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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cenocepacia
Taxonomyid:
95486
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_006486033.1
porin
WP_006486121.1
porin
WP_006486676.1
porin
WP_006487141.1
porin
WP_006491111.1
porin
WP_006491809.1
porin
WP_006491862.1
porin
WP_006494947.1
porin
WP_006496345.1
porin
WP_006496423.1
porin
WP_006497684.1
porin
WP_012492356.1
porin
WP_034200718.1
porin
WP_034202179.1
porin
WP_034202414.1
porin
WP_034202736.1
porin
WP_034204104.1
porin
WP_043204478.1
porin
WP_043204954.1
porin
WP_048984255.1
porin
WP_048985105.1
porin
WP_048989202.1
porin
WP_058902765.1
porin
WP_058902795.1
porin
WP_058903019.1
porin
WP_060268261.1
porin
WP_062885507.1
porin
WP_077021125.1
porin
WP_077056913.1
porin
WP_077175679.1
porin
WP_080322314.1
porin
WP_080322782.1
porin
WP_080324515.1
porin
WP_080330854.1
porin
WP_084749952.1
porin
WP_084750320.1
hypothetical protein
WP_084751034.1
porin
WP_084751155.1
porin
WP_084751216.1
porin
WP_084751505.1
porin
WP_084751532.1
hypothetical protein
WP_084751584.1
porin
WP_084751823.1
porin
WP_084751887.1
hypothetical protein
WP_084751993.1
porin
WP_084752588.1
porin
WP_084752808.1
porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
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contact.cube@univie.ac.at