.HMPREF9966_0135+
1000570.HMPREF9966_0220+
1000570.HMPREF9966_1084+
1000570.HMPREF9966_0918+
1000570.HMPREF9966_1639+
1000570.HMPREF9966_1102+
1000570.HMPREF9966_1644+
1000570.HMPREF9966_0971+
1000570.HMPREF9966_0008+
1000570.HMPREF9966_0585+
1000570.HMPREF9966_0562+
1000570.HMPREF9966_0106+
1000570.HMPREF9966_1191+
1000570.HMPREF9966_1289+
1000570.HMPREF9966_1357+
1000570.HMPREF9966_1164+
1000570.HMPREF9966_1564+
1000570.HMPREF9966_1704+
1000570.HMPREF9966_0166+
1000570.HMPREF9966_0945+
1000570.HMPREF9966_0836+
1000570.HMPREF9966_1179+not used
1000570.HMPREF9966_1860+
1000570.HMPREF9966_0713+
1000570.HMPREF9966_1817+
1000570.HMPREF9966_1815+
1000570.HMPREF9966_1921+
1000570.HMPREF9966_1113+
1000570.HMPREF9966_0738+
1000570.HMPREF9966_0248+
1000570.HMPREF9966_0762+
1000570.HMPREF9966_1583+
1000570.HMPREF9966_1588+
1000570.HMPREF9966_1232+
1000570.HMPREF9966_0614+
1000570.HMPREF9966_0613+
1000570.HMPREF9966_0874+
1000570.HMPREF9966_1339+
1000570.HMPREF9966_1593+

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0 (0/0 KEGG proteins)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================