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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_021162293.1
porin
WP_027788458.1
porin
WP_027788931.1
porin
WP_027788965.1
porin
WP_027789445.1
porin
WP_027789718.1
porin
WP_027790412.1
porin
WP_027790560.1
porin
WP_027791162.1
porin
WP_027791358.1
porin
WP_027791462.1
porin
WP_027791906.1
porin
WP_059488534.1
porin
WP_059622741.1
porin
WP_059682162.1
porin
WP_059693767.1
porin
WP_059694927.1
porin
WP_059697066.1
porin
WP_060082546.1
porin
WP_060083031.1
porin
WP_060083153.1
porin
WP_060083188.1
porin
WP_060083254.1
porin
WP_060083267.1
porin
WP_060083336.1
porin
WP_060083361.1
porin
WP_060083660.1
porin
WP_060083827.1
porin
WP_060083879.1
porin
WP_060083963.1
porin
WP_060084217.1
porin
WP_060084244.1
porin
WP_060084293.1
porin
WP_060084391.1
porin
WP_060084559.1
porin
WP_060084624.1
porin
WP_060084763.1
porin
WP_060085173.1
porin
WP_060085311.1
porin
WP_060085618.1
porin
WP_060085638.1
porin
WP_060085703.1
porin
WP_060085752.1
porin
WP_060085842.1
porin
WP_060085935.1
porin
WP_060086093.1
porin
WP_060086314.1
porin
WP_060086415.1
porin
WP_060086540.1
porin
WP_081066324.1
porin
WP_081076344.1
porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
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contact.cube@univie.ac.at