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University of Vienna
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Dept of Microbiology and Ecosystem Science
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Eukaryotic like proteins
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Genome: Burkholderia cepacia
Taxonomyid:
292
Class: s (p=pathogen;s=symbiont)
Domain:
PF13609
Copy number in non-pathogens:
Mean=1.65 Stddev=6.68
Proteins containing this domain:
accession
genenames
locustags
description
WP_011353454.1
porin
WP_021156938.1
porin
WP_021158238.1
porin
WP_021160709.1
porin
WP_027788458.1
porin
WP_027788965.1
porin
WP_027789718.1
porin
WP_027790253.1
porin
WP_027790412.1
porin
WP_034195856.1
porin
WP_042976372.1
porin
WP_059622741.1
porin
WP_059681938.1
porin
WP_059681949.1
porin
WP_059683025.1
porin
WP_059683362.1
porin
WP_059683445.1
porin
WP_059683583.1
porin
WP_059683982.1
porin
WP_059684331.1
porin
WP_059685341.1
porin
WP_059686014.1
porin
WP_059686493.1
porin
WP_059687572.1
porin
WP_059687933.1
porin
WP_059688249.1
porin
WP_060060682.1
porin
WP_060060828.1
porin
WP_060061240.1
porin
WP_060061241.1
porin
WP_060061516.1
porin
WP_060061849.1
porin
WP_060061888.1
porin
WP_060063075.1
porin
WP_060064536.1
porin
WP_060064691.1
porin
WP_060064874.1
porin
WP_060064965.1
porin
WP_060065033.1
porin
WP_060065165.1
porin
WP_060065244.1
porin
WP_060065743.1
porin
WP_060066412.1
porin
WP_060067207.1
porin
WP_060067698.1
porin
WP_060067784.1
porin
WP_060067804.1
porin
WP_060067816.1
porin
WP_060067886.1
porin
WP_060068206.1
porin
WP_060068237.1
porin
WP_060068328.1
porin
WP_060068373.1
porin
WP_060068392.1
porin
WP_063806881.1
porin
WP_081075808.1
porin
WP_081075830.1
hypothetical protein
WP_081076043.1
hypothetical protein
WP_081076049.1
porin
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
Contact
+43 1 4277 76681
+43 1 4277 876681
contact.cube@univie.ac.at