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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Gepard
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_006498910.1
porin
WP_011353454.1
porin
WP_021156477.1
porin
WP_021156897.1
porin
WP_021157443.1
porin
WP_021158488.1
porin
WP_021159191.1
porin
WP_021159262.1
porin
WP_021159922.1
porin
WP_021161058.1
porin
WP_021161184.1
porin
WP_021161478.1
porin
WP_021162030.1
porin
WP_021163930.1
porin
WP_042975541.1
porin
WP_042976882.1
porin
WP_048021672.1
porin
WP_048025892.1
porin
WP_048027012.1
porin
WP_048027123.1
porin
WP_048027166.1
porin
WP_048027485.1
porin
WP_059488534.1
porin
WP_059494794.1
porin
WP_059552336.1
porin
WP_059622391.1
porin
WP_059677458.1
porin
WP_059811928.1
porin
WP_059854672.1
porin
WP_060065244.1
porin
WP_060068373.1
porin
WP_060341193.1
porin
WP_060341323.1
porin
WP_060341402.1
porin
WP_060341506.1
porin
WP_060341575.1
porin
WP_060341643.1
porin
WP_060341658.1
porin
WP_060341685.1
porin
WP_060341750.1
porin
WP_060341767.1
porin
WP_060341816.1
porin
WP_060341855.1
porin
WP_060341966.1
porin
WP_060342077.1
porin
WP_060342123.1
porin
WP_060342176.1
porin
WP_060342278.1
porin
WP_060342367.1
porin
WP_060342394.1
porin
WP_060342595.1
porin
WP_060342636.1
porin
WP_060343291.1
porin
WP_060343329.1
porin
WP_060343701.1
porin
WP_060343848.1
porin
WP_060343973.1
porin
WP_060344079.1
porin
WP_060344142.1
porin
WP_063808136.1
porin
WP_081082681.1
hypothetical protein
WP_081082696.1
hypothetical protein
WP_081082718.1
porin
WP_081082730.1
porin
WP_081082752.1
porin
WP_081082811.1
porin
WP_081082956.1
hypothetical protein
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
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contact.cube@univie.ac.at