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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cenocepacia
Taxonomyid:
95486
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_006482966.1
porin
WP_006483801.1
porin
WP_006484850.1
porin
WP_006486033.1
porin
WP_006486121.1
porin
WP_006486676.1
porin
WP_006487141.1
porin
WP_006488818.1
porin
WP_006489833.1
porin
WP_006490059.1
porin
WP_006491111.1
porin
WP_006491809.1
porin
WP_006491862.1
porin
WP_006494947.1
porin
WP_012492356.1
porin
WP_034200806.1
porin
WP_034202414.1
porin
WP_034202728.1
porin
WP_034204104.1
porin
WP_060264126.1
porin
WP_077056913.1
porin
WP_077188691.1
porin
WP_077188783.1
porin
WP_077189057.1
porin
WP_077189061.1
porin
WP_077189144.1
porin
WP_077189222.1
porin
WP_077189268.1
porin
WP_077189317.1
porin
WP_077189347.1
porin
WP_077189585.1
porin
WP_077189619.1
porin
WP_077189872.1
porin
WP_077189992.1
porin
WP_077190050.1
porin
WP_077190199.1
porin
WP_077190321.1
porin
WP_077190353.1
porin
WP_077190672.1
porin
WP_077190832.1
porin
WP_077190844.1
porin
WP_077190973.1
porin
WP_077191046.1
porin
WP_077191087.1
porin
WP_077199944.1
outer membrane porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
Contact
+43 1 4277 76681
+43 1 4277 876681
contact.cube@univie.ac.at