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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_048242476.1
porin
WP_048242513.1
porin
WP_048242676.1
porin
WP_048242993.1
porin
WP_048243033.1
porin
WP_048243051.1
porin
WP_048243320.1
porin
WP_048245311.1
porin
WP_048245378.1
porin
WP_048245398.1
porin
WP_048245487.1
porin
WP_048245531.1
porin
WP_048245682.1
porin
WP_048245710.1
porin
WP_048245723.1
porin
WP_048245776.1
porin
WP_048245893.1
porin
WP_048245948.1
porin
WP_048246161.1
porin
WP_048246340.1
porin
WP_048246490.1
porin
WP_048246504.1
porin
WP_048246523.1
porin
WP_048246537.1
porin
WP_048246643.1
porin
WP_048246675.1
porin
WP_048247264.1
porin
WP_048247362.1
porin
WP_048247473.1
porin
WP_048247776.1
porin
WP_048247998.1
porin
WP_048248059.1
porin
WP_048248261.1
porin
WP_048248353.1
porin
WP_048248504.1
porin
WP_048248985.1
porin
WP_048248988.1
porin
WP_048249079.1
porin
WP_048249169.1
porin
WP_048249184.1
porin
WP_048249457.1
porin
WP_048249684.1
porin
WP_048249800.1
porin
WP_048250062.1
porin
WP_048250093.1
porin
WP_048250460.1
porin
WP_048250620.1
porin
WP_048251806.1
porin
WP_048251977.1
porin
WP_048252125.1
porin
WP_048252157.1
porin
WP_053077563.1
porin
WP_053077609.1
porin
WP_063778197.1
porin
WP_080970775.1
porin
WP_080970877.1
hypothetical protein
WP_080970924.1
hypothetical protein
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
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contact.cube@univie.ac.at