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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_011353454.1
porin
WP_021156477.1
porin
WP_021156938.1
porin
WP_021157443.1
porin
WP_021158488.1
porin
WP_021158633.1
3-hydroxyphenylpropionic acid porin
WP_021159191.1
porin
WP_021159922.1
porin
WP_021160032.1
porin
WP_021160535.1
porin
WP_021161184.1
porin
WP_021161478.1
porin
WP_021162030.1
porin
WP_021162293.1
porin
WP_021163930.1
porin
WP_027790439.1
porin
WP_042974289.1
porin
WP_042975541.1
porin
WP_042976372.1
porin
WP_048020989.1
porin
WP_048021672.1
porin
WP_048021900.1
porin
WP_048025427.1
porin
WP_059484266.1
porin
WP_059488534.1
porin
WP_059492309.1
porin
WP_059494810.1
porin
WP_059589398.1
porin
WP_059622391.1
porin
WP_059624251.1
porin
WP_059813132.1
porin
WP_059813286.1
porin
WP_059814834.1
porin
WP_060083031.1
porin
WP_060217280.1
porin
WP_060217687.1
porin
WP_060217854.1
porin
WP_060217874.1
porin
WP_060217907.1
porin
WP_060217920.1
porin
WP_060218220.1
porin
WP_060218279.1
porin
WP_060218420.1
porin
WP_060218598.1
porin
WP_060218809.1
porin
WP_060219002.1
porin
WP_060219550.1
porin
WP_060219635.1
porin
WP_060219715.1
porin
WP_060219795.1
porin
WP_081071542.1
hypothetical protein
WP_081071753.1
porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
Contact
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contact.cube@univie.ac.at